RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 A0A0G2JLW4 131 aa21.15■□□□□ 0.98
CDK4-215ENST00000553237 ZEB1P37275 1124 aaPredicted RBP21.15■□□□□ 0.98
CDK4-215ENST00000553237 DDR1Q08345 913 aa21.15■□□□□ 0.98
CDK4-215ENST00000553237 FMNL2Q96PY5 1086 aa21.15■□□□□ 0.98
CDK4-215ENST00000553237 TGFB2P61812 414 aa21.14■□□□□ 0.97
CDK4-215ENST00000553237 COL15A1P39059 1388 aa21.13■□□□□ 0.97
CDK4-215ENST00000553237 NARFQ9UHQ1 456 aa21.13■□□□□ 0.97
CDK4-215ENST00000553237 PXDNLA1KZ92 1463 aa21.13■□□□□ 0.97
CDK4-215ENST00000553237 UBR2Q8IWV8 1755 aa21.13■□□□□ 0.97
CDK4-215ENST00000553237 C10orf71Q711Q0 1435 aa21.12■□□□□ 0.97
CDK4-215ENST00000553237 NEFMP07197 916 aa21.12■□□□□ 0.97
CDK4-215ENST00000553237 DPEP1P16444 411 aa21.12■□□□□ 0.97
CDK4-215ENST00000553237 TM4SF1P30408 202 aa21.12■□□□□ 0.97
CDK4-215ENST00000553237 TEX13AQ9BXU3 409 aaPredicted RBP21.12■□□□□ 0.97
CDK4-215ENST00000553237 SIPA1L3O60292 1781 aaPredicted RBP21.11■□□□□ 0.97
CDK4-215ENST00000553237 ZNF330Q9Y3S2 320 aaPredicted RBP21.11■□□□□ 0.97
CDK4-215ENST00000553237 POLRMTO00411 1230 aaKnown RBP21.1■□□□□ 0.97
CDK4-215ENST00000553237 HTATSF1O43719 755 aaKnown RBP21.1■□□□□ 0.97
CDK4-215ENST00000553237 A1BGP04217 495 aa21.1■□□□□ 0.97
CDK4-215ENST00000553237 EIF5P55010 431 aaKnown RBP21.1■□□□□ 0.97
CDK4-215ENST00000553237 RALBP1Q15311 655 aa21.1■□□□□ 0.97
CDK4-215ENST00000553237 BCL2L12Q9HB09 334 aa21.1■□□□□ 0.97
CDK4-215ENST00000553237 BCS1LQ9Y276 419 aa21.1■□□□□ 0.97
CDK4-215ENST00000553237 NFIXQ14938 502 aa21.09■□□□□ 0.97
CDK4-215ENST00000553237 PLEKHF1Q96S99 279 aa21.09■□□□□ 0.97
CDK4-215ENST00000553237 PRAMEF22A3QJZ6 481 aa21.08■□□□□ 0.97
CDK4-215ENST00000553237 MIS18AQ9NYP9 233 aa21.08■□□□□ 0.97
CDK4-215ENST00000553237 USP16Q9Y5T5 823 aa21.08■□□□□ 0.97
CDK4-215ENST00000553237 N4BP2Q86UW6 1770 aaPredicted RBP21.08■□□□□ 0.96
CDK4-215ENST00000553237 KIF13BQ9NQT8 1826 aa21.07■□□□□ 0.96
CDK4-215ENST00000553237 A0A087WZG4 1122 aa21.07■□□□□ 0.96
CDK4-215ENST00000553237 BICDL1Q6ZP65 573 aa21.07■□□□□ 0.96
CDK4-215ENST00000553237 TBC1D2BQ9UPU7 963 aa21.07■□□□□ 0.96
CDK4-215ENST00000553237 KCNA3P22001 575 aa21.06■□□□□ 0.96
CDK4-215ENST00000553237 TAF7Q15545 349 aaPredicted RBP21.06■□□□□ 0.96
CDK4-215ENST00000553237 KIAA1551Q9HCM1 1747 aa21.05■□□□□ 0.96
CDK4-215ENST00000553237 CHRNA5P30532 468 aa21.05■□□□□ 0.96
CDK4-215ENST00000553237 IL6STP40189 918 aaPredicted RBP21.05■□□□□ 0.96
CDK4-215ENST00000553237 PIP4K2AP48426 406 aaPredicted RBP21.05■□□□□ 0.96
CDK4-215ENST00000553237 NFE2L2Q16236 605 aa21.05■□□□□ 0.96
CDK4-215ENST00000553237 PNNQ9H307 717 aaKnown RBP21.05■□□□□ 0.96
CDK4-215ENST00000553237 MAPK8IP3Q9UPT6 1336 aa21.04■□□□□ 0.96
CDK4-215ENST00000553237 SERPINB2P05120 415 aa21.04■□□□□ 0.96
CDK4-215ENST00000553237 SNRPA1P09661 255 aaKnown RBP21.04■□□□□ 0.96
CDK4-215ENST00000553237 NPM2Q86SE8 214 aaKnown RBP21.04■□□□□ 0.96
CDK4-215ENST00000553237 THUMPD2Q9BTF0 503 aaKnown RBP21.04■□□□□ 0.96
CDK4-215ENST00000553237 ARHGAP27Q6ZUM4 889 aa21.03■□□□□ 0.96
CDK4-215ENST00000553237 PIM2Q9P1W9 311 aa21.03■□□□□ 0.96
CDK4-215ENST00000553237 TBC1D9BQ66K14 1250 aa21.02■□□□□ 0.96
CDK4-215ENST00000553237 MYBBP1AQ9BQG0 1328 aaKnown RBP21.02■□□□□ 0.95
CDK4-215ENST00000553237 ATP10DQ9P241 1426 aa21.01■□□□□ 0.95
CDK4-215ENST00000553237 DALRD3Q5D0E6 543 aaKnown RBP21■□□□□ 0.95
CDK4-215ENST00000553237 ZNF526Q8TF50 670 aaPredicted RBP21■□□□□ 0.95
CDK4-215ENST00000553237 DZIP3Q86Y13 1208 aaKnown RBP20.99■□□□□ 0.95
CDK4-215ENST00000553237 GIGYF1O75420 1035 aaPredicted RBP20.98■□□□□ 0.95
CDK4-215ENST00000553237 CAMTA2O94983 1202 aa20.98■□□□□ 0.95
CDK4-215ENST00000553237 PNISRQ8TF01 805 aaKnown RBP20.98■□□□□ 0.95
CDK4-215ENST00000553237 NBPF26B4DH59 902 aa20.97■□□□□ 0.95
CDK4-215ENST00000553237 RIPK4P57078 832 aa20.97■□□□□ 0.95
CDK4-215ENST00000553237 C1QTNF8P60827 252 aa20.97■□□□□ 0.95
CDK4-215ENST00000553237 NBPF10Q6P3W6 841 aaKnown RBP20.97■□□□□ 0.95
CDK4-215ENST00000553237 CCDC24Q8N4L8 307 aa20.97■□□□□ 0.95
CDK4-215ENST00000553237 NBPF15Q8N660 670 aa20.97■□□□□ 0.95
CDK4-215ENST00000553237 DLG5Q8TDM6 1919 aa20.97■□□□□ 0.95
CDK4-215ENST00000553237 ADCY9O60503 1353 aa20.97■□□□□ 0.95
CDK4-215ENST00000553237 CCDC146Q8IYE0 955 aa20.96■□□□□ 0.95
CDK4-215ENST00000553237 AFDNP55196 1824 aaKnown RBP20.96■□□□□ 0.95
CDK4-215ENST00000553237 CARMIL3Q8ND23 1372 aa20.96■□□□□ 0.95
CDK4-215ENST00000553237 C2CD5Q86YS7 1000 aa20.95■□□□□ 0.94
CDK4-215ENST00000553237 SETDB2Q96T68 719 aa20.95■□□□□ 0.94
CDK4-215ENST00000553237 GPBP1L1Q9HC44 474 aaPredicted RBP20.95■□□□□ 0.94
CDK4-215ENST00000553237 TMPOP42166 694 aaKnown RBP20.94■□□□□ 0.94
CDK4-215ENST00000553237 EIF4A1P60842 406 aaKnown RBP20.94■□□□□ 0.94
CDK4-215ENST00000553237 RRP7AQ9Y3A4 280 aaKnown RBP20.94■□□□□ 0.94
CDK4-215ENST00000553237 BRCA1P38398 1863 aaKnown RBP20.94■□□□□ 0.94
CDK4-215ENST00000553237 NEUROD2Q15784 382 aa20.93■□□□□ 0.94
CDK4-215ENST00000553237 NRXN2Q9P2S2 1712 aa20.92■□□□□ 0.94
CDK4-215ENST00000553237 H0YIN7 160 aa20.92■□□□□ 0.94
CDK4-215ENST00000553237 NPHP1O15259 732 aa20.92■□□□□ 0.94
CDK4-215ENST00000553237 WDR43Q15061 677 aaKnown RBP eCLIP20.92■□□□□ 0.94
CDK4-215ENST00000553237 PRR5LQ6MZQ0 368 aa20.92■□□□□ 0.94
CDK4-215ENST00000553237 NGEFQ8N5V2 710 aa20.92■□□□□ 0.94
CDK4-215ENST00000553237 PRKRIP1Q9H875 184 aaPredicted RBP20.92■□□□□ 0.94
CDK4-215ENST00000553237 SCN7AQ01118 1682 aa20.92■□□□□ 0.94
CDK4-215ENST00000553237 TSPYL4Q9UJ04 414 aa20.91■□□□□ 0.94
CDK4-215ENST00000553237 C9orf131Q5VYM1 1079 aa20.9■□□□□ 0.94
CDK4-215ENST00000553237 TTLL6Q8N841 843 aa20.9■□□□□ 0.94
CDK4-215ENST00000553237 CNBD1Q8NA66 436 aa20.9■□□□□ 0.94
CDK4-215ENST00000553237 BRIP1Q9BX63 1249 aa20.9■□□□□ 0.94
CDK4-215ENST00000553237 ADAMTS8Q9UP79 889 aa20.9■□□□□ 0.94
CDK4-215ENST00000553237 CLEC4GQ6UXB4 293 aa20.89■□□□□ 0.93
CDK4-215ENST00000553237 ZNF622Q969S3 477 aaKnown RBP eCLIP20.89■□□□□ 0.93
CDK4-215ENST00000553237 ZNF652Q9Y2D9 606 aa20.89■□□□□ 0.93
CDK4-215ENST00000553237 KDM3BQ7LBC6 1761 aa20.88■□□□□ 0.93
CDK4-215ENST00000553237 PDE6BP35913 854 aa20.88■□□□□ 0.93
CDK4-215ENST00000553237 LMOD3Q0VAK6 560 aa20.88■□□□□ 0.93
CDK4-215ENST00000553237 HLFQ16534 295 aa20.88■□□□□ 0.93
CDK4-215ENST00000553237 RUNDC1Q96C34 613 aa20.88■□□□□ 0.93
CDK4-215ENST00000553237 ARFGEF1Q9Y6D6 1849 aa20.88■□□□□ 0.93
CDK4-215ENST00000553237 MYL6BP14649 208 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms