RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 CLPPQ16740 277 aaPredicted RBP4.71□□□□□ -1.66
LRFN5-204ENST00000554171 SUGP1Q8IWZ8 645 aaKnown RBP4.71□□□□□ -1.66
LRFN5-204ENST00000554171 TTC14Q96N46 770 aa4.71□□□□□ -1.66
LRFN5-204ENST00000554171 NEUROD6Q96NK8 337 aa4.71□□□□□ -1.66
LRFN5-204ENST00000554171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.71□□□□□ -1.66
LRFN5-204ENST00000554171 IQSEC3Q9UPP2 1182 aaPredicted RBP4.71□□□□□ -1.66
LRFN5-204ENST00000554171 U2AF1L5P0DN76 240 aaPredicted RBP4.71□□□□□ -1.66
LRFN5-204ENST00000554171 U2AF1Q01081 240 aaKnown RBP eCLIP4.71□□□□□ -1.66
LRFN5-204ENST00000554171 DCTN1Q14203 1278 aa4.71□□□□□ -1.66
LRFN5-204ENST00000554171 MAPRE1Q15691 268 aaKnown RBP4.71□□□□□ -1.66
LRFN5-204ENST00000554171 SLF2Q8IX21 1173 aa4.71□□□□□ -1.66
LRFN5-204ENST00000554171 LILRB1Q8NHL6 650 aaPredicted RBP4.71□□□□□ -1.66
LRFN5-204ENST00000554171 AVENQ9NQS1 362 aaPredicted RBP4.71□□□□□ -1.66
LRFN5-204ENST00000554171 COG6Q9Y2V7 657 aa4.71□□□□□ -1.66
LRFN5-204ENST00000554171 KIAA1107Q9UPP5 1409 aa4.71□□□□□ -1.66
LRFN5-204ENST00000554171 PDE4BQ07343 736 aa4.71□□□□□ -1.66
LRFN5-204ENST00000554171 MYSM1Q5VVJ2 828 aa4.71□□□□□ -1.66
LRFN5-204ENST00000554171 RPAP2Q8IXW5 612 aaPredicted RBP4.71□□□□□ -1.66
LRFN5-204ENST00000554171 FBXW7Q969H0 707 aa4.71□□□□□ -1.66
LRFN5-204ENST00000554171 TBC1D20Q96BZ9 403 aa4.71□□□□□ -1.66
LRFN5-204ENST00000554171 PRR12Q9ULL5 1215 aa4.71□□□□□ -1.66
LRFN5-204ENST00000554171 EEA1Q15075 1411 aa4.7□□□□□ -1.66
LRFN5-204ENST00000554171 PSMD2Q13200 908 aa4.7□□□□□ -1.66
LRFN5-204ENST00000554171 MFSD4BQ5TF39 518 aa4.7□□□□□ -1.66
LRFN5-204ENST00000554171 CCDC26Q8TAB7 109 aa4.7□□□□□ -1.66
LRFN5-204ENST00000554171 GPT2Q8TD30 523 aa4.7□□□□□ -1.66
LRFN5-204ENST00000554171 RABGGTAQ92696 567 aa4.7□□□□□ -1.66
LRFN5-204ENST00000554171 TMX1Q9H3N1 280 aa4.7□□□□□ -1.66
LRFN5-204ENST00000554171 DDX49Q9Y6V7 483 aaKnown RBP4.7□□□□□ -1.66
LRFN5-204ENST00000554171 THOC2Q8NI27 1593 aaKnown RBP4.7□□□□□ -1.66
LRFN5-204ENST00000554171 SCAPERQ9BY12 1400 aa4.7□□□□□ -1.66
LRFN5-204ENST00000554171 ZBED6P86452 979 aa4.7□□□□□ -1.66
LRFN5-204ENST00000554171 ANKRD45Q5TZF3 282 aa4.7□□□□□ -1.66
LRFN5-204ENST00000554171 RNF39Q9H2S5 420 aa4.7□□□□□ -1.66
LRFN5-204ENST00000554171 SQORQ9Y6N5 450 aa4.7□□□□□ -1.66
LRFN5-204ENST00000554171 B4GALT4O60513 344 aa4.7□□□□□ -1.66
LRFN5-204ENST00000554171 USP11P51784 963 aa4.7□□□□□ -1.66
LRFN5-204ENST00000554171 HSP90AB2PQ58FF8 381 aa4.7□□□□□ -1.66
LRFN5-204ENST00000554171 PDXDC2PQ6P474 469 aa4.7□□□□□ -1.66
LRFN5-204ENST00000554171 CCDC191Q8NCU4 936 aa4.7□□□□□ -1.66
LRFN5-204ENST00000554171 SEMA4AQ9H3S1 761 aa4.7□□□□□ -1.66
LRFN5-204ENST00000554171 NLRP1Q9C000 1473 aa4.7□□□□□ -1.66
LRFN5-204ENST00000554171 LDHCP07864 332 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 PSMA3P25788 255 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 TSR1Q2NL82 804 aaKnown RBP4.69□□□□□ -1.66
LRFN5-204ENST00000554171 MNS1Q8NEH6 495 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 ANKRD7Q92527 254 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 RMI1Q9H9A7 625 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 SENP2Q9HC62 589 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 COMMD8Q9NX08 183 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 PCDHGB3Q9Y5G1 929 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 TRIM37O94972 964 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 ABL2P42684 1182 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 FAM161AQ3B820 660 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 LRCH2Q5VUJ6 765 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 TEKT1Q969V4 418 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 TIMM22Q9Y584 194 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 LILRB3O75022 631 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 BAIAP3O94812 1187 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 MS4A1P11836 297 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 MAN1A1P33908 653 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 TCEAL1Q15170 157 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 ANKRD39Q53RE8 183 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 PODNQ7Z5L7 613 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 ZNF483Q8TF39 744 aaPredicted RBP4.69□□□□□ -1.66
LRFN5-204ENST00000554171 SMARCC1Q92922 1105 aaPredicted RBP4.69□□□□□ -1.66
LRFN5-204ENST00000554171 KCNH8Q96L42 1107 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 PAIP2Q9BPZ3 127 aaKnown RBP4.69□□□□□ -1.66
LRFN5-204ENST00000554171 TMOD4Q9NZQ9 345 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.69□□□□□ -1.66
LRFN5-204ENST00000554171 TPM3P06753 285 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 ZNF16P17020 682 aaPredicted RBP4.69□□□□□ -1.66
LRFN5-204ENST00000554171 INHBCP55103 352 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 GABPB1Q06547 395 aaPredicted RBP4.69□□□□□ -1.66
LRFN5-204ENST00000554171 CCDC93Q567U6 631 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 ARHGAP27Q6ZUM4 889 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 NOP9Q86U38 636 aaKnown RBP4.69□□□□□ -1.66
LRFN5-204ENST00000554171 THOC1Q96FV9 657 aaKnown RBP4.69□□□□□ -1.66
LRFN5-204ENST00000554171 RNPC3Q96LT9 517 aaKnown RBP4.69□□□□□ -1.66
LRFN5-204ENST00000554171 SLC26A8Q96RN1 970 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 PAGR1Q9BTK6 254 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 PIF1Q9H611 641 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 DCAF16Q9NXF7 216 aa4.69□□□□□ -1.66
LRFN5-204ENST00000554171 FAM25EA8MYX2 175 aa4.68□□□□□ -1.66
LRFN5-204ENST00000554171 TSPY4P0CV99 314 aa4.68□□□□□ -1.66
LRFN5-204ENST00000554171 TSPY10P0CW01 314 aa4.68□□□□□ -1.66
LRFN5-204ENST00000554171 CASQ1P31415 396 aa4.68□□□□□ -1.66
LRFN5-204ENST00000554171 SMUG1Q53HV7 270 aa4.68□□□□□ -1.66
LRFN5-204ENST00000554171 CDCA2Q69YH5 1023 aaPredicted RBP4.68□□□□□ -1.66
LRFN5-204ENST00000554171 LMNTD2Q8IXW0 634 aa4.68□□□□□ -1.66
LRFN5-204ENST00000554171 UHMK1Q8TAS1 419 aaKnown RBP4.68□□□□□ -1.66
LRFN5-204ENST00000554171 C17orf50Q8WW18 174 aa4.68□□□□□ -1.66
LRFN5-204ENST00000554171 FAM212AQ96EL1 285 aa4.68□□□□□ -1.66
LRFN5-204ENST00000554171 TBC1D2Q9BYX2 928 aa4.68□□□□□ -1.66
LRFN5-204ENST00000554171 USP2O75604 605 aaPredicted RBP4.68□□□□□ -1.66
LRFN5-204ENST00000554171 ATP2B1P20020 1258 aa4.68□□□□□ -1.66
LRFN5-204ENST00000554171 RPS6KA3P51812 740 aa4.68□□□□□ -1.66
LRFN5-204ENST00000554171 CTR9Q6PD62 1173 aa4.68□□□□□ -1.66
LRFN5-204ENST00000554171 TIGD1Q96MW7 591 aa4.68□□□□□ -1.66
LRFN5-204ENST00000554171 GPCPD1Q9NPB8 672 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms