RNA–Protein interactions for RNA: ENST00000554359.1

ITGA7-209, Transcript of integrin subunit alpha 7, humanhuman

TSL 4

Gene ITGA7, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-209ENST00000554359 CEMIPQ8WUJ3 1361 aa24.37■■□□□ 1.49
ITGA7-209ENST00000554359 POLRMTO00411 1230 aaKnown RBP24.36■■□□□ 1.49
ITGA7-209ENST00000554359 ZNF496Q96IT1 587 aaPredicted RBP24.36■■□□□ 1.49
ITGA7-209ENST00000554359 TEFQ10587 303 aa24.35■■□□□ 1.49
ITGA7-209ENST00000554359 BCL2L12Q9HB09 334 aa24.35■■□□□ 1.49
ITGA7-209ENST00000554359 BCS1LQ9Y276 419 aa24.35■■□□□ 1.49
ITGA7-209ENST00000554359 ZPR1O75312 459 aa24.34■■□□□ 1.49
ITGA7-209ENST00000554359 ZNF790Q6PG37 636 aa24.34■■□□□ 1.49
ITGA7-209ENST00000554359 TTC5Q8N0Z6 440 aa24.34■■□□□ 1.49
ITGA7-209ENST00000554359 HEG1Q9ULI3 1381 aa24.33■■□□□ 1.49
ITGA7-209ENST00000554359 NARFQ9UHQ1 456 aa24.33■■□□□ 1.49
ITGA7-209ENST00000554359 U2AF1L5P0DN76 240 aaPredicted RBP24.32■■□□□ 1.48
ITGA7-209ENST00000554359 CANXP27824 592 aaKnown RBP24.32■■□□□ 1.48
ITGA7-209ENST00000554359 U2AF1Q01081 240 aaKnown RBP eCLIP24.32■■□□□ 1.48
ITGA7-209ENST00000554359 KCNQ3O43525 872 aa24.31■■□□□ 1.48
ITGA7-209ENST00000554359 NFIXQ14938 502 aa24.31■■□□□ 1.48
ITGA7-209ENST00000554359 ZNF526Q8TF50 670 aaPredicted RBP24.31■■□□□ 1.48
ITGA7-209ENST00000554359 NUDCQ9Y266 331 aa24.31■■□□□ 1.48
ITGA7-209ENST00000554359 FCHSD2O94868 740 aa24.3■■□□□ 1.48
ITGA7-209ENST00000554359 EIF5P55010 431 aaKnown RBP24.3■■□□□ 1.48
ITGA7-209ENST00000554359 AFDNP55196 1824 aaKnown RBP24.3■■□□□ 1.48
ITGA7-209ENST00000554359 CEP350Q5VT06 3117 aa24.3■■□□□ 1.48
ITGA7-209ENST00000554359 NRXN2Q9P2S2 1712 aa24.3■■□□□ 1.48
ITGA7-209ENST00000554359 SENP3-EIF4A1A0A087X0R7 540 aa24.29■■□□□ 1.48
ITGA7-209ENST00000554359 STARD3NLO95772 234 aa24.29■■□□□ 1.48
ITGA7-209ENST00000554359 CHRNA5P30532 468 aa24.29■■□□□ 1.48
ITGA7-209ENST00000554359 GPBP1L1Q9HC44 474 aaPredicted RBP24.28■■□□□ 1.48
ITGA7-209ENST00000554359 ARFGEF1Q9Y6D6 1849 aa24.28■■□□□ 1.48
ITGA7-209ENST00000554359 ARHGAP27Q6ZUM4 889 aa24.26■■□□□ 1.47
ITGA7-209ENST00000554359 MCM10Q7L590 875 aa24.26■■□□□ 1.47
ITGA7-209ENST00000554359 FMNL2Q96PY5 1086 aa24.26■■□□□ 1.47
ITGA7-209ENST00000554359 PIM2Q9P1W9 311 aa24.26■■□□□ 1.47
ITGA7-209ENST00000554359 SCN7AQ01118 1682 aa24.25■■□□□ 1.47
ITGA7-209ENST00000554359 BTBD11A6QL63 1104 aa24.25■■□□□ 1.47
ITGA7-209ENST00000554359 A1BGP04217 495 aa24.24■■□□□ 1.47
ITGA7-209ENST00000554359 DCTN1Q14203 1278 aa24.24■■□□□ 1.47
ITGA7-209ENST00000554359 CARMIL3Q8ND23 1372 aa24.24■■□□□ 1.47
ITGA7-209ENST00000554359 SERPINB2P05120 415 aa24.23■■□□□ 1.47
ITGA7-209ENST00000554359 DALRD3Q5D0E6 543 aaKnown RBP24.23■■□□□ 1.47
ITGA7-209ENST00000554359 TEX13AQ9BXU3 409 aaPredicted RBP24.23■■□□□ 1.47
ITGA7-209ENST00000554359 PRAMEF22A3QJZ6 481 aa24.22■■□□□ 1.47
ITGA7-209ENST00000554359 A0A087WZG4 1122 aa24.21■■□□□ 1.47
ITGA7-209ENST00000554359 TBC1D9BQ66K14 1250 aa24.21■■□□□ 1.47
ITGA7-209ENST00000554359 TBC1D2BQ9UPU7 963 aa24.21■■□□□ 1.47
ITGA7-209ENST00000554359 IL6STP40189 918 aaPredicted RBP24.2■■□□□ 1.46
ITGA7-209ENST00000554359 BICDL1Q6ZP65 573 aa24.2■■□□□ 1.46
ITGA7-209ENST00000554359 RTF1Q92541 710 aaKnown RBP24.2■■□□□ 1.46
ITGA7-209ENST00000554359 ZNF330Q9Y3S2 320 aaPredicted RBP24.2■■□□□ 1.46
ITGA7-209ENST00000554359 USP16Q9Y5T5 823 aa24.2■■□□□ 1.46
ITGA7-209ENST00000554359 KIF3CO14782 793 aa24.19■■□□□ 1.46
ITGA7-209ENST00000554359 PIP4K2AP48426 406 aaPredicted RBP24.19■■□□□ 1.46
ITGA7-209ENST00000554359 DLEC1Q9Y238 1755 aa24.19■■□□□ 1.46
ITGA7-209ENST00000554359 HTATSF1O43719 755 aaKnown RBP24.17■■□□□ 1.46
ITGA7-209ENST00000554359 CAMTA2O94983 1202 aa24.17■■□□□ 1.46
ITGA7-209ENST00000554359 C9orf131Q5VYM1 1079 aa24.17■■□□□ 1.46
ITGA7-209ENST00000554359 ANKRD31Q8N7Z5 1873 aa24.16■■□□□ 1.46
ITGA7-209ENST00000554359 PLEKHF1Q96S99 279 aa24.16■■□□□ 1.46
ITGA7-209ENST00000554359 BCORQ6W2J9 1755 aa24.16■■□□□ 1.46
ITGA7-209ENST00000554359 DLG5Q8TDM6 1919 aa24.15■■□□□ 1.46
ITGA7-209ENST00000554359 MIS18AQ9NYP9 233 aa24.14■■□□□ 1.45
ITGA7-209ENST00000554359 SNRPA1P09661 255 aaKnown RBP24.13■■□□□ 1.45
ITGA7-209ENST00000554359 PRR5LQ6MZQ0 368 aa24.13■■□□□ 1.45
ITGA7-209ENST00000554359 C2CD5Q86YS7 1000 aa24.13■■□□□ 1.45
ITGA7-209ENST00000554359 CCDC24Q8N4L8 307 aa24.13■■□□□ 1.45
ITGA7-209ENST00000554359 COL11A2P13942 1736 aaPredicted RBP24.13■■□□□ 1.45
ITGA7-209ENST00000554359 NBPF26B4DH59 902 aa24.12■■□□□ 1.45
ITGA7-209ENST00000554359 NBPF10Q6P3W6 841 aaKnown RBP24.12■■□□□ 1.45
ITGA7-209ENST00000554359 DZIP3Q86Y13 1208 aaKnown RBP24.12■■□□□ 1.45
ITGA7-209ENST00000554359 NBPF15Q8N660 670 aa24.12■■□□□ 1.45
ITGA7-209ENST00000554359 SBF1O95248 1867 aa24.12■■□□□ 1.45
ITGA7-209ENST00000554359 PRELPP51888 382 aa24.11■■□□□ 1.45
ITGA7-209ENST00000554359 RASSF7Q02833 373 aa24.11■■□□□ 1.45
ITGA7-209ENST00000554359 TAF7Q15545 349 aaPredicted RBP24.11■■□□□ 1.45
ITGA7-209ENST00000554359 NMRK2Q9NPI5 230 aa24.11■■□□□ 1.45
ITGA7-209ENST00000554359 RNF181Q9P0P0 153 aa24.11■■□□□ 1.45
ITGA7-209ENST00000554359 KDM3BQ7LBC6 1761 aa24.1■■□□□ 1.45
ITGA7-209ENST00000554359 TTLL6Q8N841 843 aa24.09■■□□□ 1.45
ITGA7-209ENST00000554359 THUMPD2Q9BTF0 503 aaKnown RBP24.09■■□□□ 1.45
ITGA7-209ENST00000554359 H0YIN7 160 aa24.08■■□□□ 1.45
ITGA7-209ENST00000554359 NFE2L2Q16236 605 aa24.08■■□□□ 1.45
ITGA7-209ENST00000554359 BRIP1Q9BX63 1249 aa24.08■■□□□ 1.45
ITGA7-209ENST00000554359 LAMB4A4D0S4 1761 aa24.07■■□□□ 1.44
ITGA7-209ENST00000554359 NPM2Q86SE8 214 aaKnown RBP24.07■■□□□ 1.44
ITGA7-209ENST00000554359 SETDB2Q96T68 719 aa24.07■■□□□ 1.44
ITGA7-209ENST00000554359 HSPA6P17066 643 aa24.06■■□□□ 1.44
ITGA7-209ENST00000554359 CNBD1Q8NA66 436 aa24.05■■□□□ 1.44
ITGA7-209ENST00000554359 NFKBIEO00221 500 aa24.04■■□□□ 1.44
ITGA7-209ENST00000554359 NEFMP07197 916 aa24.04■■□□□ 1.44
ITGA7-209ENST00000554359 PDE6BP35913 854 aa24.04■■□□□ 1.44
ITGA7-209ENST00000554359 DDX10Q13206 875 aaKnown RBP24.03■■□□□ 1.44
ITGA7-209ENST00000554359 RALBP1Q15311 655 aa24.03■■□□□ 1.44
ITGA7-209ENST00000554359 CLEC4GQ6UXB4 293 aa24.03■■□□□ 1.44
ITGA7-209ENST00000554359 ZNF622Q969S3 477 aaKnown RBP eCLIP24.03■■□□□ 1.44
ITGA7-209ENST00000554359 EIF4A1P60842 406 aaKnown RBP24.02■■□□□ 1.44
ITGA7-209ENST00000554359 MAPK8IP3Q9UPT6 1336 aa24.02■■□□□ 1.44
ITGA7-209ENST00000554359 TOMM70O94826 608 aa24.01■■□□□ 1.43
ITGA7-209ENST00000554359 LMNB1P20700 586 aa24.01■■□□□ 1.43
ITGA7-209ENST00000554359 PNISRQ8TF01 805 aaKnown RBP24.01■■□□□ 1.43
ITGA7-209ENST00000554359 HLFQ16534 295 aa24■■□□□ 1.43
ITGA7-209ENST00000554359 PDZRN3Q9UPQ7 1066 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms