RNA–Protein interactions for RNA: ENST00000554340.1

NEMP1-204, Transcript of nuclear envelope integral membrane protein 1, humanhuman

TSL 1 (best)

Gene NEMP1, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMP1-204ENST00000554340 USPL1Q5W0Q7 1092 aa27.56■■■□□ 2
NEMP1-204ENST00000554340 ARHGAP27Q6ZUM4 889 aa27.55■■■□□ 2
NEMP1-204ENST00000554340 ZBTB1Q9Y2K1 713 aa27.55■■■□□ 2
NEMP1-204ENST00000554340 NRXN2Q9P2S2 1712 aa27.55■■■□□ 2
NEMP1-204ENST00000554340 GAS2L2Q8NHY3 880 aa27.54■■■□□ 2
NEMP1-204ENST00000554340 PIM2Q9P1W9 311 aa27.54■■■□□ 2
NEMP1-204ENST00000554340 NARFQ9UHQ1 456 aa27.54■■■□□ 2
NEMP1-204ENST00000554340 TTC5Q8N0Z6 440 aa27.53■■■□□ 2
NEMP1-204ENST00000554340 GNAT3A8MTJ3 354 aa27.52■■■□□ 2
NEMP1-204ENST00000554340 TEFQ10587 303 aa27.5■■□□□ 1.99
NEMP1-204ENST00000554340 DALRD3Q5D0E6 543 aaKnown RBP27.5■■□□□ 1.99
NEMP1-204ENST00000554340 IL17REQ8NFR9 667 aa27.5■■□□□ 1.99
NEMP1-204ENST00000554340 DLEC1Q9Y238 1755 aa27.5■■□□□ 1.99
NEMP1-204ENST00000554340 KIF3CO14782 793 aa27.49■■□□□ 1.99
NEMP1-204ENST00000554340 STARD3NLO95772 234 aa27.48■■□□□ 1.99
NEMP1-204ENST00000554340 CHRNA5P30532 468 aa27.48■■□□□ 1.99
NEMP1-204ENST00000554340 NFIXQ14938 502 aa27.48■■□□□ 1.99
NEMP1-204ENST00000554340 CFAP53Q96M91 514 aa27.48■■□□□ 1.99
NEMP1-204ENST00000554340 ZNF790Q6PG37 636 aa27.48■■□□□ 1.99
NEMP1-204ENST00000554340 BCL2L12Q9HB09 334 aa27.48■■□□□ 1.99
NEMP1-204ENST00000554340 SBF1O95248 1867 aa27.47■■□□□ 1.99
NEMP1-204ENST00000554340 CANXP27824 592 aaKnown RBP27.47■■□□□ 1.99
NEMP1-204ENST00000554340 ZNF496Q96IT1 587 aaPredicted RBP27.47■■□□□ 1.99
NEMP1-204ENST00000554340 SCN7AQ01118 1682 aa27.46■■□□□ 1.99
NEMP1-204ENST00000554340 HEG1Q9ULI3 1381 aa27.46■■□□□ 1.99
NEMP1-204ENST00000554340 HSPA6P17066 643 aa27.46■■□□□ 1.99
NEMP1-204ENST00000554340 CEMIPQ8WUJ3 1361 aa27.45■■□□□ 1.99
NEMP1-204ENST00000554340 EIF5P55010 431 aaKnown RBP27.45■■□□□ 1.98
NEMP1-204ENST00000554340 RSPH6AQ9H0K4 717 aa27.45■■□□□ 1.98
NEMP1-204ENST00000554340 PRKAR2BP31323 418 aa27.44■■□□□ 1.98
NEMP1-204ENST00000554340 PHACTR3Q96KR7 559 aa27.44■■□□□ 1.98
NEMP1-204ENST00000554340 TEX13AQ9BXU3 409 aaPredicted RBP27.44■■□□□ 1.98
NEMP1-204ENST00000554340 A0A087WZG4 1122 aa27.43■■□□□ 1.98
NEMP1-204ENST00000554340 C9orf131Q5VYM1 1079 aa27.43■■□□□ 1.98
NEMP1-204ENST00000554340 SERPINB2P05120 415 aa27.42■■□□□ 1.98
NEMP1-204ENST00000554340 FMNL2Q96PY5 1086 aa27.41■■□□□ 1.98
NEMP1-204ENST00000554340 NUDCQ9Y266 331 aa27.41■■□□□ 1.98
NEMP1-204ENST00000554340 PPP2R1AP30153 589 aa27.39■■□□□ 1.98
NEMP1-204ENST00000554340 ANKRD31Q8N7Z5 1873 aa27.39■■□□□ 1.98
NEMP1-204ENST00000554340 IL6STP40189 918 aaPredicted RBP27.37■■□□□ 1.97
NEMP1-204ENST00000554340 NMRK2Q9NPI5 230 aa27.37■■□□□ 1.97
NEMP1-204ENST00000554340 RNF181Q9P0P0 153 aa27.37■■□□□ 1.97
NEMP1-204ENST00000554340 BCORQ6W2J9 1755 aa27.37■■□□□ 1.97
NEMP1-204ENST00000554340 CARMIL3Q8ND23 1372 aa27.37■■□□□ 1.97
NEMP1-204ENST00000554340 BTBD11A6QL63 1104 aa27.36■■□□□ 1.97
NEMP1-204ENST00000554340 TOMM70O94826 608 aa27.36■■□□□ 1.97
NEMP1-204ENST00000554340 U2AF1L5P0DN76 240 aaPredicted RBP27.36■■□□□ 1.97
NEMP1-204ENST00000554340 U2AF1Q01081 240 aaKnown RBP eCLIP27.36■■□□□ 1.97
NEMP1-204ENST00000554340 BICDL1Q6ZP65 573 aa27.35■■□□□ 1.97
NEMP1-204ENST00000554340 ZNF330Q9Y3S2 320 aaPredicted RBP27.35■■□□□ 1.97
NEMP1-204ENST00000554340 TNRC6CQ9HCJ0 1690 aaKnown RBP27.34■■□□□ 1.97
NEMP1-204ENST00000554340 KCNQ3O43525 872 aa27.34■■□□□ 1.97
NEMP1-204ENST00000554340 TBC1D9BQ66K14 1250 aa27.34■■□□□ 1.97
NEMP1-204ENST00000554340 C2CD5Q86YS7 1000 aa27.34■■□□□ 1.97
NEMP1-204ENST00000554340 TBC1D2BQ9UPU7 963 aa27.34■■□□□ 1.97
NEMP1-204ENST00000554340 CCDC88AQ3V6T2 1871 aa27.33■■□□□ 1.97
NEMP1-204ENST00000554340 A1BGP04217 495 aa27.33■■□□□ 1.97
NEMP1-204ENST00000554340 TTLL6Q8N841 843 aa27.33■■□□□ 1.97
NEMP1-204ENST00000554340 COL11A2P13942 1736 aaPredicted RBP27.33■■□□□ 1.96
NEMP1-204ENST00000554340 KDM2BQ8NHM5 1336 aa27.32■■□□□ 1.96
NEMP1-204ENST00000554340 H0YIN7 160 aa27.32■■□□□ 1.96
NEMP1-204ENST00000554340 RTF1Q92541 710 aaKnown RBP27.32■■□□□ 1.96
NEMP1-204ENST00000554340 RASSF7Q02833 373 aa27.3■■□□□ 1.96
NEMP1-204ENST00000554340 NPM2Q86SE8 214 aaKnown RBP27.3■■□□□ 1.96
NEMP1-204ENST00000554340 TIAM2Q8IVF5 1701 aa27.29■■□□□ 1.96
NEMP1-204ENST00000554340 MCM10Q7L590 875 aa27.29■■□□□ 1.96
NEMP1-204ENST00000554340 ZC3H4Q9UPT8 1303 aaKnown RBP27.29■■□□□ 1.96
NEMP1-204ENST00000554340 DLG5Q8TDM6 1919 aa27.28■■□□□ 1.96
NEMP1-204ENST00000554340 APLP1P51693 650 aa27.28■■□□□ 1.96
NEMP1-204ENST00000554340 BRIP1Q9BX63 1249 aa27.28■■□□□ 1.96
NEMP1-204ENST00000554340 PDZRN3Q9UPQ7 1066 aa27.28■■□□□ 1.96
NEMP1-204ENST00000554340 HTATSF1O43719 755 aaKnown RBP27.27■■□□□ 1.96
NEMP1-204ENST00000554340 CAMTA2O94983 1202 aa27.27■■□□□ 1.96
NEMP1-204ENST00000554340 PRR5LQ6MZQ0 368 aa27.27■■□□□ 1.96
NEMP1-204ENST00000554340 RBM46Q8TBY0 533 aaKnown RBP27.27■■□□□ 1.96
NEMP1-204ENST00000554340 USP16Q9Y5T5 823 aa27.27■■□□□ 1.96
NEMP1-204ENST00000554340 LMNB1P20700 586 aa27.26■■□□□ 1.95
NEMP1-204ENST00000554340 PDE6BP35913 854 aa27.26■■□□□ 1.95
NEMP1-204ENST00000554340 C16orf71Q8IYS4 520 aaPredicted RBP27.26■■□□□ 1.95
NEMP1-204ENST00000554340 DZIP3Q86Y13 1208 aaKnown RBP27.25■■□□□ 1.95
NEMP1-204ENST00000554340 SETDB2Q96T68 719 aa27.25■■□□□ 1.95
NEMP1-204ENST00000554340 CACNA1SQ13698 1873 aa27.25■■□□□ 1.95
NEMP1-204ENST00000554340 FER1L6Q2WGJ9 1857 aa27.25■■□□□ 1.95
NEMP1-204ENST00000554340 LAMB4A4D0S4 1761 aa27.25■■□□□ 1.95
NEMP1-204ENST00000554340 WDR90Q96KV7 1748 aa27.24■■□□□ 1.95
NEMP1-204ENST00000554340 SNRPA1P09661 255 aaKnown RBP27.24■■□□□ 1.95
NEMP1-204ENST00000554340 ARFGEF2Q9Y6D5 1785 aa27.24■■□□□ 1.95
NEMP1-204ENST00000554340 PRAMEF22A3QJZ6 481 aa27.23■■□□□ 1.95
NEMP1-204ENST00000554340 PRELPP51888 382 aa27.23■■□□□ 1.95
NEMP1-204ENST00000554340 DCTN1Q14203 1278 aa27.23■■□□□ 1.95
NEMP1-204ENST00000554340 DICER1Q9UPY3 1922 aaKnown RBP27.23■■□□□ 1.95
NEMP1-204ENST00000554340 CNBD1Q8NA66 436 aa27.22■■□□□ 1.95
NEMP1-204ENST00000554340 NFKBIEO00221 500 aa27.22■■□□□ 1.95
NEMP1-204ENST00000554340 PIP4K2AP48426 406 aaPredicted RBP27.22■■□□□ 1.95
NEMP1-204ENST00000554340 CCDC24Q8N4L8 307 aa27.22■■□□□ 1.95
NEMP1-204ENST00000554340 ZNF622Q969S3 477 aaKnown RBP eCLIP27.22■■□□□ 1.953e-9■□□□□ 8.1
NEMP1-204ENST00000554340 RRAGCQ9HB90 399 aa27.22■■□□□ 1.95
NEMP1-204ENST00000554340 KDM3BQ7LBC6 1761 aa27.21■■□□□ 1.95
NEMP1-204ENST00000554340 NEFMP07197 916 aa27.2■■□□□ 1.94
NEMP1-204ENST00000554340 FSTL1Q12841 308 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms