RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 AKAP4Q5JQC9 854 aa19.42■□□□□ 0.7
NEDD1-205ENST00000553609 JMYQ8N9B5 988 aa19.42■□□□□ 0.7
NEDD1-205ENST00000553609 KLRG1Q96E93 195 aa19.42■□□□□ 0.7
NEDD1-205ENST00000553609 KDM2BQ8NHM5 1336 aa19.42■□□□□ 0.7
NEDD1-205ENST00000553609 PRELPP51888 382 aa19.41■□□□□ 0.7
NEDD1-205ENST00000553609 NFIXQ14938 502 aa19.41■□□□□ 0.7
NEDD1-205ENST00000553609 BCL2L12Q9HB09 334 aa19.41■□□□□ 0.7
NEDD1-205ENST00000553609 AFDNP55196 1824 aaKnown RBP19.41■□□□□ 0.7
NEDD1-205ENST00000553609 RASSF7Q02833 373 aa19.4■□□□□ 0.7
NEDD1-205ENST00000553609 SLC39A6Q13433 755 aa19.4■□□□□ 0.7
NEDD1-205ENST00000553609 RRAGCQ9HB90 399 aa19.4■□□□□ 0.7
NEDD1-205ENST00000553609 ZBTB1Q9Y2K1 713 aa19.4■□□□□ 0.7
NEDD1-205ENST00000553609 COL15A1P39059 1388 aa19.4■□□□□ 0.7
NEDD1-205ENST00000553609 DLEC1Q9Y238 1755 aa19.39■□□□□ 0.7
NEDD1-205ENST00000553609 RNMTO43148 476 aaKnown RBP19.39■□□□□ 0.69
NEDD1-205ENST00000553609 ZPR1O75312 459 aa19.39■□□□□ 0.69
NEDD1-205ENST00000553609 AMER1Q5JTC6 1135 aaPredicted RBP19.39■□□□□ 0.69
NEDD1-205ENST00000553609 C16orf71Q8IYS4 520 aaPredicted RBP19.39■□□□□ 0.69
NEDD1-205ENST00000553609 NARFQ9UHQ1 456 aa19.39■□□□□ 0.69
NEDD1-205ENST00000553609 ZC3H4Q9UPT8 1303 aaKnown RBP19.38■□□□□ 0.69
NEDD1-205ENST00000553609 CARMIL3Q8ND23 1372 aa19.37■□□□□ 0.69
NEDD1-205ENST00000553609 UBR2Q8IWV8 1755 aa19.37■□□□□ 0.69
NEDD1-205ENST00000553609 KNSTRNQ9Y448 316 aa19.36■□□□□ 0.69
NEDD1-205ENST00000553609 VIRMAQ69YN4 1812 aaKnown RBP19.35■□□□□ 0.69
NEDD1-205ENST00000553609 SERPINB2P05120 415 aa19.34■□□□□ 0.69
NEDD1-205ENST00000553609 HMOX1P09601 288 aa19.34■□□□□ 0.69
NEDD1-205ENST00000553609 LMNB1P20700 586 aa19.34■□□□□ 0.69
NEDD1-205ENST00000553609 MTHFSDQ2M296 383 aaKnown RBP19.34■□□□□ 0.69
NEDD1-205ENST00000553609 COL13A1Q5TAT6 717 aaPredicted RBP19.34■□□□□ 0.69
NEDD1-205ENST00000553609 VSIG10Q8N0Z9 540 aa19.34■□□□□ 0.69
NEDD1-205ENST00000553609 SMC1BQ8NDV3 1235 aa19.34■□□□□ 0.69
NEDD1-205ENST00000553609 NFKBIEO00221 500 aa19.33■□□□□ 0.68
NEDD1-205ENST00000553609 TIAM2Q8IVF5 1701 aa19.33■□□□□ 0.68
NEDD1-205ENST00000553609 GLTPD2A6NH11 291 aa19.32■□□□□ 0.68
NEDD1-205ENST00000553609 TTLL6Q8N841 843 aa19.32■□□□□ 0.68
NEDD1-205ENST00000553609 PCGF6Q9BYE7 350 aa19.32■□□□□ 0.68
NEDD1-205ENST00000553609 EIF5P55010 431 aaKnown RBP19.31■□□□□ 0.68
NEDD1-205ENST00000553609 C2CD5Q86YS7 1000 aa19.3■□□□□ 0.68
NEDD1-205ENST00000553609 ANKRD31Q8N7Z5 1873 aa19.3■□□□□ 0.68
NEDD1-205ENST00000553609 SCN7AQ01118 1682 aa19.3■□□□□ 0.68
NEDD1-205ENST00000553609 COL3A1P02461 1466 aaPredicted RBP19.29■□□□□ 0.68
NEDD1-205ENST00000553609 VEGFAP15692 232 aaPredicted RBP19.29■□□□□ 0.68
NEDD1-205ENST00000553609 CANXP27824 592 aaKnown RBP19.29■□□□□ 0.68
NEDD1-205ENST00000553609 COL11A2P13942 1736 aaPredicted RBP19.28■□□□□ 0.68
NEDD1-205ENST00000553609 KIF7Q2M1P5 1343 aa19.28■□□□□ 0.68
NEDD1-205ENST00000553609 POTECB2RU33 542 aa19.28■□□□□ 0.68
NEDD1-205ENST00000553609 PER1O15534 1290 aaPredicted RBP19.27■□□□□ 0.68
NEDD1-205ENST00000553609 H0YIN7 160 aa19.26■□□□□ 0.67
NEDD1-205ENST00000553609 DIAPH1O60610 1272 aaKnown RBP19.26■□□□□ 0.67
NEDD1-205ENST00000553609 TBC1D9BQ66K14 1250 aa19.26■□□□□ 0.67
NEDD1-205ENST00000553609 BICDL1Q6ZP65 573 aa19.26■□□□□ 0.67
NEDD1-205ENST00000553609 ZNF496Q96IT1 587 aaPredicted RBP19.26■□□□□ 0.67
NEDD1-205ENST00000553609 SIPA1L3O60292 1781 aaPredicted RBP19.26■□□□□ 0.67
NEDD1-205ENST00000553609 CCDC88AQ3V6T2 1871 aa19.25■□□□□ 0.67
NEDD1-205ENST00000553609 HEG1Q9ULI3 1381 aa19.25■□□□□ 0.67
NEDD1-205ENST00000553609 STARD3NLO95772 234 aa19.24■□□□□ 0.67
NEDD1-205ENST00000553609 PRR5LQ6MZQ0 368 aa19.24■□□□□ 0.67
NEDD1-205ENST00000553609 IL17REQ8NFR9 667 aa19.24■□□□□ 0.67
NEDD1-205ENST00000553609 FER1L6Q2WGJ9 1857 aa19.24■□□□□ 0.67
NEDD1-205ENST00000553609 A0A087WZG4 1122 aa19.23■□□□□ 0.67
NEDD1-205ENST00000553609 ZNF790Q6PG37 636 aa19.23■□□□□ 0.67
NEDD1-205ENST00000553609 TTC5Q8N0Z6 440 aa19.23■□□□□ 0.67
NEDD1-205ENST00000553609 BRIP1Q9BX63 1249 aa19.23■□□□□ 0.67
NEDD1-205ENST00000553609 CCDC24Q8N4L8 307 aa19.22■□□□□ 0.67
NEDD1-205ENST00000553609 C21orf2O43822 256 aa19.21■□□□□ 0.67
NEDD1-205ENST00000553609 IL6STP40189 918 aaPredicted RBP19.21■□□□□ 0.67
NEDD1-205ENST00000553609 PDZRN3Q9UPQ7 1066 aa19.21■□□□□ 0.67
NEDD1-205ENST00000553609 TBC1D2BQ9UPU7 963 aa19.21■□□□□ 0.67
NEDD1-205ENST00000553609 LTBP3Q9NS15 1303 aa19.21■□□□□ 0.67
NEDD1-205ENST00000553609 CEMIPQ8WUJ3 1361 aa19.2■□□□□ 0.66
NEDD1-205ENST00000553609 DICER1Q9UPY3 1922 aaKnown RBP19.2■□□□□ 0.66
NEDD1-205ENST00000553609 CAMTA2O94983 1202 aa19.2■□□□□ 0.66
NEDD1-205ENST00000553609 HSPA1AP0DMV8 641 aaKnown RBP19.2■□□□□ 0.66
NEDD1-205ENST00000553609 HSPA1BP0DMV9 641 aaKnown RBP19.2■□□□□ 0.66
NEDD1-205ENST00000553609 PDE6BP35913 854 aa19.2■□□□□ 0.66
NEDD1-205ENST00000553609 CC2D1BQ5T0F9 858 aaKnown RBP19.2■□□□□ 0.66
NEDD1-205ENST00000553609 TNS4Q8IZW8 715 aa19.2■□□□□ 0.66
NEDD1-205ENST00000553609 ZNF622Q969S3 477 aaKnown RBP eCLIP19.2■□□□□ 0.66
NEDD1-205ENST00000553609 TEX13AQ9BXU3 409 aaPredicted RBP19.19■□□□□ 0.66
NEDD1-205ENST00000553609 BCORQ6W2J9 1755 aa19.19■□□□□ 0.66
NEDD1-205ENST00000553609 NPC1L1Q9UHC9 1359 aa19.19■□□□□ 0.66
NEDD1-205ENST00000553609 GNAT3A8MTJ3 354 aa19.18■□□□□ 0.66
NEDD1-205ENST00000553609 A1BGP04217 495 aa19.18■□□□□ 0.66
NEDD1-205ENST00000553609 TEFQ10587 303 aa19.18■□□□□ 0.66
NEDD1-205ENST00000553609 ERFEQ4G0M1 354 aa19.18■□□□□ 0.66
NEDD1-205ENST00000553609 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
NEDD1-205ENST00000553609 SLX4Q8IY92 1834 aa19.18■□□□□ 0.66
NEDD1-205ENST00000553609 DPY19L2Q6NUT2 758 aa19.17■□□□□ 0.66
NEDD1-205ENST00000553609 GAS2L2Q8NHY3 880 aa19.17■□□□□ 0.66
NEDD1-205ENST00000553609 ARFGEF2Q9Y6D5 1785 aa19.16■□□□□ 0.66
NEDD1-205ENST00000553609 KCNQ3O43525 872 aa19.16■□□□□ 0.66
NEDD1-205ENST00000553609 CAPN15O75808 1086 aa19.16■□□□□ 0.66
NEDD1-205ENST00000553609 POTEIP0CG38 1075 aa19.16■□□□□ 0.66
NEDD1-205ENST00000553609 POTEJP0CG39 1038 aa19.16■□□□□ 0.66
NEDD1-205ENST00000553609 SRGNP10124 158 aa19.16■□□□□ 0.66
NEDD1-205ENST00000553609 CNBD1Q8NA66 436 aa19.16■□□□□ 0.66
NEDD1-205ENST00000553609 FMNL2Q96PY5 1086 aa19.16■□□□□ 0.66
NEDD1-205ENST00000553609 TAOK3Q9H2K8 898 aa19.16■□□□□ 0.66
NEDD1-205ENST00000553609 ZNF330Q9Y3S2 320 aaPredicted RBP19.16■□□□□ 0.66
NEDD1-205ENST00000553609 STYK1Q6J9G0 422 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms