RNA–Protein interactions for RNA: ENST00000553691.5

VIPAS39-205, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-205ENST00000553691 PRR36Q9H6K5 1346 aa9.34□□□□□ -0.91
VIPAS39-205ENST00000553691 ABCA3Q99758 1704 aa9.34□□□□□ -0.91
VIPAS39-205ENST00000553691 ANKARQ7Z5J8 1434 aa9.34□□□□□ -0.91
VIPAS39-205ENST00000553691 KDM4AO75164 1064 aa9.34□□□□□ -0.91
VIPAS39-205ENST00000553691 ESCO1Q5FWF5 840 aa9.34□□□□□ -0.91
VIPAS39-205ENST00000553691 GIGYF2Q6Y7W6 1299 aaKnown RBP9.34□□□□□ -0.91
VIPAS39-205ENST00000553691 TRAK1Q9UPV9 953 aa9.34□□□□□ -0.91
VIPAS39-205ENST00000553691 TOPAZ1Q8N9V7 1692 aa9.34□□□□□ -0.91
VIPAS39-205ENST00000553691 TULP4Q9NRJ4 1543 aa9.34□□□□□ -0.91
VIPAS39-205ENST00000553691 ADH1BP00325 375 aa9.33□□□□□ -0.92
VIPAS39-205ENST00000553691 GUCA2AQ02747 115 aa9.33□□□□□ -0.92
VIPAS39-205ENST00000553691 SAFB2Q14151 953 aaKnown RBP eCLIP9.33□□□□□ -0.92
VIPAS39-205ENST00000553691 AMHR2Q16671 573 aa9.33□□□□□ -0.92
VIPAS39-205ENST00000553691 NBPF1Q3BBV0 1214 aa9.33□□□□□ -0.92
VIPAS39-205ENST00000553691 PARP9Q8IXQ6 854 aa9.33□□□□□ -0.92
VIPAS39-205ENST00000553691 SIN3AQ96ST3 1273 aa9.33□□□□□ -0.92
VIPAS39-205ENST00000553691 CRYBG1Q9Y4K1 1723 aa9.33□□□□□ -0.92
VIPAS39-205ENST00000553691 ATP7BP35670 1465 aa9.33□□□□□ -0.92
VIPAS39-205ENST00000553691 ALS2Q96Q42 1657 aa9.32□□□□□ -0.92
VIPAS39-205ENST00000553691 FOXO3O43524 673 aa9.32□□□□□ -0.92
VIPAS39-205ENST00000553691 XPCQ01831 940 aaPredicted RBP9.32□□□□□ -0.92
VIPAS39-205ENST00000553691 VPS72Q15906 364 aa9.32□□□□□ -0.92
VIPAS39-205ENST00000553691 L3MBTL2Q969R5 705 aa9.32□□□□□ -0.92
VIPAS39-205ENST00000553691 SPSB2Q99619 263 aa9.32□□□□□ -0.92
VIPAS39-205ENST00000553691 NUP188Q5SRE5 1749 aa9.31□□□□□ -0.92
VIPAS39-205ENST00000553691 RNF223E7ERA6 249 aa9.31□□□□□ -0.92
VIPAS39-205ENST00000553691 GGCXP38435 758 aa9.31□□□□□ -0.92
VIPAS39-205ENST00000553691 RNF19BQ6ZMZ0 732 aa9.31□□□□□ -0.92
VIPAS39-205ENST00000553691 HIRIP3Q9BW71 556 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-205ENST00000553691 PRKD2Q9BZL6 878 aa9.31□□□□□ -0.92
VIPAS39-205ENST00000553691 RREB1Q92766 1687 aa9.31□□□□□ -0.92
VIPAS39-205ENST00000553691 SPATA31A3Q5VYP0 1347 aa9.31□□□□□ -0.92
VIPAS39-205ENST00000553691 QRICH2Q9H0J4 1663 aa9.3□□□□□ -0.92
VIPAS39-205ENST00000553691 NBPF8Q3BBV2 869 aa9.3□□□□□ -0.92
VIPAS39-205ENST00000553691 NBPF14Q5TI25 921 aa9.3□□□□□ -0.92
VIPAS39-205ENST00000553691 NUTM1Q86Y26 1132 aa9.3□□□□□ -0.92
VIPAS39-205ENST00000553691 SLC6A16Q9GZN6 736 aa9.3□□□□□ -0.92
VIPAS39-205ENST00000553691 ITSN1Q15811 1721 aa9.3□□□□□ -0.92
VIPAS39-205ENST00000553691 TNS3Q68CZ2 1445 aa9.3□□□□□ -0.92
VIPAS39-205ENST00000553691 PLCH1Q4KWH8 1693 aa9.29□□□□□ -0.92
VIPAS39-205ENST00000553691 SBNO1A3KN83 1393 aa9.29□□□□□ -0.92
VIPAS39-205ENST00000553691 WASLO00401 505 aaPredicted RBP9.29□□□□□ -0.92
VIPAS39-205ENST00000553691 RGS20O76081 388 aa9.29□□□□□ -0.92
VIPAS39-205ENST00000553691 PDE4DQ08499 809 aa9.29□□□□□ -0.92
VIPAS39-205ENST00000553691 GRIPAP1Q4V328 841 aa9.29□□□□□ -0.92
VIPAS39-205ENST00000553691 THAP11Q96EK4 314 aa9.29□□□□□ -0.92
VIPAS39-205ENST00000553691 SPON1Q9HCB6 807 aa9.29□□□□□ -0.92
VIPAS39-205ENST00000553691 PRDM9Q9NQV7 894 aa9.29□□□□□ -0.92
VIPAS39-205ENST00000553691 POGKQ9P215 609 aa9.29□□□□□ -0.92
VIPAS39-205ENST00000553691 NINLQ9Y2I6 1382 aa9.28□□□□□ -0.92
VIPAS39-205ENST00000553691 SLIT2O94813 1529 aa9.28□□□□□ -0.92
VIPAS39-205ENST00000553691 HOXA2O43364 376 aa9.28□□□□□ -0.92
VIPAS39-205ENST00000553691 FMNL1O95466 1100 aaPredicted RBP9.28□□□□□ -0.92
VIPAS39-205ENST00000553691 MS4A1P11836 297 aa9.28□□□□□ -0.92
VIPAS39-205ENST00000553691 EZH2Q15910 746 aaKnown RBP9.28□□□□□ -0.92
VIPAS39-205ENST00000553691 GPRASP1Q5JY77 1395 aa9.27□□□□□ -0.93
VIPAS39-205ENST00000553691 BRICD5Q6PL45 260 aa9.27□□□□□ -0.93
VIPAS39-205ENST00000553691 KRT28Q7Z3Y7 464 aa9.27□□□□□ -0.93
VIPAS39-205ENST00000553691 FAM160A2Q8N612 972 aaPredicted RBP9.27□□□□□ -0.93
VIPAS39-205ENST00000553691 BEGAINQ9BUH8 593 aa9.27□□□□□ -0.93
VIPAS39-205ENST00000553691 EIF3AQ14152 1382 aaKnown RBP9.26□□□□□ -0.93
VIPAS39-205ENST00000553691 NRAPQ86VF7 1730 aa9.26□□□□□ -0.93
VIPAS39-205ENST00000553691 NWD2Q9ULI1 1742 aa9.26□□□□□ -0.93
VIPAS39-205ENST00000553691 PMFBP1Q8TBY8 1022 aa9.26□□□□□ -0.93
VIPAS39-205ENST00000553691 SPIRE2Q8WWL2 714 aa9.26□□□□□ -0.93
VIPAS39-205ENST00000553691 SYMPKQ92797 1274 aaKnown RBP9.26□□□□□ -0.93
VIPAS39-205ENST00000553691 POLR3AO14802 1390 aaPredicted RBP9.25□□□□□ -0.93
VIPAS39-205ENST00000553691 PHRF1Q9P1Y6 1649 aaKnown RBP9.25□□□□□ -0.93
VIPAS39-205ENST00000553691 KCNQ2O43526 872 aa9.25□□□□□ -0.93
VIPAS39-205ENST00000553691 APBA3O96018 575 aa9.25□□□□□ -0.93
VIPAS39-205ENST00000553691 NDUFV2P19404 249 aa9.25□□□□□ -0.93
VIPAS39-205ENST00000553691 FAM182BQ5T319 152 aa9.25□□□□□ -0.93
VIPAS39-205ENST00000553691 MYOM1P52179 1685 aa9.25□□□□□ -0.93
VIPAS39-205ENST00000553691 GIGYF1O75420 1035 aaPredicted RBP9.24□□□□□ -0.93
VIPAS39-205ENST00000553691 USP46P62068 366 aa9.24□□□□□ -0.93
VIPAS39-205ENST00000553691 PSME1Q06323 249 aa9.24□□□□□ -0.93
VIPAS39-205ENST00000553691 NEUROD1Q13562 356 aa9.24□□□□□ -0.93
VIPAS39-205ENST00000553691 PLA2G2CQ5R387 149 aa9.24□□□□□ -0.93
VIPAS39-205ENST00000553691 EMID1Q96A84 441 aaPredicted RBP9.24□□□□□ -0.93
VIPAS39-205ENST00000553691 NUDT16Q96DE0 195 aaKnown RBP9.24□□□□□ -0.93
VIPAS39-205ENST00000553691 CDK19Q9BWU1 502 aa9.24□□□□□ -0.93
VIPAS39-205ENST00000553691 NRKQ7Z2Y5 1582 aa9.24□□□□□ -0.93
VIPAS39-205ENST00000553691 PARD3Q8TEW0 1356 aa9.24□□□□□ -0.93
VIPAS39-205ENST00000553691 TRIM37O94972 964 aa9.23□□□□□ -0.93
VIPAS39-205ENST00000553691 FAM196AQ6ZSG2 479 aa9.23□□□□□ -0.93
VIPAS39-205ENST00000553691 ANKLE1Q8NAG6 615 aa9.23□□□□□ -0.93
VIPAS39-205ENST00000553691 CABLES1Q8TDN4 633 aa9.23□□□□□ -0.93
VIPAS39-205ENST00000553691 CAMKK2Q96RR4 588 aa9.23□□□□□ -0.93
VIPAS39-205ENST00000553691 IRX2Q9BZI1 471 aaPredicted RBP9.23□□□□□ -0.93
VIPAS39-205ENST00000553691 CENPJQ9HC77 1338 aaPredicted RBP9.23□□□□□ -0.93
VIPAS39-205ENST00000553691 ARHGEF10O15013 1369 aa9.23□□□□□ -0.93
VIPAS39-205ENST00000553691 DISP2A7MBM2 1401 aa9.22□□□□□ -0.93
VIPAS39-205ENST00000553691 PLEKHG3A1L390 1219 aa9.22□□□□□ -0.93
VIPAS39-205ENST00000553691 MOXD2PA6NHM9 499 aa9.22□□□□□ -0.93
VIPAS39-205ENST00000553691 Q3C1V9 767 aa9.22□□□□□ -0.93
VIPAS39-205ENST00000553691 ROCK2O75116 1388 aaKnown RBP9.22□□□□□ -0.93
VIPAS39-205ENST00000553691 AKAP12Q02952 1782 aa9.22□□□□□ -0.93
VIPAS39-205ENST00000553691 SSH2Q76I76 1423 aa9.22□□□□□ -0.93
VIPAS39-205ENST00000553691 FDX1P10109 184 aa9.21□□□□□ -0.94
VIPAS39-205ENST00000553691 SLC19A1P41440 591 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms