RNA–Protein interactions for RNA: ENST00000553438.1

IFT43-205, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 472 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-205ENST00000553438 TRIM26Q12899 539 aaPredicted RBP13.93□□□□□ -0.18
IFT43-205ENST00000553438 AKAP4Q5JQC9 854 aa13.93□□□□□ -0.18
IFT43-205ENST00000553438 NARFQ9UHQ1 456 aa13.93□□□□□ -0.18
IFT43-205ENST00000553438 SCN11AQ9UI33 1791 aa13.93□□□□□ -0.18
IFT43-205ENST00000553438 LMNB1P20700 586 aa13.92□□□□□ -0.18
IFT43-205ENST00000553438 EIF4G2P78344 907 aaKnown RBP eCLIP13.92□□□□□ -0.18
IFT43-205ENST00000553438 SLC39A6Q13433 755 aa13.92□□□□□ -0.18
IFT43-205ENST00000553438 BCL2L12Q9HB09 334 aa13.92□□□□□ -0.18
IFT43-205ENST00000553438 LGR6Q9HBX8 967 aa13.92□□□□□ -0.18
IFT43-205ENST00000553438 ZBTB1Q9Y2K1 713 aa13.92□□□□□ -0.18
IFT43-205ENST00000553438 PCNTO95613 3336 aa13.92□□□□□ -0.18
IFT43-205ENST00000553438 GLTPD2A6NH11 291 aa13.91□□□□□ -0.18
IFT43-205ENST00000553438 SERPINB2P05120 415 aa13.91□□□□□ -0.18
IFT43-205ENST00000553438 HSPA5P11021 654 aaKnown RBP13.91□□□□□ -0.18
IFT43-205ENST00000553438 VEGFAP15692 232 aaPredicted RBP13.91□□□□□ -0.18
IFT43-205ENST00000553438 PRELPP51888 382 aa13.91□□□□□ -0.18
IFT43-205ENST00000553438 COL15A1P39059 1388 aa13.91□□□□□ -0.18
IFT43-205ENST00000553438 AFDNP55196 1824 aaKnown RBP13.9□□□□□ -0.18
IFT43-205ENST00000553438 RNMTO43148 476 aaKnown RBP13.9□□□□□ -0.18
IFT43-205ENST00000553438 C2CD5Q86YS7 1000 aa13.9□□□□□ -0.18
IFT43-205ENST00000553438 TTLL6Q8N841 843 aa13.9□□□□□ -0.18
IFT43-205ENST00000553438 MRC1P22897 1456 aa13.9□□□□□ -0.18
IFT43-205ENST00000553438 NFKBIEO00221 500 aa13.89□□□□□ -0.19
IFT43-205ENST00000553438 CAPN15O75808 1086 aa13.89□□□□□ -0.19
IFT43-205ENST00000553438 TNS4Q8IZW8 715 aa13.89□□□□□ -0.19
IFT43-205ENST00000553438 KNSTRNQ9Y448 316 aa13.89□□□□□ -0.19
IFT43-205ENST00000553438 NRXN2Q9P2S2 1712 aa13.89□□□□□ -0.19
IFT43-205ENST00000553438 CARMIL3Q8ND23 1372 aa13.88□□□□□ -0.19
IFT43-205ENST00000553438 H0YIN7 160 aa13.88□□□□□ -0.19
IFT43-205ENST00000553438 HMOX1P09601 288 aa13.88□□□□□ -0.19
IFT43-205ENST00000553438 CANXP27824 592 aaKnown RBP13.88□□□□□ -0.19
IFT43-205ENST00000553438 VSIG10Q8N0Z9 540 aa13.88□□□□□ -0.19
IFT43-205ENST00000553438 CLSPNQ9HAW4 1339 aa13.88□□□□□ -0.19
IFT43-205ENST00000553438 MTHFSDQ2M296 383 aaKnown RBP13.87□□□□□ -0.19
IFT43-205ENST00000553438 BICDL1Q6ZP65 573 aa13.87□□□□□ -0.19
IFT43-205ENST00000553438 DLEC1Q9Y238 1755 aa13.86□□□□□ -0.19
IFT43-205ENST00000553438 HSPA1AP0DMV8 641 aaKnown RBP13.86□□□□□ -0.19
IFT43-205ENST00000553438 HSPA1BP0DMV9 641 aaKnown RBP13.86□□□□□ -0.19
IFT43-205ENST00000553438 AMER1Q5JTC6 1135 aaPredicted RBP13.86□□□□□ -0.19
IFT43-205ENST00000553438 POTECB2RU33 542 aa13.85□□□□□ -0.19
IFT43-205ENST00000553438 STARD3NLO95772 234 aa13.85□□□□□ -0.19
IFT43-205ENST00000553438 EIF5P55010 431 aaKnown RBP13.85□□□□□ -0.19
IFT43-205ENST00000553438 TIAM2Q8IVF5 1701 aa13.84□□□□□ -0.19
IFT43-205ENST00000553438 A0A087WZG4 1122 aa13.84□□□□□ -0.19
IFT43-205ENST00000553438 DPY19L2Q6NUT2 758 aa13.84□□□□□ -0.19
IFT43-205ENST00000553438 ZNF622Q969S3 477 aaKnown RBP eCLIP13.84□□□□□ -0.19
IFT43-205ENST00000553438 CCDC88AQ3V6T2 1871 aa13.83□□□□□ -0.2
IFT43-205ENST00000553438 TBC1D9BQ66K14 1250 aa13.83□□□□□ -0.2
IFT43-205ENST00000553438 TTC5Q8N0Z6 440 aa13.83□□□□□ -0.2
IFT43-205ENST00000553438 BRIP1Q9BX63 1249 aa13.83□□□□□ -0.2
IFT43-205ENST00000553438 PCGF6Q9BYE7 350 aa13.83□□□□□ -0.2
IFT43-205ENST00000553438 ZNF219Q9P2Y4 722 aaPredicted RBP13.83□□□□□ -0.2
IFT43-205ENST00000553438 PDZRN3Q9UPQ7 1066 aa13.83□□□□□ -0.2
IFT43-205ENST00000553438 VIRMAQ69YN4 1812 aaKnown RBP13.83□□□□□ -0.2
IFT43-205ENST00000553438 UBR2Q8IWV8 1755 aa13.82□□□□□ -0.2
IFT43-205ENST00000553438 C21orf2O43822 256 aa13.82□□□□□ -0.2
IFT43-205ENST00000553438 DIAPH1O60610 1272 aaKnown RBP13.82□□□□□ -0.2
IFT43-205ENST00000553438 PDE6BP35913 854 aa13.82□□□□□ -0.2
IFT43-205ENST00000553438 ERFEQ4G0M1 354 aa13.82□□□□□ -0.2
IFT43-205ENST00000553438 PRR5LQ6MZQ0 368 aa13.82□□□□□ -0.2
IFT43-205ENST00000553438 CCDC24Q8N4L8 307 aa13.82□□□□□ -0.2
IFT43-205ENST00000553438 ZNF496Q96IT1 587 aaPredicted RBP13.81□□□□□ -0.2
IFT43-205ENST00000553438 TBC1D2BQ9UPU7 963 aa13.81□□□□□ -0.2
IFT43-205ENST00000553438 ZNF330Q9Y3S2 320 aaPredicted RBP13.81□□□□□ -0.2
IFT43-205ENST00000553438 ANKRD31Q8N7Z5 1873 aa13.8□□□□□ -0.2
IFT43-205ENST00000553438 TEFQ10587 303 aa13.8□□□□□ -0.2
IFT43-205ENST00000553438 TAOK3Q9H2K8 898 aa13.8□□□□□ -0.2
IFT43-205ENST00000553438 HEG1Q9ULI3 1381 aa13.8□□□□□ -0.2
IFT43-205ENST00000553438 IL6STP40189 918 aaPredicted RBP13.79□□□□□ -0.2
IFT43-205ENST00000553438 CHADLQ6NUI6 762 aa13.79□□□□□ -0.2
IFT43-205ENST00000553438 ZNF790Q6PG37 636 aa13.79□□□□□ -0.2
IFT43-205ENST00000553438 IL17REQ8NFR9 667 aa13.79□□□□□ -0.2
IFT43-205ENST00000553438 TEX13AQ9BXU3 409 aaPredicted RBP13.79□□□□□ -0.2
IFT43-205ENST00000553438 LTBP3Q9NS15 1303 aa13.79□□□□□ -0.2
IFT43-205ENST00000553438 COL11A2P13942 1736 aaPredicted RBP13.78□□□□□ -0.2
IFT43-205ENST00000553438 NPHP1O15259 732 aa13.78□□□□□ -0.2
IFT43-205ENST00000553438 DDNO94850 711 aaPredicted RBP13.78□□□□□ -0.2
IFT43-205ENST00000553438 CNBD1Q8NA66 436 aa13.78□□□□□ -0.2
IFT43-205ENST00000553438 GAS2L2Q8NHY3 880 aa13.78□□□□□ -0.2
IFT43-205ENST00000553438 CNKSR1Q969H4 720 aa13.78□□□□□ -0.2
IFT43-205ENST00000553438 SETDB2Q96T68 719 aa13.78□□□□□ -0.2
IFT43-205ENST00000553438 CREBZFQ9NS37 354 aa13.78□□□□□ -0.2
IFT43-205ENST00000553438 MKRN1Q9UHC7 482 aaKnown RBP13.78□□□□□ -0.2
IFT43-205ENST00000553438 SCN7AQ01118 1682 aa13.78□□□□□ -0.2
IFT43-205ENST00000553438 FER1L6Q2WGJ9 1857 aa13.78□□□□□ -0.2
IFT43-205ENST00000553438 DICER1Q9UPY3 1922 aaKnown RBP13.78□□□□□ -0.2
IFT43-205ENST00000553438 GNAT3A8MTJ3 354 aa13.77□□□□□ -0.21
IFT43-205ENST00000553438 CAMTA2O94983 1202 aa13.77□□□□□ -0.21
IFT43-205ENST00000553438 A1BGP04217 495 aa13.77□□□□□ -0.21
IFT43-205ENST00000553438 POTEIP0CG38 1075 aa13.77□□□□□ -0.21
IFT43-205ENST00000553438 POTEJP0CG39 1038 aa13.77□□□□□ -0.21
IFT43-205ENST00000553438 CC2D1BQ5T0F9 858 aaKnown RBP13.77□□□□□ -0.21
IFT43-205ENST00000553438 STYK1Q6J9G0 422 aa13.77□□□□□ -0.21
IFT43-205ENST00000553438 PRPF40BQ6NWY9 871 aaKnown RBP13.77□□□□□ -0.21
IFT43-205ENST00000553438 NPM2Q86SE8 214 aaKnown RBP13.77□□□□□ -0.21
IFT43-205ENST00000553438 KIF7Q2M1P5 1343 aa13.76□□□□□ -0.21
IFT43-205ENST00000553438 U2SURPO15042 1029 aaKnown RBP13.76□□□□□ -0.21
IFT43-205ENST00000553438 SRGNP10124 158 aa13.76□□□□□ -0.21
IFT43-205ENST00000553438 ST5P78524 1137 aa13.76□□□□□ -0.21
IFT43-205ENST00000553438 SOGA3Q5TF21 947 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms