RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 KRI1Q8N9T8 703 aaKnown RBP7.97□□□□□ -1.13
ATXN3-230ENST00000554673 PMFBP1Q8TBY8 1022 aa7.97□□□□□ -1.13
ATXN3-230ENST00000554673 DDX17Q92841 729 aaKnown RBP7.97□□□□□ -1.13
ATXN3-230ENST00000554673 SLIT3O75094 1523 aa7.97□□□□□ -1.13
ATXN3-230ENST00000554673 PNPLA6Q8IY17 1366 aa7.97□□□□□ -1.13
ATXN3-230ENST00000554673 CERKQ8TCT0 537 aa7.96□□□□□ -1.14
ATXN3-230ENST00000554673 FAM117AQ9C073 453 aa7.96□□□□□ -1.14
ATXN3-230ENST00000554673 CDHR5Q9HBB8 845 aa7.96□□□□□ -1.14
ATXN3-230ENST00000554673 TTC21BQ7Z4L5 1316 aa7.96□□□□□ -1.14
ATXN3-230ENST00000554673 USP31Q70CQ4 1352 aa7.96□□□□□ -1.14
ATXN3-230ENST00000554673 LMO7Q8WWI1 1683 aa7.95□□□□□ -1.14
ATXN3-230ENST00000554673 CAMTA1Q9Y6Y1 1673 aa7.95□□□□□ -1.14
ATXN3-230ENST00000554673 SPDYE16A6NNV3 312 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-230ENST00000554673 APBB1O00213 710 aa7.95□□□□□ -1.14
ATXN3-230ENST00000554673 CDCA8Q53HL2 280 aa7.95□□□□□ -1.14
ATXN3-230ENST00000554673 NLRP13Q86W25 1043 aa7.95□□□□□ -1.14
ATXN3-230ENST00000554673 FAM208AQ9UK61 1670 aaKnown RBP7.95□□□□□ -1.14
ATXN3-230ENST00000554673 TNNT2P45379 298 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-230ENST00000554673 FLIIQ13045 1269 aa7.94□□□□□ -1.14
ATXN3-230ENST00000554673 SWT1Q5T5J6 900 aaKnown RBP7.94□□□□□ -1.14
ATXN3-230ENST00000554673 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.94□□□□□ -1.14
ATXN3-230ENST00000554673 FAM9BQ8IZU0 186 aa7.94□□□□□ -1.14
ATXN3-230ENST00000554673 POLKQ9UBT6 870 aa7.94□□□□□ -1.14
ATXN3-230ENST00000554673 ADAMTS8Q9UP79 889 aa7.94□□□□□ -1.14
ATXN3-230ENST00000554673 KNSTRNQ9Y448 316 aa7.94□□□□□ -1.14
ATXN3-230ENST00000554673 EMILIN1Q9Y6C2 1016 aa7.94□□□□□ -1.14
ATXN3-230ENST00000554673 ZNF521Q96K83 1311 aa7.94□□□□□ -1.14
ATXN3-230ENST00000554673 INSRP06213 1382 aa7.94□□□□□ -1.14
ATXN3-230ENST00000554673 CDK12Q9NYV4 1490 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-230ENST00000554673 GPR37O15354 613 aa7.93□□□□□ -1.14
ATXN3-230ENST00000554673 MTHFSP49914 203 aa7.93□□□□□ -1.14
ATXN3-230ENST00000554673 NECTIN2Q92692 538 aa7.93□□□□□ -1.14
ATXN3-230ENST00000554673 CCDC9Q9Y3X0 531 aaKnown RBP7.93□□□□□ -1.14
ATXN3-230ENST00000554673 NSD2O96028 1365 aa7.93□□□□□ -1.14
ATXN3-230ENST00000554673 DCCP43146 1447 aa7.93□□□□□ -1.14
ATXN3-230ENST00000554673 COL16A1Q07092 1604 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-230ENST00000554673 ROBO1Q9Y6N7 1651 aa7.92□□□□□ -1.14
ATXN3-230ENST00000554673 PDIA4P13667 645 aaKnown RBP7.92□□□□□ -1.14
ATXN3-230ENST00000554673 XPCQ01831 940 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-230ENST00000554673 PKDCCQ504Y2 493 aa7.92□□□□□ -1.14
ATXN3-230ENST00000554673 PROSER2Q86WR7 435 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-230ENST00000554673 SHANK3Q9BYB0 1731 aa7.92□□□□□ -1.14
ATXN3-230ENST00000554673 ZBTB7CA1YPR0 619 aa7.91□□□□□ -1.14
ATXN3-230ENST00000554673 RRS1Q15050 365 aaKnown RBP7.91□□□□□ -1.14
ATXN3-230ENST00000554673 CGNL1Q0VF96 1302 aa7.91□□□□□ -1.14
ATXN3-230ENST00000554673 AATKQ6ZMQ8 1374 aa7.91□□□□□ -1.14
ATXN3-230ENST00000554673 NCOA3Q9Y6Q9 1424 aa7.9□□□□□ -1.14
ATXN3-230ENST00000554673 A6NJR5 290 aa7.9□□□□□ -1.14
ATXN3-230ENST00000554673 ZPR1O75312 459 aa7.9□□□□□ -1.14
ATXN3-230ENST00000554673 SLC19A1P41440 591 aa7.9□□□□□ -1.14
ATXN3-230ENST00000554673 SLF2Q8IX21 1173 aa7.9□□□□□ -1.14
ATXN3-230ENST00000554673 DDRGK1Q96HY6 314 aa7.9□□□□□ -1.14
ATXN3-230ENST00000554673 PLEKHF1Q96S99 279 aa7.9□□□□□ -1.14
ATXN3-230ENST00000554673 TMUB1Q9BVT8 246 aa7.9□□□□□ -1.14
ATXN3-230ENST00000554673 LRRC37A3O60309 1634 aa7.89□□□□□ -1.15
ATXN3-230ENST00000554673 USP19O94966 1318 aa7.89□□□□□ -1.15
ATXN3-230ENST00000554673 MAP3K19Q56UN5 1328 aa7.89□□□□□ -1.15
ATXN3-230ENST00000554673 HNRNPUQ00839 825 aaKnown RBP eCLIP7.89□□□□□ -1.15
ATXN3-230ENST00000554673 NUTM2GQ5VZR2 741 aa7.89□□□□□ -1.15
ATXN3-230ENST00000554673 PADI6Q6TGC4 694 aa7.89□□□□□ -1.15
ATXN3-230ENST00000554673 TRIM67Q6ZTA4 783 aa7.89□□□□□ -1.15
ATXN3-230ENST00000554673 MORC1Q86VD1 984 aa7.89□□□□□ -1.15
ATXN3-230ENST00000554673 CCDC146Q8IYE0 955 aa7.89□□□□□ -1.15
ATXN3-230ENST00000554673 TERF2IPQ9NYB0 399 aa7.89□□□□□ -1.15
ATXN3-230ENST00000554673 NCAPD2Q15021 1401 aa7.88□□□□□ -1.15
ATXN3-230ENST00000554673 ZBED9Q6R2W3 1325 aa7.88□□□□□ -1.15
ATXN3-230ENST00000554673 POTECB2RU33 542 aa7.88□□□□□ -1.15
ATXN3-230ENST00000554673 RNF223E7ERA6 249 aa7.88□□□□□ -1.15
ATXN3-230ENST00000554673 IL13P35225 146 aa7.88□□□□□ -1.15
ATXN3-230ENST00000554673 SLC4A3P48751 1232 aa7.88□□□□□ -1.15
ATXN3-230ENST00000554673 MYT1Q01538 1121 aa7.88□□□□□ -1.15
ATXN3-230ENST00000554673 BRINP3Q76B58 766 aa7.88□□□□□ -1.15
ATXN3-230ENST00000554673 PCDHB3Q9Y5E6 796 aa7.88□□□□□ -1.15
ATXN3-230ENST00000554673 AHDC1Q5TGY3 1603 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-230ENST00000554673 SIPA1L3O60292 1781 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-230ENST00000554673 ADAMTS7Q9UKP4 1686 aa7.87□□□□□ -1.15
ATXN3-230ENST00000554673 FOXO3O43524 673 aa7.87□□□□□ -1.15
ATXN3-230ENST00000554673 AMHR2Q16671 573 aa7.87□□□□□ -1.15
ATXN3-230ENST00000554673 HDGFL2Q7Z4V5 671 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-230ENST00000554673 AEBP1Q8IUX7 1158 aa7.87□□□□□ -1.15
ATXN3-230ENST00000554673 CCDC82Q8N4S0 544 aa7.87□□□□□ -1.15
ATXN3-230ENST00000554673 C19orf44Q9H6X5 657 aa7.87□□□□□ -1.15
ATXN3-230ENST00000554673 GOPCQ9HD26 462 aa7.87□□□□□ -1.15
ATXN3-230ENST00000554673 COL22A1Q8NFW1 1626 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-230ENST00000554673 FAM187AA6NFU0 413 aa7.86□□□□□ -1.15
ATXN3-230ENST00000554673 PPEF1O14829 653 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-230ENST00000554673 TLL1O43897 1013 aa7.86□□□□□ -1.15
ATXN3-230ENST00000554673 TRAK2O60296 914 aa7.86□□□□□ -1.15
ATXN3-230ENST00000554673 OSBPP22059 807 aa7.86□□□□□ -1.15
ATXN3-230ENST00000554673 HSP90AB2PQ58FF8 381 aa7.86□□□□□ -1.15
ATXN3-230ENST00000554673 BLOC1S3Q6QNY0 202 aa7.86□□□□□ -1.15
ATXN3-230ENST00000554673 PHACTR3Q96KR7 559 aa7.86□□□□□ -1.15
ATXN3-230ENST00000554673 WNK3Q9BYP7 1800 aa7.86□□□□□ -1.15
ATXN3-230ENST00000554673 NRAPQ86VF7 1730 aa7.86□□□□□ -1.15
ATXN3-230ENST00000554673 GLI3P10071 1580 aa7.85□□□□□ -1.15
ATXN3-230ENST00000554673 TTC21AQ8NDW8 1320 aa7.85□□□□□ -1.15
ATXN3-230ENST00000554673 EIF4A2Q14240 407 aaKnown RBP7.85□□□□□ -1.15
ATXN3-230ENST00000554673 ESCO1Q5FWF5 840 aa7.85□□□□□ -1.15
ATXN3-230ENST00000554673 TRMT2AQ8IZ69 625 aaKnown RBP7.85□□□□□ -1.15
ATXN3-230ENST00000554673 EMID1Q96A84 441 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms