RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 TCHHQ07283 1943 aa8.45□□□□□ -1.06
LINC-ROR-201ENST00000553704 PXDNQ92626 1479 aa8.45□□□□□ -1.06
LINC-ROR-201ENST00000553704 KCNQ3O43525 872 aa8.45□□□□□ -1.06
LINC-ROR-201ENST00000553704 ANXA1P04083 346 aa8.45□□□□□ -1.06
LINC-ROR-201ENST00000553704 PPP1R42Q7Z4L9 355 aa8.45□□□□□ -1.06
LINC-ROR-201ENST00000553704 ABTB2Q8N961 1025 aa8.45□□□□□ -1.06
LINC-ROR-201ENST00000553704 SSH3Q8TE77 659 aa8.45□□□□□ -1.06
LINC-ROR-201ENST00000553704 CEMIPQ8WUJ3 1361 aa8.44□□□□□ -1.06
LINC-ROR-201ENST00000553704 SYCE3A1L190 88 aa8.44□□□□□ -1.06
LINC-ROR-201ENST00000553704 BRD1O95696 1058 aa8.44□□□□□ -1.06
LINC-ROR-201ENST00000553704 NBPF7P0C2Y1 421 aaPredicted RBP8.44□□□□□ -1.06
LINC-ROR-201ENST00000553704 C14orf37Q86TY3 774 aa8.44□□□□□ -1.06
LINC-ROR-201ENST00000553704 PI4K2BQ8TCG2 481 aa8.44□□□□□ -1.06
LINC-ROR-201ENST00000553704 RBM33Q96EV2 1170 aaKnown RBP8.44□□□□□ -1.06
LINC-ROR-201ENST00000553704 LGR6Q9HBX8 967 aa8.44□□□□□ -1.06
LINC-ROR-201ENST00000553704 EIF2S2P20042 333 aaKnown RBP8.44□□□□□ -1.06
LINC-ROR-201ENST00000553704 POLA2Q14181 598 aa8.44□□□□□ -1.06
LINC-ROR-201ENST00000553704 FOXD4L6Q3SYB3 417 aaPredicted RBP8.44□□□□□ -1.06
LINC-ROR-201ENST00000553704 FOXD4L3Q6VB84 417 aaPredicted RBP8.44□□□□□ -1.06
LINC-ROR-201ENST00000553704 CHPF2Q9P2E5 772 aa8.44□□□□□ -1.06
LINC-ROR-201ENST00000553704 GDPD2Q9HCC8 539 aa8.43□□□□□ -1.06
LINC-ROR-201ENST00000553704 RPAP1Q9BWH6 1393 aaPredicted RBP8.43□□□□□ -1.06
LINC-ROR-201ENST00000553704 SURF6O75683 361 aaKnown RBP8.43□□□□□ -1.06
LINC-ROR-201ENST00000553704 MCCP23508 829 aa8.43□□□□□ -1.06
LINC-ROR-201ENST00000553704 ANAPC15P60006 121 aa8.43□□□□□ -1.06
LINC-ROR-201ENST00000553704 NBPF6Q5VWK0 638 aa8.43□□□□□ -1.06
LINC-ROR-201ENST00000553704 HOMEZQ8IX15 550 aa8.43□□□□□ -1.06
LINC-ROR-201ENST00000553704 RHPN1Q8TCX5 695 aa8.43□□□□□ -1.06
LINC-ROR-201ENST00000553704 IL17RAQ96F46 866 aa8.43□□□□□ -1.06
LINC-ROR-201ENST00000553704 NBPF4Q96M43 638 aa8.43□□□□□ -1.06
LINC-ROR-201ENST00000553704 AOX1Q06278 1338 aa8.43□□□□□ -1.06
LINC-ROR-201ENST00000553704 ADCY9O60503 1353 aa8.43□□□□□ -1.06
LINC-ROR-201ENST00000553704 SRGAP3O43295 1099 aa8.42□□□□□ -1.06
LINC-ROR-201ENST00000553704 DTNBO60941 627 aa8.42□□□□□ -1.06
LINC-ROR-201ENST00000553704 HSPA4P34932 840 aa8.42□□□□□ -1.06
LINC-ROR-201ENST00000553704 EIF4A1P60842 406 aaKnown RBP8.42□□□□□ -1.06
LINC-ROR-201ENST00000553704 LARP6Q9BRS8 491 aaKnown RBP8.42□□□□□ -1.06
LINC-ROR-201ENST00000553704 SRCIN1Q9C0H9 1055 aa8.42□□□□□ -1.06
LINC-ROR-201ENST00000553704 CHD2O14647 1828 aaKnown RBP8.42□□□□□ -1.06
LINC-ROR-201ENST00000553704 PHRF1Q9P1Y6 1649 aaKnown RBP8.42□□□□□ -1.06
LINC-ROR-201ENST00000553704 RAD50Q92878 1312 aa8.42□□□□□ -1.06
LINC-ROR-201ENST00000553704 ZBTB7CA1YPR0 619 aa8.42□□□□□ -1.06
LINC-ROR-201ENST00000553704 GADD45BO75293 160 aaPredicted RBP8.42□□□□□ -1.06
LINC-ROR-201ENST00000553704 BEND3Q5T5X7 828 aa8.42□□□□□ -1.06
LINC-ROR-201ENST00000553704 ZSCAN30Q86W11 494 aa8.42□□□□□ -1.06
LINC-ROR-201ENST00000553704 LRRC59Q96AG4 307 aaKnown RBP8.42□□□□□ -1.06
LINC-ROR-201ENST00000553704 PDLIM2Q96JY6 352 aa8.42□□□□□ -1.06
LINC-ROR-201ENST00000553704 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.42□□□□□ -1.06
LINC-ROR-201ENST00000553704 PI4KAP2A4QPH2 592 aa8.41□□□□□ -1.06
LINC-ROR-201ENST00000553704 MCM2P49736 904 aa8.41□□□□□ -1.06
LINC-ROR-201ENST00000553704 LRSAM1Q6UWE0 723 aa8.41□□□□□ -1.06
LINC-ROR-201ENST00000553704 RASEFQ8IZ41 740 aa8.41□□□□□ -1.06
LINC-ROR-201ENST00000553704 PI4KAP1Q8N8J0 262 aa8.41□□□□□ -1.06
LINC-ROR-201ENST00000553704 SIPA1L3O60292 1781 aaPredicted RBP8.41□□□□□ -1.06
LINC-ROR-201ENST00000553704 SGSM2O43147 1006 aa8.41□□□□□ -1.06
LINC-ROR-201ENST00000553704 CPA1P15085 419 aa8.41□□□□□ -1.06
LINC-ROR-201ENST00000553704 RNF214Q8ND24 703 aa8.41□□□□□ -1.06
LINC-ROR-201ENST00000553704 INTS4Q96HW7 963 aaKnown RBP8.41□□□□□ -1.06
LINC-ROR-201ENST00000553704 LSG1Q9H089 658 aaKnown RBP8.41□□□□□ -1.06
LINC-ROR-201ENST00000553704 BABAM1Q9NWV8 329 aa8.41□□□□□ -1.06
LINC-ROR-201ENST00000553704 SNX14Q9Y5W7 946 aa8.41□□□□□ -1.06
LINC-ROR-201ENST00000553704 PLEKHG5O94827 1062 aa8.4□□□□□ -1.06
LINC-ROR-201ENST00000553704 PROSER3Q2NL68 480 aa8.4□□□□□ -1.06
LINC-ROR-201ENST00000553704 DNAAF4Q8WXU2 420 aa8.4□□□□□ -1.06
LINC-ROR-201ENST00000553704 PHF8Q9UPP1 1060 aa8.4□□□□□ -1.06
LINC-ROR-201ENST00000553704 PRAMEF22A3QJZ6 481 aa8.4□□□□□ -1.07
LINC-ROR-201ENST00000553704 LARGE1O95461 756 aa8.4□□□□□ -1.07
LINC-ROR-201ENST00000553704 MPRIPQ6WCQ1 1025 aa8.4□□□□□ -1.07
LINC-ROR-201ENST00000553704 THEMISQ8N1K5 641 aaPredicted RBP8.4□□□□□ -1.07
LINC-ROR-201ENST00000553704 IP6K1Q92551 441 aa8.4□□□□□ -1.07
LINC-ROR-201ENST00000553704 ANP32BQ92688 251 aaKnown RBP8.4□□□□□ -1.07
LINC-ROR-201ENST00000553704 TTC14Q96N46 770 aa8.4□□□□□ -1.07
LINC-ROR-201ENST00000553704 SPG7Q9UQ90 795 aa8.4□□□□□ -1.07
LINC-ROR-201ENST00000553704 C5P01031 1676 aa8.4□□□□□ -1.07
LINC-ROR-201ENST00000553704 RAB11FIP3O75154 756 aa8.39□□□□□ -1.07
LINC-ROR-201ENST00000553704 KIF1BPQ96EK5 621 aa8.39□□□□□ -1.07
LINC-ROR-201ENST00000553704 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.39□□□□□ -1.07
LINC-ROR-201ENST00000553704 RGPD5Q99666 1765 aa8.39□□□□□ -1.07
LINC-ROR-201ENST00000553704 CAMTA1Q9Y6Y1 1673 aa8.39□□□□□ -1.07
LINC-ROR-201ENST00000553704 MBD3O95983 291 aa8.39□□□□□ -1.07
LINC-ROR-201ENST00000553704 AK2P54819 239 aa8.39□□□□□ -1.07
LINC-ROR-201ENST00000553704 ZNF530Q6P9A1 599 aaPredicted RBP8.39□□□□□ -1.07
LINC-ROR-201ENST00000553704 CWC27Q6UX04 472 aaKnown RBP8.39□□□□□ -1.07
LINC-ROR-201ENST00000553704 RUFY3Q7L099 469 aa8.39□□□□□ -1.07
LINC-ROR-201ENST00000553704 PA2G4Q9UQ80 394 aaKnown RBP8.39□□□□□ -1.07
LINC-ROR-201ENST00000553704 COL9A3Q14050 684 aaPredicted RBP8.38□□□□□ -1.07
LINC-ROR-201ENST00000553704 BTBD11A6QL63 1104 aa8.38□□□□□ -1.07
LINC-ROR-201ENST00000553704 PTH1RQ03431 593 aa8.38□□□□□ -1.07
LINC-ROR-201ENST00000553704 CWF19L2Q2TBE0 894 aaKnown RBP8.38□□□□□ -1.07
LINC-ROR-201ENST00000553704 KIAA1211Q6ZU35 1233 aa8.38□□□□□ -1.07
LINC-ROR-201ENST00000553704 USP48Q86UV5 1035 aa8.38□□□□□ -1.07
LINC-ROR-201ENST00000553704 CNPY2Q9Y2B0 182 aa8.38□□□□□ -1.07
LINC-ROR-201ENST00000553704 USP42Q9H9J4 1324 aaKnown RBP8.38□□□□□ -1.07
LINC-ROR-201ENST00000553704 MSNP26038 577 aaKnown RBP8.37□□□□□ -1.07
LINC-ROR-201ENST00000553704 XPCQ01831 940 aaPredicted RBP8.37□□□□□ -1.07
LINC-ROR-201ENST00000553704 CNTROBQ8N137 903 aa8.37□□□□□ -1.07
LINC-ROR-201ENST00000553704 DDX54Q8TDD1 881 aaKnown RBP8.37□□□□□ -1.07
LINC-ROR-201ENST00000553704 WDR33Q9C0J8 1336 aaKnown RBP8.37□□□□□ -1.07
LINC-ROR-201ENST00000553704 NCAPD2Q15021 1401 aa8.37□□□□□ -1.07
LINC-ROR-201ENST00000553704 HOXB7P09629 217 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms