RNA–Protein interactions for RNA: ENST00000553361.5

XRCC3-204, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-204ENST00000553361 ZNF496Q96IT1 587 aaPredicted RBP22.15■■□□□ 1.14
XRCC3-204ENST00000553361 RSPH6AQ9H0K4 717 aa22.15■■□□□ 1.14
XRCC3-204ENST00000553361 NARFQ9UHQ1 456 aa22.15■■□□□ 1.14
XRCC3-204ENST00000553361 POLRMTO00411 1230 aaKnown RBP22.14■■□□□ 1.13
XRCC3-204ENST00000553361 ZNF790Q6PG37 636 aa22.14■■□□□ 1.13
XRCC3-204ENST00000553361 PIM2Q9P1W9 311 aa22.14■■□□□ 1.13
XRCC3-204ENST00000553361 ADCY9O60503 1353 aa22.13■■□□□ 1.13
XRCC3-204ENST00000553361 KCPQ6ZWJ8 1503 aa22.13■■□□□ 1.13
XRCC3-204ENST00000553361 CHRNA5P30532 468 aa22.13■■□□□ 1.13
XRCC3-204ENST00000553361 TJP1Q07157 1748 aa22.13■■□□□ 1.13
XRCC3-204ENST00000553361 COL15A1P39059 1388 aa22.12■■□□□ 1.13
XRCC3-204ENST00000553361 C4AP0C0L4 1744 aa22.12■■□□□ 1.13
XRCC3-204ENST00000553361 NFIXQ14938 502 aa22.12■■□□□ 1.13
XRCC3-204ENST00000553361 DALRD3Q5D0E6 543 aaKnown RBP22.11■■□□□ 1.13
XRCC3-204ENST00000553361 BCL2L12Q9HB09 334 aa22.11■■□□□ 1.13
XRCC3-204ENST00000553361 BTBD11A6QL63 1104 aa22.1■■□□□ 1.13
XRCC3-204ENST00000553361 TEX13AQ9BXU3 409 aaPredicted RBP22.1■■□□□ 1.13
XRCC3-204ENST00000553361 ZNF330Q9Y3S2 320 aaPredicted RBP22.1■■□□□ 1.13
XRCC3-204ENST00000553361 KCNQ3O43525 872 aa22.09■■□□□ 1.13
XRCC3-204ENST00000553361 EIF5P55010 431 aaKnown RBP22.09■■□□□ 1.13
XRCC3-204ENST00000553361 BICDL1Q6ZP65 573 aa22.09■■□□□ 1.13
XRCC3-204ENST00000553361 FMNL2Q96PY5 1086 aa22.09■■□□□ 1.13
XRCC3-204ENST00000553361 HEG1Q9ULI3 1381 aa22.09■■□□□ 1.13
XRCC3-204ENST00000553361 A0A087WZG4 1122 aa22.08■■□□□ 1.13
XRCC3-204ENST00000553361 SERPINB2P05120 415 aa22.08■■□□□ 1.13
XRCC3-204ENST00000553361 RTF1Q92541 710 aaKnown RBP22.07■■□□□ 1.12
XRCC3-204ENST00000553361 N4BP2Q86UW6 1770 aaPredicted RBP22.07■■□□□ 1.12
XRCC3-204ENST00000553361 A1BGP04217 495 aa22.06■■□□□ 1.12
XRCC3-204ENST00000553361 MCM10Q7L590 875 aa22.06■■□□□ 1.12
XRCC3-204ENST00000553361 TBC1D2BQ9UPU7 963 aa22.06■■□□□ 1.12
XRCC3-204ENST00000553361 CEMIPQ8WUJ3 1361 aa22.06■■□□□ 1.12
XRCC3-204ENST00000553361 ADAMTS7Q9UKP4 1686 aa22.06■■□□□ 1.12
XRCC3-204ENST00000553361 KIF13BQ9NQT8 1826 aa22.05■■□□□ 1.12
XRCC3-204ENST00000553361 DCTN1Q14203 1278 aa22.04■■□□□ 1.12
XRCC3-204ENST00000553361 C9orf131Q5VYM1 1079 aa22.04■■□□□ 1.12
XRCC3-204ENST00000553361 NPM2Q86SE8 214 aaKnown RBP22.04■■□□□ 1.12
XRCC3-204ENST00000553361 KIAA1551Q9HCM1 1747 aa22.03■■□□□ 1.12
XRCC3-204ENST00000553361 IL6STP40189 918 aaPredicted RBP22.03■■□□□ 1.12
XRCC3-204ENST00000553361 KIF3CO14782 793 aa22.02■■□□□ 1.12
XRCC3-204ENST00000553361 TBC1D9BQ66K14 1250 aa22.02■■□□□ 1.12
XRCC3-204ENST00000553361 USP16Q9Y5T5 823 aa22.02■■□□□ 1.12
XRCC3-204ENST00000553361 PRAMEF22A3QJZ6 481 aa22■■□□□ 1.11
XRCC3-204ENST00000553361 PIP4K2AP48426 406 aaPredicted RBP22■■□□□ 1.11
XRCC3-204ENST00000553361 C2CD5Q86YS7 1000 aa22■■□□□ 1.11
XRCC3-204ENST00000553361 CEP350Q5VT06 3117 aa21.99■■□□□ 1.11
XRCC3-204ENST00000553361 CCDC24Q8N4L8 307 aa21.99■■□□□ 1.11
XRCC3-204ENST00000553361 RNF181Q9P0P0 153 aa21.99■■□□□ 1.11
XRCC3-204ENST00000553361 H0YIN7 160 aa21.98■■□□□ 1.11
XRCC3-204ENST00000553361 HTATSF1O43719 755 aaKnown RBP21.98■■□□□ 1.11
XRCC3-204ENST00000553361 NEFMP07197 916 aa21.98■■□□□ 1.11
XRCC3-204ENST00000553361 SNRPA1P09661 255 aaKnown RBP21.98■■□□□ 1.11
XRCC3-204ENST00000553361 TTLL6Q8N841 843 aa21.98■■□□□ 1.11
XRCC3-204ENST00000553361 NMRK2Q9NPI5 230 aa21.97■■□□□ 1.11
XRCC3-204ENST00000553361 MIS18AQ9NYP9 233 aa21.97■■□□□ 1.11
XRCC3-204ENST00000553361 CAMTA2O94983 1202 aa21.96■■□□□ 1.11
XRCC3-204ENST00000553361 HSPA6P17066 643 aa21.96■■□□□ 1.11
XRCC3-204ENST00000553361 TAF7Q15545 349 aaPredicted RBP21.96■■□□□ 1.11
XRCC3-204ENST00000553361 DZIP3Q86Y13 1208 aaKnown RBP21.96■■□□□ 1.11
XRCC3-204ENST00000553361 SETDB2Q96T68 719 aa21.96■■□□□ 1.11
XRCC3-204ENST00000553361 UBR2Q8IWV8 1755 aa21.96■■□□□ 1.11
XRCC3-204ENST00000553361 CARMIL3Q8ND23 1372 aa21.96■■□□□ 1.11
XRCC3-204ENST00000553361 VIRMAQ69YN4 1812 aaKnown RBP21.95■■□□□ 1.1
XRCC3-204ENST00000553361 NPHP1O15259 732 aa21.95■■□□□ 1.1
XRCC3-204ENST00000553361 ZNF622Q969S3 477 aaKnown RBP eCLIP21.95■■□□□ 1.1
XRCC3-204ENST00000553361 RASSF7Q02833 373 aa21.94■■□□□ 1.1
XRCC3-204ENST00000553361 PRR5LQ6MZQ0 368 aa21.94■■□□□ 1.1
XRCC3-204ENST00000553361 PDE6BP35913 854 aa21.93■■□□□ 1.1
XRCC3-204ENST00000553361 BRIP1Q9BX63 1249 aa21.93■■□□□ 1.1
XRCC3-204ENST00000553361 TOMM70O94826 608 aa21.92■■□□□ 1.1
XRCC3-204ENST00000553361 CNBD1Q8NA66 436 aa21.91■■□□□ 1.1
XRCC3-204ENST00000553361 PLEKHF1Q96S99 279 aa21.91■■□□□ 1.1
XRCC3-204ENST00000553361 ZNF219Q9P2Y4 722 aaPredicted RBP21.91■■□□□ 1.1
XRCC3-204ENST00000553361 NBPF26B4DH59 902 aa21.9■■□□□ 1.1
XRCC3-204ENST00000553361 NBPF10Q6P3W6 841 aaKnown RBP21.9■■□□□ 1.1
XRCC3-204ENST00000553361 NBPF15Q8N660 670 aa21.9■■□□□ 1.1
XRCC3-204ENST00000553361 BRCA1P38398 1863 aaKnown RBP21.9■■□□□ 1.1
XRCC3-204ENST00000553361 SIPA1L3O60292 1781 aaPredicted RBP21.89■■□□□ 1.1
XRCC3-204ENST00000553361 KDM2BQ8NHM5 1336 aa21.89■■□□□ 1.1
XRCC3-204ENST00000553361 LMNB1P20700 586 aa21.89■■□□□ 1.09
XRCC3-204ENST00000553361 ST5P78524 1137 aa21.89■■□□□ 1.09
XRCC3-204ENST00000553361 NFE2L2Q16236 605 aa21.89■■□□□ 1.09
XRCC3-204ENST00000553361 C16orf71Q8IYS4 520 aaPredicted RBP21.89■■□□□ 1.09
XRCC3-204ENST00000553361 THUMPD2Q9BTF0 503 aaKnown RBP21.89■■□□□ 1.09
XRCC3-204ENST00000553361 RRAGCQ9HB90 399 aa21.89■■□□□ 1.09
XRCC3-204ENST00000553361 PDZRN3Q9UPQ7 1066 aa21.89■■□□□ 1.09
XRCC3-204ENST00000553361 PRELPP51888 382 aa21.88■■□□□ 1.09
XRCC3-204ENST00000553361 CLEC4GQ6UXB4 293 aa21.88■■□□□ 1.09
XRCC3-204ENST00000553361 PNNQ9H307 717 aaKnown RBP21.88■■□□□ 1.09
XRCC3-204ENST00000553361 MAPK8IP3Q9UPT6 1336 aa21.87■■□□□ 1.09
XRCC3-204ENST00000553361 C21orf2O43822 256 aa21.87■■□□□ 1.09
XRCC3-204ENST00000553361 NBPF5PQ86XG9 351 aaPredicted RBP21.87■■□□□ 1.09
XRCC3-204ENST00000553361 PNISRQ8TF01 805 aaKnown RBP21.87■■□□□ 1.09
XRCC3-204ENST00000553361 ZNF652Q9Y2D9 606 aa21.87■■□□□ 1.09
XRCC3-204ENST00000553361 AFDNP55196 1824 aaKnown RBP21.87■■□□□ 1.09
XRCC3-204ENST00000553361 NRXN2Q9P2S2 1712 aa21.86■■□□□ 1.09
XRCC3-204ENST00000553361 NGEFQ8N5V2 710 aa21.86■■□□□ 1.09
XRCC3-204ENST00000553361 ARFGEF1Q9Y6D6 1849 aa21.85■■□□□ 1.09
XRCC3-204ENST00000553361 NFKBIEO00221 500 aa21.85■■□□□ 1.09
XRCC3-204ENST00000553361 DDX10Q13206 875 aaKnown RBP21.85■■□□□ 1.09
XRCC3-204ENST00000553361 FAM177BA6PVY3 158 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms