RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 SLC39A6Q13433 755 aa15.82■□□□□ 0.12
TUBB3-204ENST00000554116 KLRG1Q96E93 195 aa15.82■□□□□ 0.12
TUBB3-204ENST00000554116 SLC52A2Q9HAB3 445 aa15.82■□□□□ 0.12
TUBB3-204ENST00000554116 FSTL1Q12841 308 aa15.81■□□□□ 0.12
TUBB3-204ENST00000554116 DALRD3Q5D0E6 543 aaKnown RBP15.81■□□□□ 0.12
TUBB3-204ENST00000554116 AKAP4Q5JQC9 854 aa15.81■□□□□ 0.12
TUBB3-204ENST00000554116 USPL1Q5W0Q7 1092 aa15.81■□□□□ 0.12
TUBB3-204ENST00000554116 JMYQ8N9B5 988 aa15.81■□□□□ 0.12
TUBB3-204ENST00000554116 UBR2Q8IWV8 1755 aa15.8■□□□□ 0.12
TUBB3-204ENST00000554116 DLEC1Q9Y238 1755 aa15.8■□□□□ 0.12
TUBB3-204ENST00000554116 RNMTO43148 476 aaKnown RBP15.8■□□□□ 0.12
TUBB3-204ENST00000554116 NFIXQ14938 502 aa15.8■□□□□ 0.12
TUBB3-204ENST00000554116 RNF181Q9P0P0 153 aa15.79■□□□□ 0.12
TUBB3-204ENST00000554116 ZBTB1Q9Y2K1 713 aa15.79■□□□□ 0.12
TUBB3-204ENST00000554116 CCDC88AQ3V6T2 1871 aa15.79■□□□□ 0.12
TUBB3-204ENST00000554116 KDM2BQ8NHM5 1336 aa15.78■□□□□ 0.12
TUBB3-204ENST00000554116 PER1O15534 1290 aaPredicted RBP15.78■□□□□ 0.12
TUBB3-204ENST00000554116 HMOX1P09601 288 aa15.78■□□□□ 0.12
TUBB3-204ENST00000554116 MTHFSDQ2M296 383 aaKnown RBP15.78■□□□□ 0.12
TUBB3-204ENST00000554116 COL13A1Q5TAT6 717 aaPredicted RBP15.78■□□□□ 0.12
TUBB3-204ENST00000554116 RRAGCQ9HB90 399 aa15.78■□□□□ 0.12
TUBB3-204ENST00000554116 NARFQ9UHQ1 456 aa15.78■□□□□ 0.12
TUBB3-204ENST00000554116 CARMIL3Q8ND23 1372 aa15.77■□□□□ 0.12
TUBB3-204ENST00000554116 TNRC6CQ9HCJ0 1690 aaKnown RBP15.77■□□□□ 0.12
TUBB3-204ENST00000554116 RASSF7Q02833 373 aa15.77■□□□□ 0.12
TUBB3-204ENST00000554116 ANKRD31Q8N7Z5 1873 aa15.77■□□□□ 0.11
TUBB3-204ENST00000554116 COL15A1P39059 1388 aa15.76■□□□□ 0.11
TUBB3-204ENST00000554116 KNSTRNQ9Y448 316 aa15.76■□□□□ 0.11
TUBB3-204ENST00000554116 ZPR1O75312 459 aa15.75■□□□□ 0.11
TUBB3-204ENST00000554116 TNS4Q8IZW8 715 aa15.75■□□□□ 0.11
TUBB3-204ENST00000554116 SIPA1L3O60292 1781 aaPredicted RBP15.75■□□□□ 0.11
TUBB3-204ENST00000554116 KIF7Q2M1P5 1343 aa15.73■□□□□ 0.11
TUBB3-204ENST00000554116 COL3A1P02461 1466 aaPredicted RBP15.73■□□□□ 0.11
TUBB3-204ENST00000554116 POTECB2RU33 542 aa15.73■□□□□ 0.11
TUBB3-204ENST00000554116 NFKBIEO00221 500 aa15.73■□□□□ 0.11
TUBB3-204ENST00000554116 CAPN15O75808 1086 aa15.73■□□□□ 0.11
TUBB3-204ENST00000554116 SERPINB2P05120 415 aa15.73■□□□□ 0.11
TUBB3-204ENST00000554116 EIF5P55010 431 aaKnown RBP15.73■□□□□ 0.11
TUBB3-204ENST00000554116 VSIG10Q8N0Z9 540 aa15.73■□□□□ 0.11
TUBB3-204ENST00000554116 SMC1BQ8NDV3 1235 aa15.72■□□□□ 0.11
TUBB3-204ENST00000554116 IL17REQ8NFR9 667 aa15.72■□□□□ 0.11
TUBB3-204ENST00000554116 COL11A2P13942 1736 aaPredicted RBP15.71■□□□□ 0.11
TUBB3-204ENST00000554116 TIAM2Q8IVF5 1701 aa15.71■□□□□ 0.11
TUBB3-204ENST00000554116 FER1L6Q2WGJ9 1857 aa15.71■□□□□ 0.11
TUBB3-204ENST00000554116 ZC3H4Q9UPT8 1303 aaKnown RBP15.7■□□□□ 0.1
TUBB3-204ENST00000554116 CANXP27824 592 aaKnown RBP15.7■□□□□ 0.1
TUBB3-204ENST00000554116 ZNF496Q96IT1 587 aaPredicted RBP15.7■□□□□ 0.1
TUBB3-204ENST00000554116 SCN7AQ01118 1682 aa15.7■□□□□ 0.1
TUBB3-204ENST00000554116 DICER1Q9UPY3 1922 aaKnown RBP15.69■□□□□ 0.1
TUBB3-204ENST00000554116 GLTPD2A6NH11 291 aa15.69■□□□□ 0.1
TUBB3-204ENST00000554116 DIAPH1O60610 1272 aaKnown RBP15.69■□□□□ 0.1
TUBB3-204ENST00000554116 LMNB1P20700 586 aa15.69■□□□□ 0.1
TUBB3-204ENST00000554116 TBC1D9BQ66K14 1250 aa15.69■□□□□ 0.1
TUBB3-204ENST00000554116 C2CD5Q86YS7 1000 aa15.69■□□□□ 0.1
TUBB3-204ENST00000554116 TTLL6Q8N841 843 aa15.69■□□□□ 0.1
TUBB3-204ENST00000554116 CCDC24Q8N4L8 307 aa15.68■□□□□ 0.1
TUBB3-204ENST00000554116 CC2D1BQ5T0F9 858 aaKnown RBP15.67■□□□□ 0.1
TUBB3-204ENST00000554116 BICDL1Q6ZP65 573 aa15.67■□□□□ 0.1
TUBB3-204ENST00000554116 SLX4Q8IY92 1834 aa15.66■□□□□ 0.1
TUBB3-204ENST00000554116 HEG1Q9ULI3 1381 aa15.66■□□□□ 0.1
TUBB3-204ENST00000554116 KCNQ3O43525 872 aa15.66■□□□□ 0.1
TUBB3-204ENST00000554116 VEGFAP15692 232 aaPredicted RBP15.66■□□□□ 0.1
TUBB3-204ENST00000554116 PRR5LQ6MZQ0 368 aa15.66■□□□□ 0.1
TUBB3-204ENST00000554116 ZNF790Q6PG37 636 aa15.66■□□□□ 0.1
TUBB3-204ENST00000554116 H0YIN7 160 aa15.65■□□□□ 0.1
TUBB3-204ENST00000554116 A1BGP04217 495 aa15.65■□□□□ 0.1
TUBB3-204ENST00000554116 HSPA1AP0DMV8 641 aaKnown RBP15.65■□□□□ 0.1
TUBB3-204ENST00000554116 HSPA1BP0DMV9 641 aaKnown RBP15.65■□□□□ 0.1
TUBB3-204ENST00000554116 TBC1D2BQ9UPU7 963 aa15.65■□□□□ 0.1
TUBB3-204ENST00000554116 CEMIPQ8WUJ3 1361 aa15.64■□□□□ 0.09
TUBB3-204ENST00000554116 STARD3NLO95772 234 aa15.64■□□□□ 0.09
TUBB3-204ENST00000554116 CACNA1SQ13698 1873 aa15.64■□□□□ 0.09
TUBB3-204ENST00000554116 PHACTR3Q96KR7 559 aa15.64■□□□□ 0.09
TUBB3-204ENST00000554116 BRIP1Q9BX63 1249 aa15.64■□□□□ 0.09
TUBB3-204ENST00000554116 BCORQ6W2J9 1755 aa15.64■□□□□ 0.09
TUBB3-204ENST00000554116 CAMTA2O94983 1202 aa15.63■□□□□ 0.09
TUBB3-204ENST00000554116 NPC1L1Q9UHC9 1359 aa15.62■□□□□ 0.09
TUBB3-204ENST00000554116 ARFGEF2Q9Y6D5 1785 aa15.62■□□□□ 0.09
TUBB3-204ENST00000554116 GNAT3A8MTJ3 354 aa15.62■□□□□ 0.09
TUBB3-204ENST00000554116 C21orf2O43822 256 aa15.62■□□□□ 0.09
TUBB3-204ENST00000554116 IL6STP40189 918 aaPredicted RBP15.62■□□□□ 0.09
TUBB3-204ENST00000554116 ZNF219Q9P2Y4 722 aaPredicted RBP15.62■□□□□ 0.09
TUBB3-204ENST00000554116 A0A087WZG4 1122 aa15.61■□□□□ 0.09
TUBB3-204ENST00000554116 PRAMEF22A3QJZ6 481 aa15.61■□□□□ 0.09
TUBB3-204ENST00000554116 POTEIP0CG38 1075 aa15.61■□□□□ 0.09
TUBB3-204ENST00000554116 POTEJP0CG39 1038 aa15.61■□□□□ 0.09
TUBB3-204ENST00000554116 TTC5Q8N0Z6 440 aa15.61■□□□□ 0.09
TUBB3-204ENST00000554116 ZNF622Q969S3 477 aaKnown RBP eCLIP15.61■□□□□ 0.09
TUBB3-204ENST00000554116 USP16Q9Y5T5 823 aa15.61■□□□□ 0.09
TUBB3-204ENST00000554116 PIP4K2AP48426 406 aaPredicted RBP15.6■□□□□ 0.09
TUBB3-204ENST00000554116 C7orf43Q8WVR3 580 aa15.6■□□□□ 0.09
TUBB3-204ENST00000554116 U2SURPO15042 1029 aaKnown RBP15.59■□□□□ 0.09
TUBB3-204ENST00000554116 SRGNP10124 158 aa15.59■□□□□ 0.09
TUBB3-204ENST00000554116 PDE6BP35913 854 aa15.59■□□□□ 0.09
TUBB3-204ENST00000554116 TEFQ10587 303 aa15.59■□□□□ 0.09
TUBB3-204ENST00000554116 GAS2L2Q8NHY3 880 aa15.59■□□□□ 0.09
TUBB3-204ENST00000554116 TEX13AQ9BXU3 409 aaPredicted RBP15.59■□□□□ 0.09
TUBB3-204ENST00000554116 RSPH6AQ9H0K4 717 aa15.59■□□□□ 0.09
TUBB3-204ENST00000554116 LTBP3Q9NS15 1303 aa15.59■□□□□ 0.09
TUBB3-204ENST00000554116 FMNL2Q96PY5 1086 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms