RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 IL17REQ8NFR9 667 aa20.23■□□□□ 0.83
SDR39U1-205ENST00000553546 COL15A1P39059 1388 aa20.22■□□□□ 0.83
SDR39U1-205ENST00000553546 STARD3NLO95772 234 aa20.22■□□□□ 0.83
SDR39U1-205ENST00000553546 U2AF1L5P0DN76 240 aaPredicted RBP20.22■□□□□ 0.83
SDR39U1-205ENST00000553546 U2AF1Q01081 240 aaKnown RBP eCLIP20.22■□□□□ 0.83
SDR39U1-205ENST00000553546 FKBP8Q14318 412 aa20.22■□□□□ 0.83
SDR39U1-205ENST00000553546 CEMIPQ8WUJ3 1361 aa20.21■□□□□ 0.83
SDR39U1-205ENST00000553546 FCHSD2O94868 740 aa20.21■□□□□ 0.83
SDR39U1-205ENST00000553546 APLP1P51693 650 aa20.21■□□□□ 0.83
SDR39U1-205ENST00000553546 ZNF790Q6PG37 636 aa20.21■□□□□ 0.83
SDR39U1-205ENST00000553546 DNAJC5GQ8N7S2 189 aa20.21■□□□□ 0.83
SDR39U1-205ENST00000553546 TEX13AQ9BXU3 409 aaPredicted RBP20.21■□□□□ 0.83
SDR39U1-205ENST00000553546 ZBTB1Q9Y2K1 713 aa20.21■□□□□ 0.83
SDR39U1-205ENST00000553546 PHACTR3Q96KR7 559 aa20.2■□□□□ 0.82
SDR39U1-205ENST00000553546 NARFQ9UHQ1 456 aa20.2■□□□□ 0.82
SDR39U1-205ENST00000553546 HEG1Q9ULI3 1381 aa20.2■□□□□ 0.82
SDR39U1-205ENST00000553546 A0A0G2JLW4 131 aa20.19■□□□□ 0.82
SDR39U1-205ENST00000553546 USPL1Q5W0Q7 1092 aa20.19■□□□□ 0.82
SDR39U1-205ENST00000553546 BRCA1P38398 1863 aaKnown RBP20.19■□□□□ 0.82
SDR39U1-205ENST00000553546 DPEP1P16444 411 aa20.18■□□□□ 0.82
SDR39U1-205ENST00000553546 DDR1Q08345 913 aa20.18■□□□□ 0.82
SDR39U1-205ENST00000553546 RTF1Q92541 710 aaKnown RBP20.18■□□□□ 0.82
SDR39U1-205ENST00000553546 ZNF496Q96IT1 587 aaPredicted RBP20.18■□□□□ 0.82
SDR39U1-205ENST00000553546 FMNL2Q96PY5 1086 aa20.18■□□□□ 0.82
SDR39U1-205ENST00000553546 BCS1LQ9Y276 419 aa20.18■□□□□ 0.82
SDR39U1-205ENST00000553546 A0A087WZG4 1122 aa20.17■□□□□ 0.82
SDR39U1-205ENST00000553546 POLRMTO00411 1230 aaKnown RBP20.17■□□□□ 0.82
SDR39U1-205ENST00000553546 TM4SF1P30408 202 aa20.17■□□□□ 0.82
SDR39U1-205ENST00000553546 CANXP27824 592 aaKnown RBP20.16■□□□□ 0.82
SDR39U1-205ENST00000553546 BTBD11A6QL63 1104 aa20.15■□□□□ 0.82
SDR39U1-205ENST00000553546 NEFMP07197 916 aa20.15■□□□□ 0.82
SDR39U1-205ENST00000553546 ARFGEF1Q9Y6D6 1849 aa20.15■□□□□ 0.82
SDR39U1-205ENST00000553546 HTATSF1O43719 755 aaKnown RBP20.14■□□□□ 0.81
SDR39U1-205ENST00000553546 EIF5P55010 431 aaKnown RBP20.14■□□□□ 0.81
SDR39U1-205ENST00000553546 PIM2Q9P1W9 311 aa20.14■□□□□ 0.81
SDR39U1-205ENST00000553546 NRXN2Q9P2S2 1712 aa20.13■□□□□ 0.81
SDR39U1-205ENST00000553546 TOMM70O94826 608 aa20.13■□□□□ 0.81
SDR39U1-205ENST00000553546 NFIXQ14938 502 aa20.13■□□□□ 0.81
SDR39U1-205ENST00000553546 NPM2Q86SE8 214 aaKnown RBP20.13■□□□□ 0.81
SDR39U1-205ENST00000553546 AFDNP55196 1824 aaKnown RBP20.13■□□□□ 0.81
SDR39U1-205ENST00000553546 KCNA3P22001 575 aa20.12■□□□□ 0.81
SDR39U1-205ENST00000553546 IL6STP40189 918 aaPredicted RBP20.12■□□□□ 0.81
SDR39U1-205ENST00000553546 COL13A1Q5TAT6 717 aaPredicted RBP20.12■□□□□ 0.81
SDR39U1-205ENST00000553546 SCN7AQ01118 1682 aa20.12■□□□□ 0.81
SDR39U1-205ENST00000553546 DALRD3Q5D0E6 543 aaKnown RBP20.11■□□□□ 0.81
SDR39U1-205ENST00000553546 BCL2L12Q9HB09 334 aa20.11■□□□□ 0.81
SDR39U1-205ENST00000553546 ARHGAP27Q6ZUM4 889 aa20.1■□□□□ 0.81
SDR39U1-205ENST00000553546 MCM10Q7L590 875 aa20.1■□□□□ 0.81
SDR39U1-205ENST00000553546 NMRK2Q9NPI5 230 aa20.1■□□□□ 0.81
SDR39U1-205ENST00000553546 SERPINB2P05120 415 aa20.09■□□□□ 0.81
SDR39U1-205ENST00000553546 HTRA3P83110 453 aa20.09■□□□□ 0.81
SDR39U1-205ENST00000553546 ZNF330Q9Y3S2 320 aaPredicted RBP20.09■□□□□ 0.81
SDR39U1-205ENST00000553546 PCNTO95613 3336 aa20.09■□□□□ 0.81
SDR39U1-205ENST00000553546 KCNQ3O43525 872 aa20.08■□□□□ 0.81
SDR39U1-205ENST00000553546 CAPN15O75808 1086 aa20.08■□□□□ 0.81
SDR39U1-205ENST00000553546 PNNQ9H307 717 aaKnown RBP20.08■□□□□ 0.81
SDR39U1-205ENST00000553546 SNRPA1P09661 255 aaKnown RBP20.07■□□□□ 0.8
SDR39U1-205ENST00000553546 CHRNA5P30532 468 aa20.07■□□□□ 0.8
SDR39U1-205ENST00000553546 DLEC1Q9Y238 1755 aa20.06■□□□□ 0.8
SDR39U1-205ENST00000553546 A1BGP04217 495 aa20.06■□□□□ 0.8
SDR39U1-205ENST00000553546 KLRG1Q96E93 195 aa20.06■□□□□ 0.8
SDR39U1-205ENST00000553546 CARMIL3Q8ND23 1372 aa20.06■□□□□ 0.8
SDR39U1-205ENST00000553546 DLG5Q8TDM6 1919 aa20.06■□□□□ 0.8
SDR39U1-205ENST00000553546 DCTN1Q14203 1278 aa20.05■□□□□ 0.8
SDR39U1-205ENST00000553546 RALBP1Q15311 655 aa20.05■□□□□ 0.8
SDR39U1-205ENST00000553546 TAF7Q15545 349 aaPredicted RBP20.05■□□□□ 0.8
SDR39U1-205ENST00000553546 BICDL1Q6ZP65 573 aa20.05■□□□□ 0.8
SDR39U1-205ENST00000553546 JMYQ8N9B5 988 aa20.05■□□□□ 0.8
SDR39U1-205ENST00000553546 TBC1D2BQ9UPU7 963 aa20.05■□□□□ 0.8
SDR39U1-205ENST00000553546 BCORQ6W2J9 1755 aa20.05■□□□□ 0.8
SDR39U1-205ENST00000553546 TBC1D9BQ66K14 1250 aa20.04■□□□□ 0.8
SDR39U1-205ENST00000553546 PNISRQ8TF01 805 aaKnown RBP20.04■□□□□ 0.8
SDR39U1-205ENST00000553546 PDZRN3Q9UPQ7 1066 aa20.04■□□□□ 0.8
SDR39U1-205ENST00000553546 USP16Q9Y5T5 823 aa20.04■□□□□ 0.8
SDR39U1-205ENST00000553546 MAPK8IP3Q9UPT6 1336 aa20.03■□□□□ 0.8
SDR39U1-205ENST00000553546 DZIP3Q86Y13 1208 aaKnown RBP20.03■□□□□ 0.8
SDR39U1-205ENST00000553546 CAMTA2O94983 1202 aa20.02■□□□□ 0.8
SDR39U1-205ENST00000553546 NFE2L2Q16236 605 aa20.02■□□□□ 0.8
SDR39U1-205ENST00000553546 RBM46Q8TBY0 533 aaKnown RBP20.02■□□□□ 0.8
SDR39U1-205ENST00000553546 PLEKHF1Q96S99 279 aa20.02■□□□□ 0.8
SDR39U1-205ENST00000553546 LAMB4A4D0S4 1761 aa20.02■□□□□ 0.8
SDR39U1-205ENST00000553546 H0YIN7 160 aa20.01■□□□□ 0.79
SDR39U1-205ENST00000553546 C9orf131Q5VYM1 1079 aa20.01■□□□□ 0.79
SDR39U1-205ENST00000553546 C2CD5Q86YS7 1000 aa20.01■□□□□ 0.79
SDR39U1-205ENST00000553546 SETDB2Q96T68 719 aa20.01■□□□□ 0.79
SDR39U1-205ENST00000553546 TNRC6CQ9HCJ0 1690 aaKnown RBP20■□□□□ 0.79
SDR39U1-205ENST00000553546 PDE6BP35913 854 aa20■□□□□ 0.79
SDR39U1-205ENST00000553546 TTLL6Q8N841 843 aa20■□□□□ 0.79
SDR39U1-205ENST00000553546 BRIP1Q9BX63 1249 aa20■□□□□ 0.79
SDR39U1-205ENST00000553546 ZNF652Q9Y2D9 606 aa20■□□□□ 0.79
SDR39U1-205ENST00000553546 KDM3BQ7LBC6 1761 aa20■□□□□ 0.79
SDR39U1-205ENST00000553546 ANKRD31Q8N7Z5 1873 aa19.99■□□□□ 0.79
SDR39U1-205ENST00000553546 PRAMEF22A3QJZ6 481 aa19.99■□□□□ 0.79
SDR39U1-205ENST00000553546 RGL2O15211 777 aa19.99■□□□□ 0.79
SDR39U1-205ENST00000553546 NPHP1O15259 732 aa19.99■□□□□ 0.79
SDR39U1-205ENST00000553546 CLEC4GQ6UXB4 293 aa19.99■□□□□ 0.79
SDR39U1-205ENST00000553546 TNS4Q8IZW8 715 aa19.99■□□□□ 0.79
SDR39U1-205ENST00000553546 PRELPP51888 382 aa19.98■□□□□ 0.79
SDR39U1-205ENST00000553546 PRR5LQ6MZQ0 368 aa19.98■□□□□ 0.79
SDR39U1-205ENST00000553546 CNBD1Q8NA66 436 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms