RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 ATF3P18847 181 aa9.35□□□□□ -0.91
ATXN3-221ENST00000553498 HOXC9P31274 260 aa9.35□□□□□ -0.91
ATXN3-221ENST00000553498 EXOSC9Q06265 439 aaKnown RBP9.35□□□□□ -0.91
ATXN3-221ENST00000553498 C20orf194Q5TEA3 1177 aa9.35□□□□□ -0.91
ATXN3-221ENST00000553498 ARHGAP45Q92619 1136 aa9.35□□□□□ -0.91
ATXN3-221ENST00000553498 RNF166Q96A37 237 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-221ENST00000553498 NPDC1Q9NQX5 325 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-221ENST00000553498 BABAM1Q9NWV8 329 aa9.35□□□□□ -0.91
ATXN3-221ENST00000553498 C1orf167Q5SNV9 1468 aa9.34□□□□□ -0.91
ATXN3-221ENST00000553498 SOS1Q07889 1333 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-221ENST00000553498 KDM2BQ8NHM5 1336 aa9.34□□□□□ -0.91
ATXN3-221ENST00000553498 ONECUT3O60422 494 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-221ENST00000553498 IP6K1Q92551 441 aa9.34□□□□□ -0.91
ATXN3-221ENST00000553498 CLUAP1Q96AJ1 413 aa9.34□□□□□ -0.91
ATXN3-221ENST00000553498 SMC4Q9NTJ3 1288 aa9.34□□□□□ -0.91
ATXN3-221ENST00000553498 PLEKHG2Q9H7P9 1386 aa9.34□□□□□ -0.91
ATXN3-221ENST00000553498 ATF7IPQ6VMQ6 1270 aa9.33□□□□□ -0.92
ATXN3-221ENST00000553498 DZIP1LQ8IYY4 767 aaKnown RBP9.33□□□□□ -0.92
ATXN3-221ENST00000553498 TSR2Q969E8 191 aaKnown RBP9.33□□□□□ -0.92
ATXN3-221ENST00000553498 CHMP4AQ9BY43 222 aa9.33□□□□□ -0.92
ATXN3-221ENST00000553498 RABGEF1Q9UJ41 708 aa9.33□□□□□ -0.92
ATXN3-221ENST00000553498 DDX19BQ9UMR2 479 aa9.33□□□□□ -0.92
ATXN3-221ENST00000553498 TMEM94Q12767 1356 aa9.33□□□□□ -0.92
ATXN3-221ENST00000553498 KIAA0232Q92628 1395 aa9.33□□□□□ -0.92
ATXN3-221ENST00000553498 PIK3C2AO00443 1686 aa9.32□□□□□ -0.92
ATXN3-221ENST00000553498 USP19O94966 1318 aa9.32□□□□□ -0.92
ATXN3-221ENST00000553498 TRIM6-TRIM34B2RNG4 842 aa9.32□□□□□ -0.92
ATXN3-221ENST00000553498 FTSJ3Q8IY81 847 aaKnown RBP9.32□□□□□ -0.92
ATXN3-221ENST00000553498 RTF1Q92541 710 aaKnown RBP9.32□□□□□ -0.92
ATXN3-221ENST00000553498 FRAT1Q92837 279 aaPredicted RBP9.32□□□□□ -0.92
ATXN3-221ENST00000553498 EYA1Q99502 592 aa9.32□□□□□ -0.92
ATXN3-221ENST00000553498 TSKSQ9UJT2 592 aa9.32□□□□□ -0.92
ATXN3-221ENST00000553498 RBM19Q9Y4C8 960 aaKnown RBP9.32□□□□□ -0.92
ATXN3-221ENST00000553498 KIF1AQ12756 1690 aa9.32□□□□□ -0.92
ATXN3-221ENST00000553498 NPHP3Q7Z494 1330 aa9.31□□□□□ -0.92
ATXN3-221ENST00000553498 CHL1O00533 1208 aa9.31□□□□□ -0.92
ATXN3-221ENST00000553498 MVPQ14764 893 aaKnown RBP9.31□□□□□ -0.92
ATXN3-221ENST00000553498 SSH1Q8WYL5 1049 aa9.31□□□□□ -0.92
ATXN3-221ENST00000553498 FAM198AQ9UFP1 575 aa9.31□□□□□ -0.92
ATXN3-221ENST00000553498 MSH6P52701 1360 aa9.31□□□□□ -0.92
ATXN3-221ENST00000553498 RGPD1P0DJD0 1748 aa9.31□□□□□ -0.92
ATXN3-221ENST00000553498 SLIT3O75094 1523 aa9.31□□□□□ -0.92
ATXN3-221ENST00000553498 VAMP4O75379 141 aa9.3□□□□□ -0.92
ATXN3-221ENST00000553498 GCP02774 474 aa9.3□□□□□ -0.92
ATXN3-221ENST00000553498 KRT28Q7Z3Y7 464 aa9.3□□□□□ -0.92
ATXN3-221ENST00000553498 ARHGEF25Q86VW2 580 aa9.3□□□□□ -0.92
ATXN3-221ENST00000553498 AEBP1Q8IUX7 1158 aa9.3□□□□□ -0.92
ATXN3-221ENST00000553498 CERKQ8TCT0 537 aa9.3□□□□□ -0.92
ATXN3-221ENST00000553498 ORAI2Q96SN7 254 aa9.3□□□□□ -0.92
ATXN3-221ENST00000553498 MBIPQ9NS73 344 aa9.3□□□□□ -0.92
ATXN3-221ENST00000553498 KIAA1468Q9P260 1216 aa9.3□□□□□ -0.92
ATXN3-221ENST00000553498 NFAT5O94916 1531 aa9.3□□□□□ -0.92
ATXN3-221ENST00000553498 PEAK1Q9H792 1746 aa9.29□□□□□ -0.92
ATXN3-221ENST00000553498 FOXO3O43524 673 aa9.29□□□□□ -0.92
ATXN3-221ENST00000553498 PRSS12P56730 875 aa9.29□□□□□ -0.92
ATXN3-221ENST00000553498 TWISTNBQ3B726 338 aaPredicted RBP9.29□□□□□ -0.92
ATXN3-221ENST00000553498 AMOTQ4VCS5 1084 aa9.29□□□□□ -0.92
ATXN3-221ENST00000553498 PANK1Q8TE04 598 aa9.29□□□□□ -0.92
ATXN3-221ENST00000553498 API5Q9BZZ5 524 aaKnown RBP9.29□□□□□ -0.92
ATXN3-221ENST00000553498 RWDD1Q9H446 243 aaPredicted RBP9.29□□□□□ -0.92
ATXN3-221ENST00000553498 COG6Q9Y2V7 657 aa9.29□□□□□ -0.92
ATXN3-221ENST00000553498 PHRF1Q9P1Y6 1649 aaKnown RBP9.29□□□□□ -0.92
ATXN3-221ENST00000553498 GNAT3A8MTJ3 354 aa9.28□□□□□ -0.92
ATXN3-221ENST00000553498 C3orf80F5H4A9 247 aa9.28□□□□□ -0.92
ATXN3-221ENST00000553498 TRIM27P14373 513 aa9.28□□□□□ -0.92
ATXN3-221ENST00000553498 MTHFSDQ2M296 383 aaKnown RBP9.28□□□□□ -0.92
ATXN3-221ENST00000553498 TTC13Q8NBP0 860 aa9.28□□□□□ -0.92
ATXN3-221ENST00000553498 NOB1Q9ULX3 412 aaKnown RBP9.28□□□□□ -0.92
ATXN3-221ENST00000553498 LAS1LQ9Y4W2 734 aaKnown RBP9.28□□□□□ -0.92
ATXN3-221ENST00000553498 CRB1P82279 1406 aa9.28□□□□□ -0.92
ATXN3-221ENST00000553498 NCAPD2Q15021 1401 aa9.28□□□□□ -0.92
ATXN3-221ENST00000553498 LMTK3Q96Q04 1460 aa9.28□□□□□ -0.92
ATXN3-221ENST00000553498 ABCC6O95255 1503 aa9.27□□□□□ -0.93
ATXN3-221ENST00000553498 HDAC1Q13547 482 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-221ENST00000553498 MRPL50Q8N5N7 158 aaKnown RBP9.27□□□□□ -0.93
ATXN3-221ENST00000553498 PTPRCP08575 1304 aa9.27□□□□□ -0.93
ATXN3-221ENST00000553498 MAP2P11137 1827 aaKnown RBP9.26□□□□□ -0.93
ATXN3-221ENST00000553498 MAP3K5Q99683 1374 aa9.26□□□□□ -0.93
ATXN3-221ENST00000553498 OVOS2A0A0G2JMS6 1433 aa9.26□□□□□ -0.93
ATXN3-221ENST00000553498 PTGDRQ13258 359 aa9.26□□□□□ -0.93
ATXN3-221ENST00000553498 RBM26Q5T8P6 1007 aaKnown RBP9.26□□□□□ -0.93
ATXN3-221ENST00000553498 NUTM2GQ5VZR2 741 aa9.26□□□□□ -0.93
ATXN3-221ENST00000553498 BCL2L13Q9BXK5 485 aa9.26□□□□□ -0.93
ATXN3-221ENST00000553498 NBPF3Q9H094 633 aa9.26□□□□□ -0.93
ATXN3-221ENST00000553498 RBM27Q9P2N5 1060 aaKnown RBP9.26□□□□□ -0.93
ATXN3-221ENST00000553498 RLBP1P12271 317 aa9.25□□□□□ -0.93
ATXN3-221ENST00000553498 PLEKHO1Q53GL0 409 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-221ENST00000553498 THUMPD2Q9BTF0 503 aaKnown RBP9.25□□□□□ -0.93
ATXN3-221ENST00000553498 ABCC4O15439 1325 aa9.25□□□□□ -0.93
ATXN3-221ENST00000553498 TNS3Q68CZ2 1445 aa9.24□□□□□ -0.93
ATXN3-221ENST00000553498 FAM83GA6ND36 823 aa9.24□□□□□ -0.93
ATXN3-221ENST00000553498 HOXB7P09629 217 aa9.24□□□□□ -0.93
ATXN3-221ENST00000553498 TAF7Q15545 349 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-221ENST00000553498 AKAP4Q5JQC9 854 aa9.24□□□□□ -0.93
ATXN3-221ENST00000553498 LAPTM4BQ86VI4 370 aa9.24□□□□□ -0.93
ATXN3-221ENST00000553498 ITPRIPQ8IWB1 547 aa9.24□□□□□ -0.93
ATXN3-221ENST00000553498 C8orf58Q8NAV2 365 aa9.24□□□□□ -0.93
ATXN3-221ENST00000553498 ZBTB40Q9NUA8 1239 aa9.24□□□□□ -0.93
ATXN3-221ENST00000553498 TSPYL4Q9UJ04 414 aa9.24□□□□□ -0.93
ATXN3-221ENST00000553498 CPDO75976 1380 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms