RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 FTSJ3Q8IY81 847 aaKnown RBP23.57■■□□□ 1.36
LRP1-204ENST00000553277 SEPT12Q8IYM1 358 aa23.57■■□□□ 1.36
LRP1-204ENST00000553277 DDX19BQ9UMR2 479 aa23.57■■□□□ 1.36
LRP1-204ENST00000553277 KAT6BQ8WYB5 2073 aa23.56■■□□□ 1.36
LRP1-204ENST00000553277 ATF7IPQ6VMQ6 1270 aa23.56■■□□□ 1.36
LRP1-204ENST00000553277 PRIM1P49642 420 aaKnown RBP23.55■■□□□ 1.36
LRP1-204ENST00000553277 NOB1Q9ULX3 412 aaKnown RBP23.55■■□□□ 1.36
LRP1-204ENST00000553277 SNRPA1P09661 255 aaKnown RBP23.54■■□□□ 1.36
LRP1-204ENST00000553277 HDAC1Q13547 482 aaPredicted RBP23.54■■□□□ 1.36
LRP1-204ENST00000553277 HDGFL1Q5TGJ6 251 aa23.54■■□□□ 1.36
LRP1-204ENST00000553277 ATG3Q9NT62 314 aa23.54■■□□□ 1.36
LRP1-204ENST00000553277 TRIM27P14373 513 aa23.53■■□□□ 1.36
LRP1-204ENST00000553277 VSIG10Q8N0Z9 540 aa23.53■■□□□ 1.36
LRP1-204ENST00000553277 SLC4A2P04920 1241 aa23.52■■□□□ 1.36
LRP1-204ENST00000553277 STK31Q9BXU1 1019 aa23.52■■□□□ 1.36
LRP1-204ENST00000553277 RGS17Q9UGC6 210 aaPredicted RBP23.52■■□□□ 1.36
LRP1-204ENST00000553277 ASAP1Q9ULH1 1129 aa23.52■■□□□ 1.36
LRP1-204ENST00000553277 TNNQ9UQP3 1299 aa23.52■■□□□ 1.36
LRP1-204ENST00000553277 C5P01031 1676 aa23.51■■□□□ 1.35
LRP1-204ENST00000553277 PTPRCP08575 1304 aa23.51■■□□□ 1.35
LRP1-204ENST00000553277 A0A0G2JS52 829 aa23.51■■□□□ 1.35
LRP1-204ENST00000553277 PRAMEF22A3QJZ6 481 aa23.5■■□□□ 1.35
LRP1-204ENST00000553277 CHMP4BQ9H444 224 aaKnown RBP23.49■■□□□ 1.35
LRP1-204ENST00000553277 LAMB4A4D0S4 1761 aa23.48■■□□□ 1.35
LRP1-204ENST00000553277 DBF4Q9UBU7 674 aaPredicted RBP23.48■■□□□ 1.35
LRP1-204ENST00000553277 RGS12O14924 1447 aa23.48■■□□□ 1.35
LRP1-204ENST00000553277 API5Q9BZZ5 524 aaKnown RBP23.48■■□□□ 1.35
LRP1-204ENST00000553277 USP16Q9Y5T5 823 aa23.48■■□□□ 1.35
LRP1-204ENST00000553277 ERBB4Q15303 1308 aa23.47■■□□□ 1.35
LRP1-204ENST00000553277 BRWD3Q6RI45 1802 aa23.47■■□□□ 1.35
LRP1-204ENST00000553277 EIF2S2P20042 333 aaKnown RBP23.47■■□□□ 1.35
LRP1-204ENST00000553277 PDIA6Q15084 440 aa23.47■■□□□ 1.35
LRP1-204ENST00000553277 PDZRN3Q9UPQ7 1066 aa23.47■■□□□ 1.35
LRP1-204ENST00000553277 NHSQ6T4R5 1651 aa23.47■■□□□ 1.35
LRP1-204ENST00000553277 SBF2Q86WG5 1849 aa23.46■■□□□ 1.35
LRP1-204ENST00000553277 ABCC4O15439 1325 aa23.46■■□□□ 1.35
LRP1-204ENST00000553277 SYTL4Q96C24 671 aaPredicted RBP23.46■■□□□ 1.35
LRP1-204ENST00000553277 ACSBG1Q96GR2 724 aa23.46■■□□□ 1.35
LRP1-204ENST00000553277 TEX13AQ9BXU3 409 aaPredicted RBP23.46■■□□□ 1.35
LRP1-204ENST00000553277 DDX21Q9NR30 783 aaKnown RBP eCLIP23.46■■□□□ 1.35
LRP1-204ENST00000553277 KCNQ2O43526 872 aa23.45■■□□□ 1.34
LRP1-204ENST00000553277 RXRBP28702 533 aa23.45■■□□□ 1.34
LRP1-204ENST00000553277 RTL5Q5HYW3 569 aaPredicted RBP23.45■■□□□ 1.34
LRP1-204ENST00000553277 G2E3Q7L622 706 aa23.45■■□□□ 1.34
LRP1-204ENST00000553277 CHPF2Q9P2E5 772 aa23.45■■□□□ 1.34
LRP1-204ENST00000553277 CICQ96RK0 1608 aaPredicted RBP23.45■■□□□ 1.34
LRP1-204ENST00000553277 PTCD1O75127 700 aaKnown RBP23.44■■□□□ 1.34
LRP1-204ENST00000553277 FLIIQ13045 1269 aa23.44■■□□□ 1.34
LRP1-204ENST00000553277 ZBTB40Q9NUA8 1239 aa23.44■■□□□ 1.34
LRP1-204ENST00000553277 ZNF831Q5JPB2 1677 aa23.44■■□□□ 1.34
LRP1-204ENST00000553277 KRT27Q7Z3Y8 459 aa23.44■■□□□ 1.34
LRP1-204ENST00000553277 NECTIN2Q92692 538 aa23.44■■□□□ 1.34
LRP1-204ENST00000553277 SMARCC1Q92922 1105 aaPredicted RBP23.44■■□□□ 1.34
LRP1-204ENST00000553277 HYPKQ9NX55 129 aa23.44■■□□□ 1.34
LRP1-204ENST00000553277 LRP10Q7Z4F1 713 aa23.43■■□□□ 1.34
LRP1-204ENST00000553277 SLC4A9Q96Q91 983 aa23.43■■□□□ 1.34
LRP1-204ENST00000553277 ITPRIPQ8IWB1 547 aa23.42■■□□□ 1.34
LRP1-204ENST00000553277 SMC5Q8IY18 1101 aa23.42■■□□□ 1.34
LRP1-204ENST00000553277 DAXXQ9UER7 740 aaPredicted RBP23.42■■□□□ 1.34
LRP1-204ENST00000553277 NBR1Q14596 966 aa23.41■■□□□ 1.34
LRP1-204ENST00000553277 FAM196AQ6ZSG2 479 aa23.41■■□□□ 1.34
LRP1-204ENST00000553277 POTEAQ6S8J7 498 aa23.41■■□□□ 1.34
LRP1-204ENST00000553277 TMEM57Q8N5G2 664 aa23.41■■□□□ 1.34
LRP1-204ENST00000553277 PROSER3Q2NL68 480 aa23.4■■□□□ 1.34
LRP1-204ENST00000553277 INTS3Q68E01 1043 aaKnown RBP23.4■■□□□ 1.34
LRP1-204ENST00000553277 PHAXQ9H814 394 aaKnown RBP23.39■■□□□ 1.34
LRP1-204ENST00000553277 BTAF1O14981 1849 aa23.39■■□□□ 1.33
LRP1-204ENST00000553277 PALLDQ8WX93 1383 aa23.38■■□□□ 1.33
LRP1-204ENST00000553277 FAM182BQ5T319 152 aa23.38■■□□□ 1.33
LRP1-204ENST00000553277 BCL11BQ9C0K0 894 aaPredicted RBP23.38■■□□□ 1.33
LRP1-204ENST00000553277 TJP1Q07157 1748 aa23.37■■□□□ 1.33
LRP1-204ENST00000553277 LOC102724428A0A0B4J2F2 783 aa23.37■■□□□ 1.33
LRP1-204ENST00000553277 NBPF26B4DH59 902 aa23.37■■□□□ 1.33
LRP1-204ENST00000553277 STARD3NLO95772 234 aa23.37■■□□□ 1.33
LRP1-204ENST00000553277 SIK1P57059 783 aa23.37■■□□□ 1.33
LRP1-204ENST00000553277 NBPF14Q5TI25 921 aa23.37■■□□□ 1.33
LRP1-204ENST00000553277 NBPF10Q6P3W6 841 aaKnown RBP23.37■■□□□ 1.33
LRP1-204ENST00000553277 PTF1AQ7RTS3 328 aa23.37■■□□□ 1.33
LRP1-204ENST00000553277 DNAJC10Q8IXB1 793 aa23.37■■□□□ 1.33
LRP1-204ENST00000553277 NBPF15Q8N660 670 aa23.37■■□□□ 1.33
LRP1-204ENST00000553277 RBM42Q9BTD8 480 aaKnown RBP23.37■■□□□ 1.33
LRP1-204ENST00000553277 FKBP5Q13451 457 aaPredicted RBP23.36■■□□□ 1.33
LRP1-204ENST00000553277 PXDNLA1KZ92 1463 aa23.36■■□□□ 1.33
LRP1-204ENST00000553277 ANXA1P04083 346 aa23.35■■□□□ 1.33
LRP1-204ENST00000553277 CYP19A1P11511 503 aaPredicted RBP23.35■■□□□ 1.33
LRP1-204ENST00000553277 UPF2Q9HAU5 1272 aaKnown RBP23.35■■□□□ 1.33
LRP1-204ENST00000553277 N4BP2Q86UW6 1770 aaPredicted RBP23.35■■□□□ 1.33
LRP1-204ENST00000553277 A1BGP04217 495 aa23.33■■□□□ 1.33
LRP1-204ENST00000553277 ADCY9O60503 1353 aa23.33■■□□□ 1.32
LRP1-204ENST00000553277 EP400Q96L91 3159 aa23.33■■□□□ 1.32
LRP1-204ENST00000553277 DEKP35659 375 aaKnown RBP23.32■■□□□ 1.32
LRP1-204ENST00000553277 KSR2Q6VAB6 950 aa23.32■■□□□ 1.32
LRP1-204ENST00000553277 IBTKQ9P2D0 1353 aaPredicted RBP23.32■■□□□ 1.32
LRP1-204ENST00000553277 ZBTB7BO15156 539 aaPredicted RBP23.32■■□□□ 1.32
LRP1-204ENST00000553277 CCT4P50991 539 aaKnown RBP23.32■■□□□ 1.32
LRP1-204ENST00000553277 LY75O60449 1722 aa23.32■■□□□ 1.32
LRP1-204ENST00000553277 RREB1Q92766 1687 aa23.31■■□□□ 1.32
LRP1-204ENST00000553277 F6X3S4 739 aa23.31■■□□□ 1.32
LRP1-204ENST00000553277 ATP10DQ9P241 1426 aa23.31■■□□□ 1.32
LRP1-204ENST00000553277 PI4KAP2A4QPH2 592 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms