RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 LGR6Q9HBX8 967 aa13.34□□□□□ -0.27
ACTN1-210ENST00000553779 ZNF330Q9Y3S2 320 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-210ENST00000553779 KCPQ6ZWJ8 1503 aa13.34□□□□□ -0.27
ACTN1-210ENST00000553779 NPHP1O15259 732 aa13.33□□□□□ -0.28
ACTN1-210ENST00000553779 DDR1Q08345 913 aa13.33□□□□□ -0.28
ACTN1-210ENST00000553779 TEFQ10587 303 aa13.33□□□□□ -0.28
ACTN1-210ENST00000553779 C9orf131Q5VYM1 1079 aa13.33□□□□□ -0.28
ACTN1-210ENST00000553779 RNF181Q9P0P0 153 aa13.33□□□□□ -0.28
ACTN1-210ENST00000553779 SOS1Q07889 1333 aaPredicted RBP13.33□□□□□ -0.28
ACTN1-210ENST00000553779 WDR90Q96KV7 1748 aa13.33□□□□□ -0.28
ACTN1-210ENST00000553779 SCN7AQ01118 1682 aa13.32□□□□□ -0.28
ACTN1-210ENST00000553779 CANXP27824 592 aaKnown RBP13.32□□□□□ -0.28
ACTN1-210ENST00000553779 CHRNA5P30532 468 aa13.32□□□□□ -0.28
ACTN1-210ENST00000553779 MTHFSDQ2M296 383 aaKnown RBP13.32□□□□□ -0.28
ACTN1-210ENST00000553779 INTS5Q6P9B9 1019 aaKnown RBP13.32□□□□□ -0.28
ACTN1-210ENST00000553779 KDM2BQ8NHM5 1336 aa13.32□□□□□ -0.28
ACTN1-210ENST00000553779 NRXN2Q9P2S2 1712 aa13.31□□□□□ -0.28
ACTN1-210ENST00000553779 POLRMTO00411 1230 aaKnown RBP13.31□□□□□ -0.28
ACTN1-210ENST00000553779 KIF3CO14782 793 aa13.31□□□□□ -0.28
ACTN1-210ENST00000553779 STARD3NLO95772 234 aa13.31□□□□□ -0.28
ACTN1-210ENST00000553779 GAS2L2Q8NHY3 880 aa13.31□□□□□ -0.28
ACTN1-210ENST00000553779 CFAP53Q96M91 514 aa13.31□□□□□ -0.28
ACTN1-210ENST00000553779 TOMM70O94826 608 aa13.3□□□□□ -0.28
ACTN1-210ENST00000553779 CYP19A1P11511 503 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-210ENST00000553779 APLP1P51693 650 aa13.3□□□□□ -0.28
ACTN1-210ENST00000553779 BICDL1Q6ZP65 573 aa13.3□□□□□ -0.28
ACTN1-210ENST00000553779 NMRK2Q9NPI5 230 aa13.3□□□□□ -0.28
ACTN1-210ENST00000553779 NARFQ9UHQ1 456 aa13.3□□□□□ -0.28
ACTN1-210ENST00000553779 ZBTB1Q9Y2K1 713 aa13.3□□□□□ -0.28
ACTN1-210ENST00000553779 DICER1Q9UPY3 1922 aaKnown RBP13.3□□□□□ -0.28
ACTN1-210ENST00000553779 ANKRD31Q8N7Z5 1873 aa13.29□□□□□ -0.28
ACTN1-210ENST00000553779 A0A087WZG4 1122 aa13.29□□□□□ -0.28
ACTN1-210ENST00000553779 GNAT3A8MTJ3 354 aa13.29□□□□□ -0.28
ACTN1-210ENST00000553779 BCORQ6W2J9 1755 aa13.28□□□□□ -0.28
ACTN1-210ENST00000553779 NFIXQ14938 502 aa13.28□□□□□ -0.28
ACTN1-210ENST00000553779 VSIG10Q8N0Z9 540 aa13.28□□□□□ -0.28
ACTN1-210ENST00000553779 COL3A1P02461 1466 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-210ENST00000553779 COL11A2P13942 1736 aaPredicted RBP13.27□□□□□ -0.28
ACTN1-210ENST00000553779 SERPINB2P05120 415 aa13.27□□□□□ -0.29
ACTN1-210ENST00000553779 KCNA3P22001 575 aa13.27□□□□□ -0.29
ACTN1-210ENST00000553779 C2CD5Q86YS7 1000 aa13.27□□□□□ -0.29
ACTN1-210ENST00000553779 H0YIN7 160 aa13.26□□□□□ -0.29
ACTN1-210ENST00000553779 TM4SF1P30408 202 aa13.26□□□□□ -0.29
ACTN1-210ENST00000553779 RASSF7Q02833 373 aa13.26□□□□□ -0.29
ACTN1-210ENST00000553779 DLG5Q8TDM6 1919 aa13.26□□□□□ -0.29
ACTN1-210ENST00000553779 TEX13AQ9BXU3 409 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-210ENST00000553779 NUDCQ9Y266 331 aa13.26□□□□□ -0.29
ACTN1-210ENST00000553779 NPC1L1Q9UHC9 1359 aa13.25□□□□□ -0.29
ACTN1-210ENST00000553779 HEG1Q9ULI3 1381 aa13.25□□□□□ -0.29
ACTN1-210ENST00000553779 TTLL6Q8N841 843 aa13.25□□□□□ -0.29
ACTN1-210ENST00000553779 RBM46Q8TBY0 533 aaKnown RBP13.25□□□□□ -0.29
ACTN1-210ENST00000553779 FMNL2Q96PY5 1086 aa13.25□□□□□ -0.29
ACTN1-210ENST00000553779 FER1L6Q2WGJ9 1857 aa13.25□□□□□ -0.29
ACTN1-210ENST00000553779 ARFGEF2Q9Y6D5 1785 aa13.25□□□□□ -0.29
ACTN1-210ENST00000553779 CARMIL3Q8ND23 1372 aa13.24□□□□□ -0.29
ACTN1-210ENST00000553779 PRKAR2BP31323 418 aa13.24□□□□□ -0.29
ACTN1-210ENST00000553779 ZNF790Q6PG37 636 aa13.24□□□□□ -0.29
ACTN1-210ENST00000553779 RTF1Q92541 710 aaKnown RBP13.24□□□□□ -0.29
ACTN1-210ENST00000553779 ZNF622Q969S3 477 aaKnown RBP eCLIP13.24□□□□□ -0.29
ACTN1-210ENST00000553779 ZNF496Q96IT1 587 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-210ENST00000553779 ZNF219Q9P2Y4 722 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-210ENST00000553779 LAMB4A4D0S4 1761 aa13.23□□□□□ -0.29
ACTN1-210ENST00000553779 BTBD11A6QL63 1104 aa13.23□□□□□ -0.29
ACTN1-210ENST00000553779 PER1O15534 1290 aaPredicted RBP13.23□□□□□ -0.29
ACTN1-210ENST00000553779 NEFMP07197 916 aa13.23□□□□□ -0.29
ACTN1-210ENST00000553779 LMNB1P20700 586 aa13.23□□□□□ -0.29
ACTN1-210ENST00000553779 IFFO2Q5TF58 517 aa13.23□□□□□ -0.29
ACTN1-210ENST00000553779 RRAGCQ9HB90 399 aa13.23□□□□□ -0.29
ACTN1-210ENST00000553779 TBC1D2BQ9UPU7 963 aa13.23□□□□□ -0.29
ACTN1-210ENST00000553779 ZC3H4Q9UPT8 1303 aaKnown RBP13.22□□□□□ -0.29
ACTN1-210ENST00000553779 U2AF1L5P0DN76 240 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-210ENST00000553779 PDE6BP35913 854 aa13.22□□□□□ -0.29
ACTN1-210ENST00000553779 ST5P78524 1137 aa13.22□□□□□ -0.29
ACTN1-210ENST00000553779 U2AF1Q01081 240 aaKnown RBP eCLIP13.22□□□□□ -0.29
ACTN1-210ENST00000553779 FSTL1Q12841 308 aa13.22□□□□□ -0.29
ACTN1-210ENST00000553779 CNBD1Q8NA66 436 aa13.22□□□□□ -0.29
ACTN1-210ENST00000553779 SLX4Q8IY92 1834 aa13.22□□□□□ -0.29
ACTN1-210ENST00000553779 IL6STP40189 918 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-210ENST00000553779 EIF5P55010 431 aaKnown RBP13.21□□□□□ -0.29
ACTN1-210ENST00000553779 TBC1D9BQ66K14 1250 aa13.21□□□□□ -0.29
ACTN1-210ENST00000553779 SMC1BQ8NDV3 1235 aa13.21□□□□□ -0.29
ACTN1-210ENST00000553779 SETDB2Q96T68 719 aa13.21□□□□□ -0.29
ACTN1-210ENST00000553779 BCL2L12Q9HB09 334 aa13.21□□□□□ -0.29
ACTN1-210ENST00000553779 PDZRN3Q9UPQ7 1066 aa13.21□□□□□ -0.29
ACTN1-210ENST00000553779 IL17REQ8NFR9 667 aa13.2□□□□□ -0.3
ACTN1-210ENST00000553779 ZNF652Q9Y2D9 606 aa13.2□□□□□ -0.3
ACTN1-210ENST00000553779 NUP98P52948 1817 aa13.19□□□□□ -0.3
ACTN1-210ENST00000553779 DZIP3Q86Y13 1208 aaKnown RBP13.19□□□□□ -0.3
ACTN1-210ENST00000553779 CCDC24Q8N4L8 307 aa13.19□□□□□ -0.3
ACTN1-210ENST00000553779 BRIP1Q9BX63 1249 aa13.19□□□□□ -0.3
ACTN1-210ENST00000553779 C21orf2O43822 256 aa13.18□□□□□ -0.3
ACTN1-210ENST00000553779 A1BGP04217 495 aa13.18□□□□□ -0.3
ACTN1-210ENST00000553779 PRR5LQ6MZQ0 368 aa13.18□□□□□ -0.3
ACTN1-210ENST00000553779 DPY19L2Q6NUT2 758 aa13.18□□□□□ -0.3
ACTN1-210ENST00000553779 NBPF5PQ86XG9 351 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-210ENST00000553779 RSPH6AQ9H0K4 717 aa13.18□□□□□ -0.3
ACTN1-210ENST00000553779 CEMIPQ8WUJ3 1361 aa13.18□□□□□ -0.3
ACTN1-210ENST00000553779 VEGFAP15692 232 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-210ENST00000553779 PIP4K2AP48426 406 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-210ENST00000553779 MCM10Q7L590 875 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms