RNA–Protein interactions for RNA: ENST00000554327.5

ITGA7-208, Transcript of integrin subunit alpha 7, humanhuman

TSL 2

Gene ITGA7, Length 1,965 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-208ENST00000554327 PTPRCP08575 1304 aa20.74■□□□□ 0.91
ITGA7-208ENST00000554327 HOXB7P09629 217 aa20.74■□□□□ 0.91
ITGA7-208ENST00000554327 CCDC30Q5VVM6 783 aa20.74■□□□□ 0.91
ITGA7-208ENST00000554327 G2E3Q7L622 706 aa20.74■□□□□ 0.91
ITGA7-208ENST00000554327 TMOD3Q9NYL9 352 aa20.74■□□□□ 0.91
ITGA7-208ENST00000554327 A0A0G2JS52 829 aa20.74■□□□□ 0.91
ITGA7-208ENST00000554327 PIGBQ92521 554 aa20.74■□□□□ 0.91
ITGA7-208ENST00000554327 RGS12O14924 1447 aa20.73■□□□□ 0.91
ITGA7-208ENST00000554327 TRPC5Q9UL62 973 aaPredicted RBP20.73■□□□□ 0.91
ITGA7-208ENST00000554327 PDZRN3Q9UPQ7 1066 aa20.73■□□□□ 0.91
ITGA7-208ENST00000554327 STK31Q9BXU1 1019 aa20.72■□□□□ 0.91
ITGA7-208ENST00000554327 BCL9O00512 1426 aa20.72■□□□□ 0.91
ITGA7-208ENST00000554327 INTS3Q68E01 1043 aaKnown RBP20.71■□□□□ 0.91
ITGA7-208ENST00000554327 SYTL4Q96C24 671 aaPredicted RBP20.71■□□□□ 0.91
ITGA7-208ENST00000554327 CHPF2Q9P2E5 772 aa20.71■□□□□ 0.91
ITGA7-208ENST00000554327 FAM161AQ3B820 660 aa20.7■□□□□ 0.9
ITGA7-208ENST00000554327 FMNL2Q96PY5 1086 aa20.7■□□□□ 0.9
ITGA7-208ENST00000554327 QTRT2Q9H974 415 aaKnown RBP20.7■□□□□ 0.9
ITGA7-208ENST00000554327 ANXA1P04083 346 aa20.7■□□□□ 0.9
ITGA7-208ENST00000554327 PRIM1P49642 420 aaKnown RBP20.7■□□□□ 0.9
ITGA7-208ENST00000554327 ACSBG1Q96GR2 724 aa20.7■□□□□ 0.9
ITGA7-208ENST00000554327 ASAP1Q9ULH1 1129 aa20.7■□□□□ 0.9
ITGA7-208ENST00000554327 BRWD3Q6RI45 1802 aa20.69■□□□□ 0.9
ITGA7-208ENST00000554327 PTCD1O75127 700 aaKnown RBP20.68■□□□□ 0.9
ITGA7-208ENST00000554327 PHAXQ9H814 394 aaKnown RBP20.68■□□□□ 0.9
ITGA7-208ENST00000554327 SMC5Q8IY18 1101 aa20.68■□□□□ 0.9
ITGA7-208ENST00000554327 USP16Q9Y5T5 823 aa20.68■□□□□ 0.9
ITGA7-208ENST00000554327 SNRPA1P09661 255 aaKnown RBP20.67■□□□□ 0.9
ITGA7-208ENST00000554327 FLIIQ13045 1269 aa20.67■□□□□ 0.9
ITGA7-208ENST00000554327 PROSER3Q2NL68 480 aa20.67■□□□□ 0.9
ITGA7-208ENST00000554327 C8orf34Q49A92 452 aa20.67■□□□□ 0.9
ITGA7-208ENST00000554327 ATG3Q9NT62 314 aa20.67■□□□□ 0.9
ITGA7-208ENST00000554327 SBF2Q86WG5 1849 aa20.67■□□□□ 0.9
ITGA7-208ENST00000554327 ANP32AP39687 249 aaKnown RBP20.66■□□□□ 0.9
ITGA7-208ENST00000554327 ILDR2Q71H61 639 aa20.66■□□□□ 0.9
ITGA7-208ENST00000554327 C1orf115Q9H7X2 142 aa20.66■□□□□ 0.9
ITGA7-208ENST00000554327 N4BP2Q86UW6 1770 aaPredicted RBP20.66■□□□□ 0.9
ITGA7-208ENST00000554327 FAM182BQ5T319 152 aa20.66■□□□□ 0.9
ITGA7-208ENST00000554327 ONECUT3O60422 494 aaPredicted RBP20.65■□□□□ 0.9
ITGA7-208ENST00000554327 F6X3S4 739 aa20.65■□□□□ 0.9
ITGA7-208ENST00000554327 EP400Q96L91 3159 aa20.64■□□□□ 0.9
ITGA7-208ENST00000554327 KCNQ2O43526 872 aa20.64■□□□□ 0.89
ITGA7-208ENST00000554327 PDIA6Q15084 440 aa20.64■□□□□ 0.89
ITGA7-208ENST00000554327 DBF4Q9UBU7 674 aaPredicted RBP20.64■□□□□ 0.89
ITGA7-208ENST00000554327 PIP4K2AP48426 406 aaPredicted RBP20.63■□□□□ 0.89
ITGA7-208ENST00000554327 TJP1Q07157 1748 aa20.63■□□□□ 0.89
ITGA7-208ENST00000554327 FKBP5Q13451 457 aaPredicted RBP20.63■□□□□ 0.89
ITGA7-208ENST00000554327 SEPT12Q8IYM1 358 aa20.63■□□□□ 0.89
ITGA7-208ENST00000554327 MSH5O43196 834 aa20.63■□□□□ 0.89
ITGA7-208ENST00000554327 BTAF1O14981 1849 aa20.62■□□□□ 0.89
ITGA7-208ENST00000554327 NHSQ6T4R5 1651 aa20.62■□□□□ 0.89
ITGA7-208ENST00000554327 CHMP4AQ9BY43 222 aa20.61■□□□□ 0.89
ITGA7-208ENST00000554327 NPM2Q86SE8 214 aaKnown RBP20.61■□□□□ 0.89
ITGA7-208ENST00000554327 SIRT2Q8IXJ6 389 aa20.61■□□□□ 0.89
ITGA7-208ENST00000554327 RBM42Q9BTD8 480 aaKnown RBP20.61■□□□□ 0.89
ITGA7-208ENST00000554327 MYL6BP14649 208 aa20.6■□□□□ 0.89
ITGA7-208ENST00000554327 CCT4P50991 539 aaKnown RBP20.6■□□□□ 0.89
ITGA7-208ENST00000554327 SLC4A9Q96Q91 983 aa20.6■□□□□ 0.89
ITGA7-208ENST00000554327 DDX21Q9NR30 783 aaKnown RBP eCLIP20.6■□□□□ 0.89
ITGA7-208ENST00000554327 NUCB1Q02818 461 aa20.59■□□□□ 0.89
ITGA7-208ENST00000554327 SLC4A10Q6U841 1118 aa20.59■□□□□ 0.89
ITGA7-208ENST00000554327 PTF1AQ7RTS3 328 aa20.59■□□□□ 0.89
ITGA7-208ENST00000554327 GCC1Q96CN9 775 aa20.59■□□□□ 0.89
ITGA7-208ENST00000554327 ZNF772Q68DY9 489 aaPredicted RBP20.59■□□□□ 0.89
ITGA7-208ENST00000554327 LRP10Q7Z4F1 713 aa20.57■□□□□ 0.88
ITGA7-208ENST00000554327 HYPKQ9NX55 129 aa20.57■□□□□ 0.88
ITGA7-208ENST00000554327 ADCY9O60503 1353 aa20.57■□□□□ 0.88
ITGA7-208ENST00000554327 DNAJC10Q8IXB1 793 aa20.57■□□□□ 0.88
ITGA7-208ENST00000554327 MEIS3Q99687 375 aa20.57■□□□□ 0.88
ITGA7-208ENST00000554327 NBPF26B4DH59 902 aa20.56■□□□□ 0.88
ITGA7-208ENST00000554327 A1BGP04217 495 aa20.56■□□□□ 0.88
ITGA7-208ENST00000554327 AIMP1Q12904 312 aaKnown RBP20.56■□□□□ 0.88
ITGA7-208ENST00000554327 NBPF14Q5TI25 921 aa20.56■□□□□ 0.88
ITGA7-208ENST00000554327 NBPF10Q6P3W6 841 aaKnown RBP20.56■□□□□ 0.88
ITGA7-208ENST00000554327 NBPF15Q8N660 670 aa20.56■□□□□ 0.88
ITGA7-208ENST00000554327 IPO9Q96P70 1041 aaKnown RBP20.56■□□□□ 0.88
ITGA7-208ENST00000554327 ARFGEF2Q9Y6D5 1785 aa20.56■□□□□ 0.88
ITGA7-208ENST00000554327 ATP10DQ9P241 1426 aa20.56■□□□□ 0.88
ITGA7-208ENST00000554327 PI4KAP2A4QPH2 592 aa20.55■□□□□ 0.88
ITGA7-208ENST00000554327 CHD1LQ86WJ1 897 aa20.55■□□□□ 0.88
ITGA7-208ENST00000554327 VSIG10Q8N0Z9 540 aa20.55■□□□□ 0.88
ITGA7-208ENST00000554327 PI4KAP1Q8N8J0 262 aa20.55■□□□□ 0.88
ITGA7-208ENST00000554327 PXDNLA1KZ92 1463 aa20.55■□□□□ 0.88
ITGA7-208ENST00000554327 RPAP2Q8IXW5 612 aaPredicted RBP20.55■□□□□ 0.88
ITGA7-208ENST00000554327 ANKRD44Q8N8A2 993 aa20.55■□□□□ 0.88
ITGA7-208ENST00000554327 CICQ96RK0 1608 aaPredicted RBP20.54■□□□□ 0.88
ITGA7-208ENST00000554327 PALLDQ8WX93 1383 aa20.54■□□□□ 0.88
ITGA7-208ENST00000554327 RBM6P78332 1123 aaKnown RBP20.54■□□□□ 0.88
ITGA7-208ENST00000554327 XAGE3Q8WTP9 111 aa20.54■□□□□ 0.88
ITGA7-208ENST00000554327 LNPKQ9C0E8 428 aa20.54■□□□□ 0.88
ITGA7-208ENST00000554327 RGS17Q9UGC6 210 aaPredicted RBP20.54■□□□□ 0.88
ITGA7-208ENST00000554327 COL5A3P25940 1745 aaPredicted RBP20.53■□□□□ 0.88
ITGA7-208ENST00000554327 NUP188Q5SRE5 1749 aa20.53■□□□□ 0.88
ITGA7-208ENST00000554327 SOCS7O14512 581 aa20.53■□□□□ 0.88
ITGA7-208ENST00000554327 ANKRD45Q5TZF3 282 aa20.53■□□□□ 0.88
ITGA7-208ENST00000554327 CEP85Q6P2H3 762 aa20.53■□□□□ 0.88
ITGA7-208ENST00000554327 COPS6Q7L5N1 327 aa20.53■□□□□ 0.88
ITGA7-208ENST00000554327 MYH14Q7Z406 1995 aaKnown RBP20.53■□□□□ 0.88
ITGA7-208ENST00000554327 AFDNP55196 1824 aaKnown RBP20.52■□□□□ 0.87
ITGA7-208ENST00000554327 DNAAF4Q8WXU2 420 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms