RNA–Protein interactions for RNA: ENST00000552685.1

LINC00661-207, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-207ENST00000552685 POLRMTO00411 1230 aaKnown RBP13.39□□□□□ -0.27
LINC00661-207ENST00000552685 ZPR1O75312 459 aa13.38□□□□□ -0.27
LINC00661-207ENST00000552685 TM4SF1P30408 202 aa13.38□□□□□ -0.27
LINC00661-207ENST00000552685 HTRA3P83110 453 aa13.38□□□□□ -0.27
LINC00661-207ENST00000552685 WDR90Q96KV7 1748 aa13.38□□□□□ -0.27
LINC00661-207ENST00000552685 COL15A1P39059 1388 aa13.37□□□□□ -0.27
LINC00661-207ENST00000552685 CANXP27824 592 aaKnown RBP13.37□□□□□ -0.27
LINC00661-207ENST00000552685 PIM2Q9P1W9 311 aa13.37□□□□□ -0.27
LINC00661-207ENST00000552685 PCNTO95613 3336 aa13.37□□□□□ -0.27
LINC00661-207ENST00000552685 AFDNP55196 1824 aaKnown RBP13.36□□□□□ -0.27
LINC00661-207ENST00000552685 UBR2Q8IWV8 1755 aa13.36□□□□□ -0.27
LINC00661-207ENST00000552685 PRELPP51888 382 aa13.36□□□□□ -0.27
LINC00661-207ENST00000552685 NFIXQ14938 502 aa13.36□□□□□ -0.27
LINC00661-207ENST00000552685 DALRD3Q5D0E6 543 aaKnown RBP13.36□□□□□ -0.27
LINC00661-207ENST00000552685 C9orf131Q5VYM1 1079 aa13.36□□□□□ -0.27
LINC00661-207ENST00000552685 IL17REQ8NFR9 667 aa13.36□□□□□ -0.27
LINC00661-207ENST00000552685 BCL2L12Q9HB09 334 aa13.36□□□□□ -0.27
LINC00661-207ENST00000552685 NARFQ9UHQ1 456 aa13.36□□□□□ -0.27
LINC00661-207ENST00000552685 SBF1O95248 1867 aa13.35□□□□□ -0.27
LINC00661-207ENST00000552685 NPC1L1Q9UHC9 1359 aa13.34□□□□□ -0.27
LINC00661-207ENST00000552685 NRXN2Q9P2S2 1712 aa13.34□□□□□ -0.27
LINC00661-207ENST00000552685 TOMM70O94826 608 aa13.34□□□□□ -0.27
LINC00661-207ENST00000552685 BICDL1Q6ZP65 573 aa13.34□□□□□ -0.27
LINC00661-207ENST00000552685 TTC5Q8N0Z6 440 aa13.34□□□□□ -0.27
LINC00661-207ENST00000552685 ZNF496Q96IT1 587 aaPredicted RBP13.34□□□□□ -0.27
LINC00661-207ENST00000552685 PHACTR3Q96KR7 559 aa13.34□□□□□ -0.27
LINC00661-207ENST00000552685 GNAT3A8MTJ3 354 aa13.33□□□□□ -0.28
LINC00661-207ENST00000552685 KCNQ3O43525 872 aa13.33□□□□□ -0.28
LINC00661-207ENST00000552685 APLP1P51693 650 aa13.33□□□□□ -0.28
LINC00661-207ENST00000552685 TEFQ10587 303 aa13.33□□□□□ -0.28
LINC00661-207ENST00000552685 VSIG10Q8N0Z9 540 aa13.33□□□□□ -0.28
LINC00661-207ENST00000552685 GAS2L2Q8NHY3 880 aa13.33□□□□□ -0.28
LINC00661-207ENST00000552685 ZNF330Q9Y3S2 320 aaPredicted RBP13.33□□□□□ -0.28
LINC00661-207ENST00000552685 CARMIL3Q8ND23 1372 aa13.32□□□□□ -0.28
LINC00661-207ENST00000552685 SIPA1L3O60292 1781 aaPredicted RBP13.32□□□□□ -0.28
LINC00661-207ENST00000552685 SERPINB2P05120 415 aa13.32□□□□□ -0.28
LINC00661-207ENST00000552685 PRKAR2BP31323 418 aa13.32□□□□□ -0.28
LINC00661-207ENST00000552685 RASSF7Q02833 373 aa13.32□□□□□ -0.28
LINC00661-207ENST00000552685 ZNF790Q6PG37 636 aa13.32□□□□□ -0.28
LINC00661-207ENST00000552685 CCDC24Q8N4L8 307 aa13.32□□□□□ -0.28
LINC00661-207ENST00000552685 RNF181Q9P0P0 153 aa13.32□□□□□ -0.28
LINC00661-207ENST00000552685 HEG1Q9ULI3 1381 aa13.32□□□□□ -0.28
LINC00661-207ENST00000552685 DLEC1Q9Y238 1755 aa13.31□□□□□ -0.28
LINC00661-207ENST00000552685 STARD3NLO95772 234 aa13.31□□□□□ -0.28
LINC00661-207ENST00000552685 EIF5P55010 431 aaKnown RBP13.31□□□□□ -0.28
LINC00661-207ENST00000552685 RSPH6AQ9H0K4 717 aa13.31□□□□□ -0.28
LINC00661-207ENST00000552685 TBC1D2BQ9UPU7 963 aa13.31□□□□□ -0.28
LINC00661-207ENST00000552685 A1BGP04217 495 aa13.3□□□□□ -0.28
LINC00661-207ENST00000552685 PIP4K2AP48426 406 aaPredicted RBP13.3□□□□□ -0.28
LINC00661-207ENST00000552685 TBC1D9BQ66K14 1250 aa13.3□□□□□ -0.28
LINC00661-207ENST00000552685 C2CD5Q86YS7 1000 aa13.3□□□□□ -0.28
LINC00661-207ENST00000552685 RBM46Q8TBY0 533 aaKnown RBP13.3□□□□□ -0.28
LINC00661-207ENST00000552685 TNRC6CQ9HCJ0 1690 aaKnown RBP13.3□□□□□ -0.28
LINC00661-207ENST00000552685 CFAP53Q96M91 514 aa13.29□□□□□ -0.28
LINC00661-207ENST00000552685 PRAMEF22A3QJZ6 481 aa13.28□□□□□ -0.28
LINC00661-207ENST00000552685 BTBD11A6QL63 1104 aa13.28□□□□□ -0.28
LINC00661-207ENST00000552685 U2AF1L5P0DN76 240 aaPredicted RBP13.28□□□□□ -0.28
LINC00661-207ENST00000552685 PPP2R1AP30153 589 aa13.28□□□□□ -0.28
LINC00661-207ENST00000552685 U2AF1Q01081 240 aaKnown RBP eCLIP13.28□□□□□ -0.28
LINC00661-207ENST00000552685 MCM10Q7L590 875 aa13.28□□□□□ -0.28
LINC00661-207ENST00000552685 JMYQ8N9B5 988 aa13.28□□□□□ -0.28
LINC00661-207ENST00000552685 FMNL2Q96PY5 1086 aa13.28□□□□□ -0.28
LINC00661-207ENST00000552685 CEMIPQ8WUJ3 1361 aa13.28□□□□□ -0.28
LINC00661-207ENST00000552685 SCN7AQ01118 1682 aa13.28□□□□□ -0.28
LINC00661-207ENST00000552685 ANKRD31Q8N7Z5 1873 aa13.27□□□□□ -0.28
LINC00661-207ENST00000552685 A0A087WZG4 1122 aa13.27□□□□□ -0.29
LINC00661-207ENST00000552685 DCTN1Q14203 1278 aa13.27□□□□□ -0.29
LINC00661-207ENST00000552685 COL13A1Q5TAT6 717 aaPredicted RBP13.27□□□□□ -0.29
LINC00661-207ENST00000552685 TTLL6Q8N841 843 aa13.27□□□□□ -0.29
LINC00661-207ENST00000552685 RRAGCQ9HB90 399 aa13.27□□□□□ -0.29
LINC00661-207ENST00000552685 ZNF219Q9P2Y4 722 aaPredicted RBP13.27□□□□□ -0.29
LINC00661-207ENST00000552685 COL11A2P13942 1736 aaPredicted RBP13.27□□□□□ -0.29
LINC00661-207ENST00000552685 TIAM2Q8IVF5 1701 aa13.27□□□□□ -0.29
LINC00661-207ENST00000552685 KLRG1Q96E93 195 aa13.26□□□□□ -0.29
LINC00661-207ENST00000552685 USP16Q9Y5T5 823 aa13.26□□□□□ -0.29
LINC00661-207ENST00000552685 CCDC88AQ3V6T2 1871 aa13.25□□□□□ -0.29
LINC00661-207ENST00000552685 H0YIN7 160 aa13.25□□□□□ -0.29
LINC00661-207ENST00000552685 CAMTA2O94983 1202 aa13.25□□□□□ -0.29
LINC00661-207ENST00000552685 IL6STP40189 918 aaPredicted RBP13.25□□□□□ -0.29
LINC00661-207ENST00000552685 PRR5LQ6MZQ0 368 aa13.25□□□□□ -0.29
LINC00661-207ENST00000552685 C16orf71Q8IYS4 520 aaPredicted RBP13.25□□□□□ -0.29
LINC00661-207ENST00000552685 ZNF622Q969S3 477 aaKnown RBP eCLIP13.25□□□□□ -0.29
LINC00661-207ENST00000552685 TEX13AQ9BXU3 409 aaPredicted RBP13.25□□□□□ -0.29
LINC00661-207ENST00000552685 NUDCQ9Y266 331 aa13.25□□□□□ -0.29
LINC00661-207ENST00000552685 KDM2BQ8NHM5 1336 aa13.24□□□□□ -0.29
LINC00661-207ENST00000552685 POTECB2RU33 542 aa13.24□□□□□ -0.29
LINC00661-207ENST00000552685 NFKBIEO00221 500 aa13.24□□□□□ -0.29
LINC00661-207ENST00000552685 LMNB1P20700 586 aa13.23□□□□□ -0.29
LINC00661-207ENST00000552685 FSTL1Q12841 308 aa13.23□□□□□ -0.29
LINC00661-207ENST00000552685 DZIP3Q86Y13 1208 aaKnown RBP13.23□□□□□ -0.29
LINC00661-207ENST00000552685 RTF1Q92541 710 aaKnown RBP13.23□□□□□ -0.29
LINC00661-207ENST00000552685 MIS18AQ9NYP9 233 aa13.23□□□□□ -0.29
LINC00661-207ENST00000552685 BCORQ6W2J9 1755 aa13.22□□□□□ -0.29
LINC00661-207ENST00000552685 C21orf2O43822 256 aa13.22□□□□□ -0.29
LINC00661-207ENST00000552685 NPM2Q86SE8 214 aaKnown RBP13.22□□□□□ -0.29
LINC00661-207ENST00000552685 SETDB2Q96T68 719 aa13.22□□□□□ -0.29
LINC00661-207ENST00000552685 BRIP1Q9BX63 1249 aa13.22□□□□□ -0.29
LINC00661-207ENST00000552685 CACNA1SQ13698 1873 aa13.22□□□□□ -0.29
LINC00661-207ENST00000552685 NPHP1O15259 732 aa13.21□□□□□ -0.29
LINC00661-207ENST00000552685 CNBD1Q8NA66 436 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms