RNA–Protein interactions for RNA: ENST00000553497.1

SUSD6-202, Transcript of sushi domain containing 6, humanhuman

TSL 3

Gene SUSD6, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD6-202ENST00000553497 ZPR1O75312 459 aa24.07■■□□□ 1.44
SUSD6-202ENST00000553497 C16orf71Q8IYS4 520 aaPredicted RBP24.07■■□□□ 1.44
SUSD6-202ENST00000553497 KNSTRNQ9Y448 316 aa24.07■■□□□ 1.44
SUSD6-202ENST00000553497 KDM2BQ8NHM5 1336 aa24.07■■□□□ 1.44
SUSD6-202ENST00000553497 CCDC88AQ3V6T2 1871 aa24.07■■□□□ 1.44
SUSD6-202ENST00000553497 CYP19A1P11511 503 aaPredicted RBP24.06■■□□□ 1.44
SUSD6-202ENST00000553497 PCNTO95613 3336 aa24.05■■□□□ 1.44
SUSD6-202ENST00000553497 HTRA3P83110 453 aa24.05■■□□□ 1.44
SUSD6-202ENST00000553497 SLC39A6Q13433 755 aa24.05■■□□□ 1.44
SUSD6-202ENST00000553497 COL15A1P39059 1388 aa24.04■■□□□ 1.44
SUSD6-202ENST00000553497 RNMTO43148 476 aaKnown RBP24.04■■□□□ 1.44
SUSD6-202ENST00000553497 FSTL1Q12841 308 aa24.04■■□□□ 1.44
SUSD6-202ENST00000553497 RRAGCQ9HB90 399 aa24.04■■□□□ 1.44
SUSD6-202ENST00000553497 NFIXQ14938 502 aa24.03■■□□□ 1.44
SUSD6-202ENST00000553497 AMER1Q5JTC6 1135 aaPredicted RBP24.03■■□□□ 1.44
SUSD6-202ENST00000553497 NARFQ9UHQ1 456 aa24.03■■□□□ 1.44
SUSD6-202ENST00000553497 ZBTB1Q9Y2K1 713 aa24.03■■□□□ 1.44
SUSD6-202ENST00000553497 TIAM2Q8IVF5 1701 aa24.03■■□□□ 1.44
SUSD6-202ENST00000553497 HMOX1P09601 288 aa24.02■■□□□ 1.44
SUSD6-202ENST00000553497 RASSF7Q02833 373 aa24.02■■□□□ 1.44
SUSD6-202ENST00000553497 BCL2L12Q9HB09 334 aa24.01■■□□□ 1.43
SUSD6-202ENST00000553497 KLRG1Q96E93 195 aa24■■□□□ 1.43
SUSD6-202ENST00000553497 ANKRD31Q8N7Z5 1873 aa23.99■■□□□ 1.43
SUSD6-202ENST00000553497 MTHFSDQ2M296 383 aaKnown RBP23.99■■□□□ 1.43
SUSD6-202ENST00000553497 SERPINB2P05120 415 aa23.98■■□□□ 1.43
SUSD6-202ENST00000553497 PRELPP51888 382 aa23.98■■□□□ 1.43
SUSD6-202ENST00000553497 SIPA1L3O60292 1781 aaPredicted RBP23.97■■□□□ 1.43
SUSD6-202ENST00000553497 VSIG10Q8N0Z9 540 aa23.97■■□□□ 1.43
SUSD6-202ENST00000553497 JMYQ8N9B5 988 aa23.97■■□□□ 1.43
SUSD6-202ENST00000553497 CARMIL3Q8ND23 1372 aa23.97■■□□□ 1.43
SUSD6-202ENST00000553497 ZC3H4Q9UPT8 1303 aaKnown RBP23.97■■□□□ 1.43
SUSD6-202ENST00000553497 SCN7AQ01118 1682 aa23.96■■□□□ 1.43
SUSD6-202ENST00000553497 COL11A2P13942 1736 aaPredicted RBP23.94■■□□□ 1.42
SUSD6-202ENST00000553497 LMNB1P20700 586 aa23.94■■□□□ 1.42
SUSD6-202ENST00000553497 CANXP27824 592 aaKnown RBP23.94■■□□□ 1.42
SUSD6-202ENST00000553497 TTLL6Q8N841 843 aa23.94■■□□□ 1.42
SUSD6-202ENST00000553497 SMC1BQ8NDV3 1235 aa23.94■■□□□ 1.42
SUSD6-202ENST00000553497 DICER1Q9UPY3 1922 aaKnown RBP23.94■■□□□ 1.42
SUSD6-202ENST00000553497 C2CD5Q86YS7 1000 aa23.93■■□□□ 1.42
SUSD6-202ENST00000553497 KIF7Q2M1P5 1343 aa23.92■■□□□ 1.42
SUSD6-202ENST00000553497 GLTPD2A6NH11 291 aa23.92■■□□□ 1.42
SUSD6-202ENST00000553497 DIAPH1O60610 1272 aaKnown RBP23.92■■□□□ 1.42
SUSD6-202ENST00000553497 FER1L6Q2WGJ9 1857 aa23.92■■□□□ 1.42
SUSD6-202ENST00000553497 EIF5P55010 431 aaKnown RBP23.91■■□□□ 1.42
SUSD6-202ENST00000553497 CACNA1SQ13698 1873 aa23.9■■□□□ 1.42
SUSD6-202ENST00000553497 COL3A1P02461 1466 aaPredicted RBP23.9■■□□□ 1.42
SUSD6-202ENST00000553497 H0YIN7 160 aa23.9■■□□□ 1.42
SUSD6-202ENST00000553497 NFKBIEO00221 500 aa23.9■■□□□ 1.42
SUSD6-202ENST00000553497 BICDL1Q6ZP65 573 aa23.9■■□□□ 1.42
SUSD6-202ENST00000553497 PER1O15534 1290 aaPredicted RBP23.89■■□□□ 1.41
SUSD6-202ENST00000553497 COL13A1Q5TAT6 717 aaPredicted RBP23.89■■□□□ 1.41
SUSD6-202ENST00000553497 TTC5Q8N0Z6 440 aa23.89■■□□□ 1.41
SUSD6-202ENST00000553497 STARD3NLO95772 234 aa23.88■■□□□ 1.41
SUSD6-202ENST00000553497 VEGFAP15692 232 aaPredicted RBP23.88■■□□□ 1.41
SUSD6-202ENST00000553497 TBC1D9BQ66K14 1250 aa23.88■■□□□ 1.41
SUSD6-202ENST00000553497 CC2D1BQ5T0F9 858 aaKnown RBP23.87■■□□□ 1.41
SUSD6-202ENST00000553497 ZNF496Q96IT1 587 aaPredicted RBP23.87■■□□□ 1.41
SUSD6-202ENST00000553497 HEG1Q9ULI3 1381 aa23.87■■□□□ 1.41
SUSD6-202ENST00000553497 BCORQ6W2J9 1755 aa23.86■■□□□ 1.41
SUSD6-202ENST00000553497 A0A087WZG4 1122 aa23.86■■□□□ 1.41
SUSD6-202ENST00000553497 ZNF790Q6PG37 636 aa23.85■■□□□ 1.41
SUSD6-202ENST00000553497 IL17REQ8NFR9 667 aa23.85■■□□□ 1.41
SUSD6-202ENST00000553497 ARFGEF2Q9Y6D5 1785 aa23.85■■□□□ 1.41
SUSD6-202ENST00000553497 POTECB2RU33 542 aa23.84■■□□□ 1.41
SUSD6-202ENST00000553497 SLX4Q8IY92 1834 aa23.83■■□□□ 1.41
SUSD6-202ENST00000553497 TEFQ10587 303 aa23.83■■□□□ 1.41
SUSD6-202ENST00000553497 PRR5LQ6MZQ0 368 aa23.83■■□□□ 1.41
SUSD6-202ENST00000553497 CCDC24Q8N4L8 307 aa23.83■■□□□ 1.41
SUSD6-202ENST00000553497 CCER1Q8TC90 406 aaPredicted RBP23.83■■□□□ 1.41
SUSD6-202ENST00000553497 ZNF622Q969S3 477 aaKnown RBP eCLIP23.83■■□□□ 1.41
SUSD6-202ENST00000553497 BRIP1Q9BX63 1249 aa23.83■■□□□ 1.41
SUSD6-202ENST00000553497 TBC1D2BQ9UPU7 963 aa23.83■■□□□ 1.41
SUSD6-202ENST00000553497 GNAT3A8MTJ3 354 aa23.82■■□□□ 1.4
SUSD6-202ENST00000553497 ZNF330Q9Y3S2 320 aaPredicted RBP23.82■■□□□ 1.4
SUSD6-202ENST00000553497 C21orf2O43822 256 aa23.81■■□□□ 1.4
SUSD6-202ENST00000553497 PDE6BP35913 854 aa23.81■■□□□ 1.4
SUSD6-202ENST00000553497 IL6STP40189 918 aaPredicted RBP23.81■■□□□ 1.4
SUSD6-202ENST00000553497 GAS2L2Q8NHY3 880 aa23.81■■□□□ 1.4
SUSD6-202ENST00000553497 TEX13AQ9BXU3 409 aaPredicted RBP23.81■■□□□ 1.4
SUSD6-202ENST00000553497 ZNF219Q9P2Y4 722 aaPredicted RBP23.81■■□□□ 1.4
SUSD6-202ENST00000553497 PDZRN3Q9UPQ7 1066 aa23.81■■□□□ 1.4
SUSD6-202ENST00000553497 U2SURPO15042 1029 aaKnown RBP23.8■■□□□ 1.4
SUSD6-202ENST00000553497 CEMIPQ8WUJ3 1361 aa23.78■■□□□ 1.4
SUSD6-202ENST00000553497 A1BGP04217 495 aa23.78■■□□□ 1.4
SUSD6-202ENST00000553497 DPY19L2Q6NUT2 758 aa23.78■■□□□ 1.4
SUSD6-202ENST00000553497 FMNL2Q96PY5 1086 aa23.78■■□□□ 1.4
SUSD6-202ENST00000553497 NPC1L1Q9UHC9 1359 aa23.78■■□□□ 1.4
SUSD6-202ENST00000553497 CAMTA2O94983 1202 aa23.77■■□□□ 1.4
SUSD6-202ENST00000553497 ERFEQ4G0M1 354 aa23.77■■□□□ 1.4
SUSD6-202ENST00000553497 LTBP3Q9NS15 1303 aa23.77■■□□□ 1.4
SUSD6-202ENST00000553497 KCNQ3O43525 872 aa23.76■■□□□ 1.39
SUSD6-202ENST00000553497 CNGB1Q14028 1251 aaPredicted RBP23.75■■□□□ 1.39
SUSD6-202ENST00000553497 CNBD1Q8NA66 436 aa23.75■■□□□ 1.39
SUSD6-202ENST00000553497 SETDB2Q96T68 719 aa23.75■■□□□ 1.39
SUSD6-202ENST00000553497 HSPA1AP0DMV8 641 aaKnown RBP23.74■■□□□ 1.39
SUSD6-202ENST00000553497 HSPA1BP0DMV9 641 aaKnown RBP23.74■■□□□ 1.39
SUSD6-202ENST00000553497 TNS4Q8IZW8 715 aa23.74■■□□□ 1.39
SUSD6-202ENST00000553497 TAOK3Q9H2K8 898 aa23.74■■□□□ 1.39
SUSD6-202ENST00000553497 SRGNP10124 158 aa23.73■■□□□ 1.39
SUSD6-202ENST00000553497 STYK1Q6J9G0 422 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms