RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 BCL2L12Q9HB09 334 aa12.66□□□□□ -0.38
CHD8-203ENST00000553283 STARD3NLO95772 234 aa12.65□□□□□ -0.38
CHD8-203ENST00000553283 TTC5Q8N0Z6 440 aa12.65□□□□□ -0.38
CHD8-203ENST00000553283 COL15A1P39059 1388 aa12.65□□□□□ -0.38
CHD8-203ENST00000553283 NPC1L1Q9UHC9 1359 aa12.65□□□□□ -0.38
CHD8-203ENST00000553283 KCPQ6ZWJ8 1503 aa12.64□□□□□ -0.39
CHD8-203ENST00000553283 U2SURPO15042 1029 aaKnown RBP12.64□□□□□ -0.39
CHD8-203ENST00000553283 SERPINB2P05120 415 aa12.64□□□□□ -0.39
CHD8-203ENST00000553283 CANXP27824 592 aaKnown RBP12.64□□□□□ -0.39
CHD8-203ENST00000553283 APLP1P51693 650 aa12.64□□□□□ -0.39
CHD8-203ENST00000553283 EIF5P55010 431 aaKnown RBP12.64□□□□□ -0.39
CHD8-203ENST00000553283 IL17REQ8NFR9 667 aa12.64□□□□□ -0.39
CHD8-203ENST00000553283 GAS2L2Q8NHY3 880 aa12.64□□□□□ -0.39
CHD8-203ENST00000553283 RNF181Q9P0P0 153 aa12.64□□□□□ -0.39
CHD8-203ENST00000553283 ADAMTS7Q9UKP4 1686 aa12.64□□□□□ -0.39
CHD8-203ENST00000553283 A0A087WZG4 1122 aa12.63□□□□□ -0.39
CHD8-203ENST00000553283 GNAT3A8MTJ3 354 aa12.63□□□□□ -0.39
CHD8-203ENST00000553283 TEFQ10587 303 aa12.63□□□□□ -0.39
CHD8-203ENST00000553283 CNGB1Q14028 1251 aaPredicted RBP12.63□□□□□ -0.39
CHD8-203ENST00000553283 IFFO2Q5TF58 517 aa12.63□□□□□ -0.39
CHD8-203ENST00000553283 RBM46Q8TBY0 533 aaKnown RBP12.63□□□□□ -0.39
CHD8-203ENST00000553283 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
CHD8-203ENST00000553283 TEX13AQ9BXU3 409 aaPredicted RBP12.63□□□□□ -0.39
CHD8-203ENST00000553283 KDM2BQ8NHM5 1336 aa12.62□□□□□ -0.39
CHD8-203ENST00000553283 BRCA1P38398 1863 aaKnown RBP12.62□□□□□ -0.39
CHD8-203ENST00000553283 ZNF790Q6PG37 636 aa12.62□□□□□ -0.39
CHD8-203ENST00000553283 COL3A1P02461 1466 aaPredicted RBP12.61□□□□□ -0.39
CHD8-203ENST00000553283 BICDL1Q6ZP65 573 aa12.61□□□□□ -0.39
CHD8-203ENST00000553283 C16orf71Q8IYS4 520 aaPredicted RBP12.61□□□□□ -0.39
CHD8-203ENST00000553283 DNAJC5GQ8N7S2 189 aa12.61□□□□□ -0.39
CHD8-203ENST00000553283 TTLL6Q8N841 843 aa12.61□□□□□ -0.39
CHD8-203ENST00000553283 ARFGEF1Q9Y6D6 1849 aa12.6□□□□□ -0.39
CHD8-203ENST00000553283 HEG1Q9ULI3 1381 aa12.6□□□□□ -0.39
CHD8-203ENST00000553283 H0YIN7 160 aa12.6□□□□□ -0.39
CHD8-203ENST00000553283 C2CD5Q86YS7 1000 aa12.6□□□□□ -0.39
CHD8-203ENST00000553283 PHACTR3Q96KR7 559 aa12.6□□□□□ -0.39
CHD8-203ENST00000553283 RRAGCQ9HB90 399 aa12.6□□□□□ -0.39
CHD8-203ENST00000553283 IL6STP40189 918 aaPredicted RBP12.59□□□□□ -0.39
CHD8-203ENST00000553283 FSTL1Q12841 308 aa12.59□□□□□ -0.39
CHD8-203ENST00000553283 TBC1D9BQ66K14 1250 aa12.59□□□□□ -0.39
CHD8-203ENST00000553283 CFAP53Q96M91 514 aa12.59□□□□□ -0.39
CHD8-203ENST00000553283 FMNL2Q96PY5 1086 aa12.59□□□□□ -0.39
CHD8-203ENST00000553283 TBC1D2BQ9UPU7 963 aa12.59□□□□□ -0.39
CHD8-203ENST00000553283 LMNB1P20700 586 aa12.58□□□□□ -0.4
CHD8-203ENST00000553283 PRKAR2BP31323 418 aa12.58□□□□□ -0.4
CHD8-203ENST00000553283 RASSF7Q02833 373 aa12.58□□□□□ -0.4
CHD8-203ENST00000553283 BRIP1Q9BX63 1249 aa12.58□□□□□ -0.4
CHD8-203ENST00000553283 PDZRN3Q9UPQ7 1066 aa12.58□□□□□ -0.4
CHD8-203ENST00000553283 ZNF330Q9Y3S2 320 aaPredicted RBP12.58□□□□□ -0.4
CHD8-203ENST00000553283 ZC3H4Q9UPT8 1303 aaKnown RBP12.58□□□□□ -0.4
CHD8-203ENST00000553283 CEMIPQ8WUJ3 1361 aa12.57□□□□□ -0.4
CHD8-203ENST00000553283 BTBD11A6QL63 1104 aa12.57□□□□□ -0.4
CHD8-203ENST00000553283 KCNQ3O43525 872 aa12.57□□□□□ -0.4
CHD8-203ENST00000553283 A1BGP04217 495 aa12.57□□□□□ -0.4
CHD8-203ENST00000553283 PDE6BP35913 854 aa12.57□□□□□ -0.4
CHD8-203ENST00000553283 PRELPP51888 382 aa12.57□□□□□ -0.4
CHD8-203ENST00000553283 NPM2Q86SE8 214 aaKnown RBP12.57□□□□□ -0.4
CHD8-203ENST00000553283 RSPH6AQ9H0K4 717 aa12.57□□□□□ -0.4
CHD8-203ENST00000553283 NUDCQ9Y266 331 aa12.57□□□□□ -0.4
CHD8-203ENST00000553283 CARMIL3Q8ND23 1372 aa12.56□□□□□ -0.4
CHD8-203ENST00000553283 GLTPD2A6NH11 291 aa12.56□□□□□ -0.4
CHD8-203ENST00000553283 PRR5LQ6MZQ0 368 aa12.56□□□□□ -0.4
CHD8-203ENST00000553283 SETDB2Q96T68 719 aa12.56□□□□□ -0.4
CHD8-203ENST00000553283 NRXN2Q9P2S2 1712 aa12.56□□□□□ -0.4
CHD8-203ENST00000553283 UBR2Q8IWV8 1755 aa12.56□□□□□ -0.4
CHD8-203ENST00000553283 CAMTA2O94983 1202 aa12.55□□□□□ -0.4
CHD8-203ENST00000553283 SMC1BQ8NDV3 1235 aa12.55□□□□□ -0.4
CHD8-203ENST00000553283 ZNF622Q969S3 477 aaKnown RBP eCLIP12.55□□□□□ -0.41e-6■■□□□ 12.9
CHD8-203ENST00000553283 USP16Q9Y5T5 823 aa12.55□□□□□ -0.4
CHD8-203ENST00000553283 AFDNP55196 1824 aaKnown RBP12.55□□□□□ -0.4
CHD8-203ENST00000553283 NFKBIEO00221 500 aa12.54□□□□□ -0.4
CHD8-203ENST00000553283 U2AF1L5P0DN76 240 aaPredicted RBP12.54□□□□□ -0.4
CHD8-203ENST00000553283 VEGFAP15692 232 aaPredicted RBP12.54□□□□□ -0.4
CHD8-203ENST00000553283 PPP2R1AP30153 589 aa12.54□□□□□ -0.4
CHD8-203ENST00000553283 U2AF1Q01081 240 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHD8-203ENST00000553283 CCDC24Q8N4L8 307 aa12.54□□□□□ -0.4
CHD8-203ENST00000553283 VIRMAQ69YN4 1812 aaKnown RBP12.53□□□□□ -0.4
CHD8-203ENST00000553283 SBF1O95248 1867 aa12.53□□□□□ -0.4
CHD8-203ENST00000553283 C21orf2O43822 256 aa12.53□□□□□ -0.4
CHD8-203ENST00000553283 SNRPA1P09661 255 aaKnown RBP12.53□□□□□ -0.4
CHD8-203ENST00000553283 HTRA3P83110 453 aa12.53□□□□□ -0.4
CHD8-203ENST00000553283 MCM10Q7L590 875 aa12.53□□□□□ -0.4
CHD8-203ENST00000553283 DZIP3Q86Y13 1208 aaKnown RBP12.53□□□□□ -0.4
CHD8-203ENST00000553283 CNBD1Q8NA66 436 aa12.53□□□□□ -0.4
CHD8-203ENST00000553283 RTF1Q92541 710 aaKnown RBP12.53□□□□□ -0.4
CHD8-203ENST00000553283 KLRG1Q96E93 195 aa12.53□□□□□ -0.4
CHD8-203ENST00000553283 PRAMEF22A3QJZ6 481 aa12.52□□□□□ -0.41
CHD8-203ENST00000553283 HTATSF1O43719 755 aaKnown RBP12.52□□□□□ -0.41
CHD8-203ENST00000553283 STYK1Q6J9G0 422 aa12.52□□□□□ -0.41
CHD8-203ENST00000553283 DPY19L2Q6NUT2 758 aa12.52□□□□□ -0.41
CHD8-203ENST00000553283 CLEC4GQ6UXB4 293 aa12.52□□□□□ -0.41
CHD8-203ENST00000553283 CNKSR1Q969H4 720 aa12.52□□□□□ -0.41
CHD8-203ENST00000553283 ZNF219Q9P2Y4 722 aaPredicted RBP12.52□□□□□ -0.41
CHD8-203ENST00000553283 NPHP1O15259 732 aa12.51□□□□□ -0.41
CHD8-203ENST00000553283 SRGNP10124 158 aa12.51□□□□□ -0.41
CHD8-203ENST00000553283 PIP4K2AP48426 406 aaPredicted RBP12.51□□□□□ -0.41
CHD8-203ENST00000553283 ST5P78524 1137 aa12.51□□□□□ -0.41
CHD8-203ENST00000553283 JMYQ8N9B5 988 aa12.51□□□□□ -0.41
CHD8-203ENST00000553283 POTECB2RU33 542 aa12.5□□□□□ -0.41
CHD8-203ENST00000553283 DCTN1Q14203 1278 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms