RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 SOS1Q07889 1333 aaPredicted RBP19.07■□□□□ 0.64
NEDD1-206ENST00000554226 LMNB1P20700 586 aa19.07■□□□□ 0.64
NEDD1-206ENST00000554226 C1orf141Q5JVX7 400 aa19.07■□□□□ 0.64
NEDD1-206ENST00000554226 DICER1Q9UPY3 1922 aaKnown RBP19.06■□□□□ 0.64
NEDD1-206ENST00000554226 TNNT2P45379 298 aaPredicted RBP19.05■□□□□ 0.64
NEDD1-206ENST00000554226 TIMELESSQ9UNS1 1208 aa19.05■□□□□ 0.64
NEDD1-206ENST00000554226 UBR2Q8IWV8 1755 aa19.04■□□□□ 0.64
NEDD1-206ENST00000554226 ZPR1O75312 459 aa19.04■□□□□ 0.64
NEDD1-206ENST00000554226 AEBP1Q8IUX7 1158 aa19.04■□□□□ 0.64
NEDD1-206ENST00000554226 NARFQ9UHQ1 456 aa19.04■□□□□ 0.64
NEDD1-206ENST00000554226 NFIXQ14938 502 aa19.03■□□□□ 0.64
NEDD1-206ENST00000554226 USPL1Q5W0Q7 1092 aa19.03■□□□□ 0.64
NEDD1-206ENST00000554226 POTECB2RU33 542 aa19.02■□□□□ 0.64
NEDD1-206ENST00000554226 CYP19A1P11511 503 aaPredicted RBP19.02■□□□□ 0.64
NEDD1-206ENST00000554226 FER1L6Q2WGJ9 1857 aa19.02■□□□□ 0.64
NEDD1-206ENST00000554226 COL15A1P39059 1388 aa19.02■□□□□ 0.64
NEDD1-206ENST00000554226 DNAJC10Q8IXB1 793 aa19.01■□□□□ 0.63
NEDD1-206ENST00000554226 SLC52A2Q9HAB3 445 aa19.01■□□□□ 0.63
NEDD1-206ENST00000554226 ANKRD31Q8N7Z5 1873 aa19.01■□□□□ 0.63
NEDD1-206ENST00000554226 NFKBIEO00221 500 aa19■□□□□ 0.63
NEDD1-206ENST00000554226 AKAP4Q5JQC9 854 aa19■□□□□ 0.63
NEDD1-206ENST00000554226 TTLL6Q8N841 843 aa19■□□□□ 0.63
NEDD1-206ENST00000554226 BCL2L12Q9HB09 334 aa19■□□□□ 0.63
NEDD1-206ENST00000554226 SULT6B1Q6IMI4 303 aa18.99■□□□□ 0.63
NEDD1-206ENST00000554226 VSIG10Q8N0Z9 540 aa18.99■□□□□ 0.63
NEDD1-206ENST00000554226 SERPINB2P05120 415 aa18.98■□□□□ 0.63
NEDD1-206ENST00000554226 IL13P35225 146 aa18.98■□□□□ 0.63
NEDD1-206ENST00000554226 CREBZFQ9NS37 354 aa18.98■□□□□ 0.63
NEDD1-206ENST00000554226 SCN7AQ01118 1682 aa18.98■□□□□ 0.63
NEDD1-206ENST00000554226 CARMIL3Q8ND23 1372 aa18.97■□□□□ 0.63
NEDD1-206ENST00000554226 COL11A2P13942 1736 aaPredicted RBP18.97■□□□□ 0.63
NEDD1-206ENST00000554226 DPY19L2Q6NUT2 758 aa18.96■□□□□ 0.63
NEDD1-206ENST00000554226 PANK3Q9H999 370 aa18.96■□□□□ 0.63
NEDD1-206ENST00000554226 PDZRN3Q9UPQ7 1066 aa18.96■□□□□ 0.63
NEDD1-206ENST00000554226 ZBTB1Q9Y2K1 713 aa18.96■□□□□ 0.63
NEDD1-206ENST00000554226 ARFGEF2Q9Y6D5 1785 aa18.96■□□□□ 0.63
NEDD1-206ENST00000554226 H0YIN7 160 aa18.95■□□□□ 0.62
NEDD1-206ENST00000554226 C2CD5Q86YS7 1000 aa18.95■□□□□ 0.62
NEDD1-206ENST00000554226 LTBP3Q9NS15 1303 aa18.95■□□□□ 0.62
NEDD1-206ENST00000554226 FOXN1O15353 648 aa18.94■□□□□ 0.62
NEDD1-206ENST00000554226 LGR6Q9HBX8 967 aa18.94■□□□□ 0.62
NEDD1-206ENST00000554226 MKRN1Q9UHC7 482 aaKnown RBP18.94■□□□□ 0.62
NEDD1-206ENST00000554226 RNMTO43148 476 aaKnown RBP18.93■□□□□ 0.62
NEDD1-206ENST00000554226 SLC34A2O95436 690 aa18.93■□□□□ 0.62
NEDD1-206ENST00000554226 EIF5P55010 431 aaKnown RBP18.93■□□□□ 0.62
NEDD1-206ENST00000554226 CHADLQ6NUI6 762 aa18.93■□□□□ 0.62
NEDD1-206ENST00000554226 MORC1Q86VD1 984 aa18.93■□□□□ 0.62
NEDD1-206ENST00000554226 PRDM10Q9NQV6 1147 aa18.93■□□□□ 0.62
NEDD1-206ENST00000554226 BRIP1Q9BX63 1249 aa18.92■□□□□ 0.62
NEDD1-206ENST00000554226 CNTNAP1P78357 1384 aa18.92■□□□□ 0.62
NEDD1-206ENST00000554226 SCN4AP35499 1836 aa18.91■□□□□ 0.62
NEDD1-206ENST00000554226 SLC39A6Q13433 755 aa18.91■□□□□ 0.62
NEDD1-206ENST00000554226 SIPA1L3O60292 1781 aaPredicted RBP18.91■□□□□ 0.62
NEDD1-206ENST00000554226 POTEIP0CG38 1075 aa18.9■□□□□ 0.62
NEDD1-206ENST00000554226 POTEJP0CG39 1038 aa18.9■□□□□ 0.62
NEDD1-206ENST00000554226 ERFEQ4G0M1 354 aa18.9■□□□□ 0.62
NEDD1-206ENST00000554226 A0A087WZG4 1122 aa18.89■□□□□ 0.61
NEDD1-206ENST00000554226 PDE6BP35913 854 aa18.89■□□□□ 0.61
NEDD1-206ENST00000554226 POLR3GLQ9BT43 218 aa18.89■□□□□ 0.61
NEDD1-206ENST00000554226 CLSPNQ9HAW4 1339 aa18.89■□□□□ 0.61
NEDD1-206ENST00000554226 PASKQ96RG2 1323 aa18.88■□□□□ 0.61
NEDD1-206ENST00000554226 BCORQ6W2J9 1755 aa18.88■□□□□ 0.61
NEDD1-206ENST00000554226 SLX4Q8IY92 1834 aa18.88■□□□□ 0.61
NEDD1-206ENST00000554226 C21orf2O43822 256 aa18.87■□□□□ 0.61
NEDD1-206ENST00000554226 STARD3NLO95772 234 aa18.87■□□□□ 0.61
NEDD1-206ENST00000554226 CACNA1SQ13698 1873 aa18.86■□□□□ 0.61
NEDD1-206ENST00000554226 CANXP27824 592 aaKnown RBP18.86■□□□□ 0.61
NEDD1-206ENST00000554226 CTCFP49711 727 aaPredicted RBP18.86■□□□□ 0.61
NEDD1-206ENST00000554226 EIF4G2P78344 907 aaKnown RBP eCLIP18.86■□□□□ 0.61
NEDD1-206ENST00000554226 TBC1D9BQ66K14 1250 aa18.86■□□□□ 0.61
NEDD1-206ENST00000554226 PRR5LQ6MZQ0 368 aa18.86■□□□□ 0.61
NEDD1-206ENST00000554226 TAOK3Q9H2K8 898 aa18.86■□□□□ 0.61
NEDD1-206ENST00000554226 DDNO94850 711 aaPredicted RBP18.85■□□□□ 0.61
NEDD1-206ENST00000554226 MTHFSDQ2M296 383 aaKnown RBP18.85■□□□□ 0.61
NEDD1-206ENST00000554226 ZNF622Q969S3 477 aaKnown RBP eCLIP18.85■□□□□ 0.61
NEDD1-206ENST00000554226 L3MBTL3Q96JM7 780 aaPredicted RBP18.85■□□□□ 0.61
NEDD1-206ENST00000554226 ADAMTSL1Q8N6G6 1762 aa18.85■□□□□ 0.61
NEDD1-206ENST00000554226 IL6STP40189 918 aaPredicted RBP18.84■□□□□ 0.61
NEDD1-206ENST00000554226 AMER1Q5JTC6 1135 aaPredicted RBP18.84■□□□□ 0.61
NEDD1-206ENST00000554226 SOGA3Q5TF21 947 aa18.84■□□□□ 0.61
NEDD1-206ENST00000554226 STYK1Q6J9G0 422 aa18.84■□□□□ 0.61
NEDD1-206ENST00000554226 BICDL1Q6ZP65 573 aa18.84■□□□□ 0.61
NEDD1-206ENST00000554226 AIDAQ96BJ3 306 aa18.84■□□□□ 0.61
NEDD1-206ENST00000554226 TEX13AQ9BXU3 409 aaPredicted RBP18.84■□□□□ 0.61
NEDD1-206ENST00000554226 ZNF219Q9P2Y4 722 aaPredicted RBP18.84■□□□□ 0.61
NEDD1-206ENST00000554226 KNSTRNQ9Y448 316 aa18.84■□□□□ 0.61
NEDD1-206ENST00000554226 HEG1Q9ULI3 1381 aa18.83■□□□□ 0.61
NEDD1-206ENST00000554226 VEGFBP49765 207 aa18.83■□□□□ 0.6
NEDD1-206ENST00000554226 LDHDQ86WU2 507 aa18.83■□□□□ 0.6
NEDD1-206ENST00000554226 CNKSR1Q969H4 720 aa18.83■□□□□ 0.6
NEDD1-206ENST00000554226 IQCA1LA6NCM1 817 aa18.82■□□□□ 0.6
NEDD1-206ENST00000554226 SRGNP10124 158 aa18.82■□□□□ 0.6
NEDD1-206ENST00000554226 HSPA5P11021 654 aaKnown RBP18.82■□□□□ 0.6
NEDD1-206ENST00000554226 TTC5Q8N0Z6 440 aa18.82■□□□□ 0.6
NEDD1-206ENST00000554226 WBP1LQ9NX94 342 aa18.82■□□□□ 0.6
NEDD1-206ENST00000554226 TMEM88BA6NKF7 163 aa18.81■□□□□ 0.6
NEDD1-206ENST00000554226 HMOX1P09601 288 aa18.81■□□□□ 0.6
NEDD1-206ENST00000554226 ZNF496Q96IT1 587 aaPredicted RBP18.81■□□□□ 0.6
NEDD1-206ENST00000554226 ITGBL1O95965 494 aaPredicted RBP18.8■□□□□ 0.6
NEDD1-206ENST00000554226 LBX1P52954 281 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms