RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 TAOK3Q9H2K8 898 aa12.43□□□□□ -0.42
PRKCH-203ENST00000552875 ATG3Q9NT62 314 aa12.43□□□□□ -0.42
PRKCH-203ENST00000552875 HACL1Q9UJ83 578 aa12.43□□□□□ -0.42
PRKCH-203ENST00000552875 POTEDQ86YR6 584 aa12.42□□□□□ -0.42
PRKCH-203ENST00000552875 C2CD5Q86YS7 1000 aa12.42□□□□□ -0.42
PRKCH-203ENST00000552875 LTBP3Q9NS15 1303 aa12.41□□□□□ -0.42
PRKCH-203ENST00000552875 ZPR1O75312 459 aa12.41□□□□□ -0.42
PRKCH-203ENST00000552875 HABP4Q5JVS0 413 aaKnown RBP12.41□□□□□ -0.42
PRKCH-203ENST00000552875 CYP4F22Q6NT55 531 aa12.41□□□□□ -0.42
PRKCH-203ENST00000552875 DDX21Q9NR30 783 aaKnown RBP eCLIP12.41□□□□□ -0.42
PRKCH-203ENST00000552875 MAP2P11137 1827 aaKnown RBP12.41□□□□□ -0.42
PRKCH-203ENST00000552875 TM4SF1P30408 202 aa12.4□□□□□ -0.42
PRKCH-203ENST00000552875 EPHX2P34913 555 aa12.4□□□□□ -0.42
PRKCH-203ENST00000552875 MAP1SQ66K74 1059 aaPredicted RBP12.4□□□□□ -0.42
PRKCH-203ENST00000552875 SRP68Q9UHB9 627 aaKnown RBP12.4□□□□□ -0.42
PRKCH-203ENST00000552875 PDZRN3Q9UPQ7 1066 aa12.4□□□□□ -0.42
PRKCH-203ENST00000552875 BRPF1P55201 1214 aaPredicted RBP12.39□□□□□ -0.43
PRKCH-203ENST00000552875 SOGA3Q5TF21 947 aa12.39□□□□□ -0.43
PRKCH-203ENST00000552875 KDRP35968 1356 aa12.39□□□□□ -0.43
PRKCH-203ENST00000552875 THSD7BQ9C0I4 1608 aa12.38□□□□□ -0.43
PRKCH-203ENST00000552875 DLL1O00548 723 aa12.38□□□□□ -0.43
PRKCH-203ENST00000552875 C21orf2O43822 256 aa12.38□□□□□ -0.43
PRKCH-203ENST00000552875 IFNL2Q8IZJ0 200 aa12.38□□□□□ -0.43
PRKCH-203ENST00000552875 ITGB4P16144 1822 aa12.37□□□□□ -0.43
PRKCH-203ENST00000552875 ZNF622Q969S3 477 aaKnown RBP eCLIP12.37□□□□□ -0.43
PRKCH-203ENST00000552875 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.37□□□□□ -0.43
PRKCH-203ENST00000552875 TLL2Q9Y6L7 1015 aa12.36□□□□□ -0.43
PRKCH-203ENST00000552875 SCN4AP35499 1836 aa12.36□□□□□ -0.43
PRKCH-203ENST00000552875 AOC2O75106 756 aa12.35□□□□□ -0.43
PRKCH-203ENST00000552875 SERPINB2P05120 415 aa12.35□□□□□ -0.43
PRKCH-203ENST00000552875 CRKLP46109 303 aaKnown RBP12.35□□□□□ -0.43
PRKCH-203ENST00000552875 RRS1Q15050 365 aaKnown RBP12.35□□□□□ -0.43
PRKCH-203ENST00000552875 SLC4A9Q96Q91 983 aa12.35□□□□□ -0.43
PRKCH-203ENST00000552875 SLC12A5Q9H2X9 1139 aa12.35□□□□□ -0.43
PRKCH-203ENST00000552875 A0A1W2PP64 1363 aa12.34□□□□□ -0.43
PRKCH-203ENST00000552875 INSRP06213 1382 aa12.34□□□□□ -0.43
PRKCH-203ENST00000552875 PDE6BP35913 854 aa12.34□□□□□ -0.43
PRKCH-203ENST00000552875 USPL1Q5W0Q7 1092 aa12.34□□□□□ -0.43
PRKCH-203ENST00000552875 LTBP1Q14766 1721 aa12.34□□□□□ -0.43
PRKCH-203ENST00000552875 RGPD2P0DJD1 1756 aa12.33□□□□□ -0.44
PRKCH-203ENST00000552875 ERVV-2B6SEH9 535 aa12.33□□□□□ -0.44
PRKCH-203ENST00000552875 PHKG2P15735 406 aa12.33□□□□□ -0.44
PRKCH-203ENST00000552875 FBLN1P23142 703 aa12.33□□□□□ -0.44
PRKCH-203ENST00000552875 NFIXQ14938 502 aa12.33□□□□□ -0.44
PRKCH-203ENST00000552875 HHIPL1Q96JK4 782 aa12.33□□□□□ -0.44
PRKCH-203ENST00000552875 ZNF831Q5JPB2 1677 aa12.32□□□□□ -0.44
PRKCH-203ENST00000552875 HSP90AB1P08238 724 aaKnown RBP12.32□□□□□ -0.44
PRKCH-203ENST00000552875 HSP90AB2PQ58FF8 381 aa12.32□□□□□ -0.44
PRKCH-203ENST00000552875 CNKSR1Q969H4 720 aa12.32□□□□□ -0.44
PRKCH-203ENST00000552875 RNF123Q5XPI4 1314 aa12.32□□□□□ -0.44
PRKCH-203ENST00000552875 FLT4P35916 1363 aa12.31□□□□□ -0.44
PRKCH-203ENST00000552875 KIF24Q5T7B8 1368 aa12.31□□□□□ -0.44
PRKCH-203ENST00000552875 RAB3GAP2Q9H2M9 1393 aa12.31□□□□□ -0.44
PRKCH-203ENST00000552875 LMOD1P29536 600 aaPredicted RBP12.31□□□□□ -0.44
PRKCH-203ENST00000552875 NOGQ13253 232 aa12.31□□□□□ -0.44
PRKCH-203ENST00000552875 CIAPIN1Q6FI81 312 aa12.31□□□□□ -0.44
PRKCH-203ENST00000552875 ROCK2O75116 1388 aaKnown RBP12.3□□□□□ -0.44
PRKCH-203ENST00000552875 CCDC88AQ3V6T2 1871 aa12.3□□□□□ -0.44
PRKCH-203ENST00000552875 PTCD1O75127 700 aaKnown RBP12.3□□□□□ -0.44
PRKCH-203ENST00000552875 AKAP4Q5JQC9 854 aa12.3□□□□□ -0.44
PRKCH-203ENST00000552875 BICDL1Q6ZP65 573 aa12.3□□□□□ -0.44
PRKCH-203ENST00000552875 SAPCD2Q86UD0 394 aa12.3□□□□□ -0.44
PRKCH-203ENST00000552875 GPC2Q8N158 579 aa12.3□□□□□ -0.44
PRKCH-203ENST00000552875 BRIP1Q9BX63 1249 aa12.3□□□□□ -0.44
PRKCH-203ENST00000552875 SAGE1Q9NXZ1 904 aa12.3□□□□□ -0.44
PRKCH-203ENST00000552875 DICER1Q9UPY3 1922 aaKnown RBP12.29□□□□□ -0.44
PRKCH-203ENST00000552875 DLEC1Q9Y238 1755 aa12.29□□□□□ -0.44
PRKCH-203ENST00000552875 FXR1P51114 621 aaKnown RBP eCLIP12.29□□□□□ -0.44
PRKCH-203ENST00000552875 CABP4P57796 275 aa12.29□□□□□ -0.44
PRKCH-203ENST00000552875 CST9Q5W186 159 aa12.29□□□□□ -0.44
PRKCH-203ENST00000552875 NARFQ9UHQ1 456 aa12.29□□□□□ -0.44
PRKCH-203ENST00000552875 PKN2Q16513 984 aaKnown RBP12.28□□□□□ -0.44
PRKCH-203ENST00000552875 CTU1Q7Z7A3 348 aaKnown RBP12.28□□□□□ -0.44
PRKCH-203ENST00000552875 SLC17A8Q8NDX2 589 aa12.28□□□□□ -0.44
PRKCH-203ENST00000552875 ZNF541Q9H0D2 1346 aa12.28□□□□□ -0.44
PRKCH-203ENST00000552875 COL5A3P25940 1745 aaPredicted RBP12.28□□□□□ -0.44
PRKCH-203ENST00000552875 ADAMTSL1Q8N6G6 1762 aa12.28□□□□□ -0.44
PRKCH-203ENST00000552875 CASP8AP2Q9UKL3 1982 aa12.27□□□□□ -0.44
PRKCH-203ENST00000552875 NPHP1O15259 732 aa12.27□□□□□ -0.45
PRKCH-203ENST00000552875 CCDC93Q567U6 631 aa12.27□□□□□ -0.45
PRKCH-203ENST00000552875 PUS7Q96PZ0 661 aaKnown RBP12.27□□□□□ -0.45
PRKCH-203ENST00000552875 TONSLQ96HA7 1378 aa12.27□□□□□ -0.45
PRKCH-203ENST00000552875 CELF2O95319 508 aaKnown RBP12.26□□□□□ -0.45
PRKCH-203ENST00000552875 STYK1Q6J9G0 422 aa12.26□□□□□ -0.45
PRKCH-203ENST00000552875 PRPF40BQ6NWY9 871 aaKnown RBP12.26□□□□□ -0.45
PRKCH-203ENST00000552875 INTS5Q6P9B9 1019 aaKnown RBP12.26□□□□□ -0.45
PRKCH-203ENST00000552875 USP50Q70EL3 339 aaPredicted RBP12.26□□□□□ -0.45
PRKCH-203ENST00000552875 HPS5Q9UPZ3 1129 aa12.26□□□□□ -0.45
PRKCH-203ENST00000552875 FKBP4Q02790 459 aaKnown RBP eCLIP12.25□□□□□ -0.45
PRKCH-203ENST00000552875 JDP2Q8WYK2 163 aa12.25□□□□□ -0.45
PRKCH-203ENST00000552875 FER1L6Q2WGJ9 1857 aa12.25□□□□□ -0.45
PRKCH-203ENST00000552875 FZD9O00144 591 aa12.24□□□□□ -0.45
PRKCH-203ENST00000552875 TRAF5O00463 557 aa12.24□□□□□ -0.45
PRKCH-203ENST00000552875 EIF6P56537 245 aaKnown RBP12.24□□□□□ -0.45
PRKCH-203ENST00000552875 SOS1Q07889 1333 aaPredicted RBP12.24□□□□□ -0.45
PRKCH-203ENST00000552875 WASHC2AQ641Q2 1341 aa12.24□□□□□ -0.45
PRKCH-203ENST00000552875 RTKN2Q8IZC4 609 aa12.24□□□□□ -0.45
PRKCH-203ENST00000552875 CARMIL3Q8ND23 1372 aa12.24□□□□□ -0.45
PRKCH-203ENST00000552875 MASTLQ96GX5 879 aa12.24□□□□□ -0.45
PRKCH-203ENST00000552875 COL15A1P39059 1388 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms