RNA–Protein interactions for RNA: ENST00000553681.5

APEX1-206, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-206ENST00000553681 CC2D1BQ5T0F9 858 aaKnown RBP15.34■□□□□ 0.05
APEX1-206ENST00000553681 C16orf71Q8IYS4 520 aaPredicted RBP15.34■□□□□ 0.05
APEX1-206ENST00000553681 SLC52A2Q9HAB3 445 aa15.34■□□□□ 0.05
APEX1-206ENST00000553681 ZNF219Q9P2Y4 722 aaPredicted RBP15.34■□□□□ 0.05
APEX1-206ENST00000553681 CANXP27824 592 aaKnown RBP15.33■□□□□ 0.04
APEX1-206ENST00000553681 PRELPP51888 382 aa15.33■□□□□ 0.04
APEX1-206ENST00000553681 NFIXQ14938 502 aa15.33■□□□□ 0.04
APEX1-206ENST00000553681 DNAJC5GQ8N7S2 189 aa15.33■□□□□ 0.04
APEX1-206ENST00000553681 ZNF330Q9Y3S2 320 aaPredicted RBP15.33■□□□□ 0.04
APEX1-206ENST00000553681 SOS1Q07889 1333 aaPredicted RBP15.33■□□□□ 0.04
APEX1-206ENST00000553681 CARMIL3Q8ND23 1372 aa15.33■□□□□ 0.04
APEX1-206ENST00000553681 CCDC88AQ3V6T2 1871 aa15.32■□□□□ 0.04
APEX1-206ENST00000553681 CYP19A1P11511 503 aaPredicted RBP15.32■□□□□ 0.04
APEX1-206ENST00000553681 TM4SF1P30408 202 aa15.32■□□□□ 0.04
APEX1-206ENST00000553681 MTHFSDQ2M296 383 aaKnown RBP15.32■□□□□ 0.04
APEX1-206ENST00000553681 AKAP4Q5JQC9 854 aa15.32■□□□□ 0.04
APEX1-206ENST00000553681 BCL2L12Q9HB09 334 aa15.32■□□□□ 0.04
APEX1-206ENST00000553681 TIMELESSQ9UNS1 1208 aa15.32■□□□□ 0.04
APEX1-206ENST00000553681 COL15A1P39059 1388 aa15.32■□□□□ 0.04
APEX1-206ENST00000553681 AMER1Q5JTC6 1135 aaPredicted RBP15.31■□□□□ 0.04
APEX1-206ENST00000553681 PLEKHG2Q9H7P9 1386 aa15.29■□□□□ 0.04
APEX1-206ENST00000553681 KIF7Q2M1P5 1343 aa15.29■□□□□ 0.04
APEX1-206ENST00000553681 CAPN15O75808 1086 aa15.29■□□□□ 0.04
APEX1-206ENST00000553681 SERPINB2P05120 415 aa15.29■□□□□ 0.04
APEX1-206ENST00000553681 MRC1P22897 1456 aa15.28■□□□□ 0.04
APEX1-206ENST00000553681 C2CD5Q86YS7 1000 aa15.28■□□□□ 0.04
APEX1-206ENST00000553681 RBM46Q8TBY0 533 aaKnown RBP15.28■□□□□ 0.04
APEX1-206ENST00000553681 KDM2BQ8NHM5 1336 aa15.27■□□□□ 0.04
APEX1-206ENST00000553681 PIP4K2AP48426 406 aaPredicted RBP15.27■□□□□ 0.04
APEX1-206ENST00000553681 NARFQ9UHQ1 456 aa15.27■□□□□ 0.04
APEX1-206ENST00000553681 CACNA1SQ13698 1873 aa15.27■□□□□ 0.03
APEX1-206ENST00000553681 TIAM2Q8IVF5 1701 aa15.26■□□□□ 0.03
APEX1-206ENST00000553681 U2SURPO15042 1029 aaKnown RBP15.26■□□□□ 0.03
APEX1-206ENST00000553681 COL13A1Q5TAT6 717 aaPredicted RBP15.26■□□□□ 0.03
APEX1-206ENST00000553681 TBC1D9BQ66K14 1250 aa15.26■□□□□ 0.03
APEX1-206ENST00000553681 TBC1D2BQ9UPU7 963 aa15.26■□□□□ 0.03
APEX1-206ENST00000553681 ANKRD31Q8N7Z5 1873 aa15.26■□□□□ 0.03
APEX1-206ENST00000553681 NRXN2Q9P2S2 1712 aa15.26■□□□□ 0.03
APEX1-206ENST00000553681 TNRC6CQ9HCJ0 1690 aaKnown RBP15.25■□□□□ 0.03
APEX1-206ENST00000553681 DIAPH1O60610 1272 aaKnown RBP15.25■□□□□ 0.03
APEX1-206ENST00000553681 ZNF622Q969S3 477 aaKnown RBP eCLIP15.25■□□□□ 0.03
APEX1-206ENST00000553681 KLRG1Q96E93 195 aa15.25■□□□□ 0.03
APEX1-206ENST00000553681 ZNF496Q96IT1 587 aaPredicted RBP15.25■□□□□ 0.03
APEX1-206ENST00000553681 UBR2Q8IWV8 1755 aa15.25■□□□□ 0.03
APEX1-206ENST00000553681 DLEC1Q9Y238 1755 aa15.25■□□□□ 0.03
APEX1-206ENST00000553681 COL11A2P13942 1736 aaPredicted RBP15.25■□□□□ 0.03
APEX1-206ENST00000553681 NFKBIEO00221 500 aa15.24■□□□□ 0.03
APEX1-206ENST00000553681 KCNQ3O43525 872 aa15.24■□□□□ 0.03
APEX1-206ENST00000553681 TTC5Q8N0Z6 440 aa15.23■□□□□ 0.03
APEX1-206ENST00000553681 TTLL6Q8N841 843 aa15.23■□□□□ 0.03
APEX1-206ENST00000553681 C21orf2O43822 256 aa15.22■□□□□ 0.03
APEX1-206ENST00000553681 A1BGP04217 495 aa15.22■□□□□ 0.03
APEX1-206ENST00000553681 IL17REQ8NFR9 667 aa15.22■□□□□ 0.03
APEX1-206ENST00000553681 PRAMEF22A3QJZ6 481 aa15.21■□□□□ 0.03
APEX1-206ENST00000553681 H0YIN7 160 aa15.21■□□□□ 0.03
APEX1-206ENST00000553681 LMNB1P20700 586 aa15.21■□□□□ 0.03
APEX1-206ENST00000553681 FSTL1Q12841 308 aa15.21■□□□□ 0.03
APEX1-206ENST00000553681 COL3A1P02461 1466 aaPredicted RBP15.2■□□□□ 0.02
APEX1-206ENST00000553681 SCN7AQ01118 1682 aa15.2■□□□□ 0.02
APEX1-206ENST00000553681 PER1O15534 1290 aaPredicted RBP15.2■□□□□ 0.02
APEX1-206ENST00000553681 EIF5P55010 431 aaKnown RBP15.2■□□□□ 0.02
APEX1-206ENST00000553681 TEFQ10587 303 aa15.2■□□□□ 0.02
APEX1-206ENST00000553681 SMC1BQ8NDV3 1235 aa15.2■□□□□ 0.02
APEX1-206ENST00000553681 SLX4Q8IY92 1834 aa15.2■□□□□ 0.02
APEX1-206ENST00000553681 GLTPD2A6NH11 291 aa15.19■□□□□ 0.02
APEX1-206ENST00000553681 POTEIP0CG38 1075 aa15.19■□□□□ 0.02
APEX1-206ENST00000553681 POTEJP0CG39 1038 aa15.19■□□□□ 0.02
APEX1-206ENST00000553681 PRR5LQ6MZQ0 368 aa15.19■□□□□ 0.02
APEX1-206ENST00000553681 PHACTR3Q96KR7 559 aa15.19■□□□□ 0.02
APEX1-206ENST00000553681 HEG1Q9ULI3 1381 aa15.19■□□□□ 0.02
APEX1-206ENST00000553681 SIPA1L3O60292 1781 aaPredicted RBP15.19■□□□□ 0.02
APEX1-206ENST00000553681 POTECB2RU33 542 aa15.18■□□□□ 0.02
APEX1-206ENST00000553681 NPHP1O15259 732 aa15.18■□□□□ 0.02
APEX1-206ENST00000553681 STARD3NLO95772 234 aa15.18■□□□□ 0.02
APEX1-206ENST00000553681 ZNF790Q6PG37 636 aa15.18■□□□□ 0.02
APEX1-206ENST00000553681 FAM177BA6PVY3 158 aa15.17■□□□□ 0.02
APEX1-206ENST00000553681 GNAT3A8MTJ3 354 aa15.17■□□□□ 0.02
APEX1-206ENST00000553681 VEGFAP15692 232 aaPredicted RBP15.17■□□□□ 0.02
APEX1-206ENST00000553681 VSIG10Q8N0Z9 540 aa15.17■□□□□ 0.02
APEX1-206ENST00000553681 PRKAR2BP31323 418 aa15.16■□□□□ 0.02
APEX1-206ENST00000553681 ERFEQ4G0M1 354 aa15.16■□□□□ 0.02
APEX1-206ENST00000553681 OLFM4Q6UX06 510 aa15.16■□□□□ 0.02
APEX1-206ENST00000553681 JMYQ8N9B5 988 aa15.16■□□□□ 0.02
APEX1-206ENST00000553681 FER1L6Q2WGJ9 1857 aa15.16■□□□□ 0.02
APEX1-206ENST00000553681 DDNO94850 711 aaPredicted RBP15.15■□□□□ 0.02
APEX1-206ENST00000553681 CAMTA2O94983 1202 aa15.15■□□□□ 0.02
APEX1-206ENST00000553681 HSPA1AP0DMV8 641 aaKnown RBP15.15■□□□□ 0.02
APEX1-206ENST00000553681 HSPA1BP0DMV9 641 aaKnown RBP15.15■□□□□ 0.02
APEX1-206ENST00000553681 DCTN1Q14203 1278 aa15.15■□□□□ 0.02
APEX1-206ENST00000553681 MCM10Q7L590 875 aa15.15■□□□□ 0.02
APEX1-206ENST00000553681 USP16Q9Y5T5 823 aa15.15■□□□□ 0.02
APEX1-206ENST00000553681 DICER1Q9UPY3 1922 aaKnown RBP15.14■□□□□ 0.01
APEX1-206ENST00000553681 A0A087WZG4 1122 aa15.14■□□□□ 0.01
APEX1-206ENST00000553681 BTBD11A6QL63 1104 aa15.14■□□□□ 0.01
APEX1-206ENST00000553681 DZIP3Q86Y13 1208 aaKnown RBP15.14■□□□□ 0.01
APEX1-206ENST00000553681 TNS4Q8IZW8 715 aa15.14■□□□□ 0.01
APEX1-206ENST00000553681 CNBD1Q8NA66 436 aa15.14■□□□□ 0.01
APEX1-206ENST00000553681 BCORQ6W2J9 1755 aa15.13■□□□□ 0.01
APEX1-206ENST00000553681 PRPF40BQ6NWY9 871 aaKnown RBP15.13■□□□□ 0.01
APEX1-206ENST00000553681 GAS2L2Q8NHY3 880 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms