RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 SYT17Q9BSW7 474 aa8.64□□□□□ -1.03
SMARCE1P3-201ENST00000553649 KRTAP4-6Q9BYQ5 205 aa8.64□□□□□ -1.03
SMARCE1P3-201ENST00000553649 DAXXQ9UER7 740 aaPredicted RBP8.64□□□□□ -1.03
SMARCE1P3-201ENST00000553649 DAPK1P53355 1430 aa8.63□□□□□ -1.03
SMARCE1P3-201ENST00000553649 NUP188Q5SRE5 1749 aa8.63□□□□□ -1.03
SMARCE1P3-201ENST00000553649 DDX11L8A8MPP1 907 aa8.63□□□□□ -1.03
SMARCE1P3-201ENST00000553649 GCGRP47871 477 aa8.63□□□□□ -1.03
SMARCE1P3-201ENST00000553649 HIC1Q14526 733 aa8.63□□□□□ -1.03
SMARCE1P3-201ENST00000553649 COL13A1Q5TAT6 717 aaPredicted RBP8.63□□□□□ -1.03
SMARCE1P3-201ENST00000553649 SNIP1Q8TAD8 396 aaKnown RBP8.63□□□□□ -1.03
SMARCE1P3-201ENST00000553649 SALL2Q9Y467 1007 aaPredicted RBP8.63□□□□□ -1.03
SMARCE1P3-201ENST00000553649 ANKRD30AQ9BXX3 1397 aa8.62□□□□□ -1.03
SMARCE1P3-201ENST00000553649 FOXO3O43524 673 aa8.62□□□□□ -1.03
SMARCE1P3-201ENST00000553649 TRIM47Q96LD4 638 aa8.62□□□□□ -1.03
SMARCE1P3-201ENST00000553649 PHOX2BQ99453 314 aa8.62□□□□□ -1.03
SMARCE1P3-201ENST00000553649 FHDC1Q9C0D6 1143 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1P3-201ENST00000553649 PDGFDQ9GZP0 370 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1P3-201ENST00000553649 SHANK3Q9BYB0 1731 aa8.62□□□□□ -1.03
SMARCE1P3-201ENST00000553649 MYOM1P52179 1685 aa8.62□□□□□ -1.03
SMARCE1P3-201ENST00000553649 SPATA31A3Q5VYP0 1347 aa8.61□□□□□ -1.03
SMARCE1P3-201ENST00000553649 FAM50AQ14320 339 aaKnown RBP8.61□□□□□ -1.03
SMARCE1P3-201ENST00000553649 MSS51Q4VC12 460 aa8.61□□□□□ -1.03
SMARCE1P3-201ENST00000553649 HPS1Q92902 700 aa8.61□□□□□ -1.03
SMARCE1P3-201ENST00000553649 MRGPRX2Q96LB1 330 aa8.61□□□□□ -1.03
SMARCE1P3-201ENST00000553649 IQGAP3Q86VI3 1631 aa8.61□□□□□ -1.03
SMARCE1P3-201ENST00000553649 FAM83GA6ND36 823 aa8.6□□□□□ -1.03
SMARCE1P3-201ENST00000553649 GPR37O15354 613 aa8.6□□□□□ -1.03
SMARCE1P3-201ENST00000553649 TRIM32Q13049 653 aa8.6□□□□□ -1.03
SMARCE1P3-201ENST00000553649 ESCO1Q5FWF5 840 aa8.6□□□□□ -1.03
SMARCE1P3-201ENST00000553649 RBM26Q5T8P6 1007 aaKnown RBP8.6□□□□□ -1.03
SMARCE1P3-201ENST00000553649 PLCH1Q4KWH8 1693 aa8.59□□□□□ -1.03
SMARCE1P3-201ENST00000553649 THSD7AQ9UPZ6 1657 aa8.59□□□□□ -1.03
SMARCE1P3-201ENST00000553649 ZBTB24O43167 697 aaPredicted RBP8.59□□□□□ -1.03
SMARCE1P3-201ENST00000553649 ZBTB7AO95365 584 aa8.59□□□□□ -1.03
SMARCE1P3-201ENST00000553649 FAM196AQ6ZSG2 479 aa8.59□□□□□ -1.03
SMARCE1P3-201ENST00000553649 CABLES1Q8TDN4 633 aa8.59□□□□□ -1.03
SMARCE1P3-201ENST00000553649 NWD2Q9ULI1 1742 aa8.59□□□□□ -1.03
SMARCE1P3-201ENST00000553649 ROBO2Q9HCK4 1378 aa8.59□□□□□ -1.03
SMARCE1P3-201ENST00000553649 CASZ1Q86V15 1759 aa8.58□□□□□ -1.04
SMARCE1P3-201ENST00000553649 LORP23490 312 aaPredicted RBP8.58□□□□□ -1.04
SMARCE1P3-201ENST00000553649 KDM2AQ9Y2K7 1162 aa8.58□□□□□ -1.04
SMARCE1P3-201ENST00000553649 SPATA31A5Q5VU36 1347 aa8.57□□□□□ -1.04
SMARCE1P3-201ENST00000553649 SPATA31A7Q8IWB4 1347 aa8.57□□□□□ -1.04
SMARCE1P3-201ENST00000553649 CDC42BPGQ6DT37 1551 aa8.57□□□□□ -1.04
SMARCE1P3-201ENST00000553649 ANKRD50Q9ULJ7 1429 aa8.57□□□□□ -1.04
SMARCE1P3-201ENST00000553649 GNPATO15228 680 aa8.57□□□□□ -1.04
SMARCE1P3-201ENST00000553649 TNS4Q8IZW8 715 aa8.57□□□□□ -1.04
SMARCE1P3-201ENST00000553649 DLC1Q96QB1 1528 aa8.57□□□□□ -1.04
SMARCE1P3-201ENST00000553649 CHD4Q14839 1912 aa8.56□□□□□ -1.04
SMARCE1P3-201ENST00000553649 NEXMIFQ5QGS0 1516 aa8.56□□□□□ -1.04
SMARCE1P3-201ENST00000553649 MMP16P51512 607 aa8.56□□□□□ -1.04
SMARCE1P3-201ENST00000553649 HAP1P54257 671 aaPredicted RBP8.56□□□□□ -1.04
SMARCE1P3-201ENST00000553649 DNAJC5GQ8N7S2 189 aa8.56□□□□□ -1.04
SMARCE1P3-201ENST00000553649 NRAPQ86VF7 1730 aa8.56□□□□□ -1.04
SMARCE1P3-201ENST00000553649 LRPPRCP42704 1394 aaKnown RBP8.56□□□□□ -1.04
SMARCE1P3-201ENST00000553649 HFM1A2PYH4 1435 aa8.55□□□□□ -1.04
SMARCE1P3-201ENST00000553649 SKOR1P84550 965 aa8.55□□□□□ -1.04
SMARCE1P3-201ENST00000553649 SENP2Q9HC62 589 aa8.55□□□□□ -1.04
SMARCE1P3-201ENST00000553649 MAP3K5Q99683 1374 aa8.55□□□□□ -1.04
SMARCE1P3-201ENST00000553649 E9PCH4 1651 aa8.55□□□□□ -1.04
SMARCE1P3-201ENST00000553649 ATP10DQ9P241 1426 aa8.54□□□□□ -1.04
SMARCE1P3-201ENST00000553649 GPR162Q16538 588 aa8.54□□□□□ -1.04
SMARCE1P3-201ENST00000553649 BTG4Q9NY30 223 aa8.54□□□□□ -1.04
SMARCE1P3-201ENST00000553649 TNS3Q68CZ2 1445 aa8.53□□□□□ -1.04
SMARCE1P3-201ENST00000553649 TESPA1A2RU30 521 aaPredicted RBP8.52□□□□□ -1.05
SMARCE1P3-201ENST00000553649 DXOO77932 396 aaKnown RBP8.52□□□□□ -1.05
SMARCE1P3-201ENST00000553649 RC3H1Q5TC82 1133 aaKnown RBP8.52□□□□□ -1.05
SMARCE1P3-201ENST00000553649 CCDC144AA2RUR9 1427 aa8.52□□□□□ -1.05
SMARCE1P3-201ENST00000553649 GMPRP36959 345 aa8.51□□□□□ -1.05
SMARCE1P3-201ENST00000553649 ITGAEP38570 1179 aa8.51□□□□□ -1.05
SMARCE1P3-201ENST00000553649 KRT28Q7Z3Y7 464 aa8.51□□□□□ -1.05
SMARCE1P3-201ENST00000553649 SULF1Q8IWU6 871 aa8.51□□□□□ -1.05
SMARCE1P3-201ENST00000553649 ZNF326Q5BKZ1 582 aaKnown RBP8.5□□□□□ -1.05
SMARCE1P3-201ENST00000553649 VSIG10Q8N0Z9 540 aa8.5□□□□□ -1.05
SMARCE1P3-201ENST00000553649 KIFC2Q96AC6 838 aa8.5□□□□□ -1.05
SMARCE1P3-201ENST00000553649 ARXQ96QS3 562 aa8.5□□□□□ -1.05
SMARCE1P3-201ENST00000553649 MTFR1LQ9H019 292 aa8.5□□□□□ -1.05
SMARCE1P3-201ENST00000553649 RRBP1Q9P2E9 1410 aaKnown RBP8.5□□□□□ -1.05
SMARCE1P3-201ENST00000553649 SPATA31A1Q5TZJ5 1347 aa8.5□□□□□ -1.05
SMARCE1P3-201ENST00000553649 ABCA3Q99758 1704 aa8.49□□□□□ -1.05
SMARCE1P3-201ENST00000553649 TECPR2O15040 1411 aa8.49□□□□□ -1.05
SMARCE1P3-201ENST00000553649 HLA-CQ95604 372 aa8.49□□□□□ -1.05
SMARCE1P3-201ENST00000553649 GPBP1L1Q9HC44 474 aaPredicted RBP8.49□□□□□ -1.05
SMARCE1P3-201ENST00000553649 NUP155O75694 1391 aa8.48□□□□□ -1.05
SMARCE1P3-201ENST00000553649 TRIM46Q7Z4K8 759 aa8.48□□□□□ -1.05
SMARCE1P3-201ENST00000553649 USB1Q9BQ65 265 aaKnown RBP8.48□□□□□ -1.05
SMARCE1P3-201ENST00000553649 REPIN1Q9BWE0 567 aaKnown RBP8.48□□□□□ -1.05
SMARCE1P3-201ENST00000553649 SBNO1A3KN83 1393 aa8.48□□□□□ -1.05
SMARCE1P3-201ENST00000553649 ADCY9O60503 1353 aa8.48□□□□□ -1.05
SMARCE1P3-201ENST00000553649 NAIPQ13075 1403 aa8.47□□□□□ -1.05
SMARCE1P3-201ENST00000553649 KIF1AQ12756 1690 aa8.47□□□□□ -1.05
SMARCE1P3-201ENST00000553649 GOLGB1Q14789 3259 aaKnown RBP8.47□□□□□ -1.05
SMARCE1P3-201ENST00000553649 PLSCR1O15162 318 aa8.47□□□□□ -1.05
SMARCE1P3-201ENST00000553649 VEGFBP49765 207 aa8.47□□□□□ -1.05
SMARCE1P3-201ENST00000553649 Q3C1V9 767 aa8.47□□□□□ -1.05
SMARCE1P3-201ENST00000553649 JMYQ8N9B5 988 aa8.47□□□□□ -1.05
SMARCE1P3-201ENST00000553649 NXF1Q9UBU9 619 aaKnown RBP8.47□□□□□ -1.05
SMARCE1P3-201ENST00000553649 SIAH2O43255 324 aa8.46□□□□□ -1.06
SMARCE1P3-201ENST00000553649 BMP1P13497 986 aa8.46□□□□□ -1.06
SMARCE1P3-201ENST00000553649 CD46P15529 392 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms