RNA–Protein interactions for RNA: ENST00000552674.5

SMARCC2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,730 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-214ENST00000552674 MTHFSDQ2M296 383 aaKnown RBP11.25□□□□□ -0.61
SMARCC2-214ENST00000552674 FAM173BQ6P4H8 233 aa11.25□□□□□ -0.61
SMARCC2-214ENST00000552674 RHPN1Q8TCX5 695 aa11.25□□□□□ -0.61
SMARCC2-214ENST00000552674 RNF17Q9BXT8 1623 aaKnown RBP11.25□□□□□ -0.61
SMARCC2-214ENST00000552674 ASXL2Q76L83 1435 aa11.25□□□□□ -0.61
SMARCC2-214ENST00000552674 CLEC17AQ6ZS10 378 aa11.25□□□□□ -0.61
SMARCC2-214ENST00000552674 CCDC186Q7Z3E2 898 aa11.25□□□□□ -0.61
SMARCC2-214ENST00000552674 USHBP1Q8N6Y0 703 aa11.25□□□□□ -0.61
SMARCC2-214ENST00000552674 PIBF1Q8WXW3 757 aa11.25□□□□□ -0.61
SMARCC2-214ENST00000552674 SLC26A8Q96RN1 970 aa11.25□□□□□ -0.61
SMARCC2-214ENST00000552674 CHMP4AQ9BY43 222 aa11.25□□□□□ -0.61
SMARCC2-214ENST00000552674 GNAT3A8MTJ3 354 aa11.24□□□□□ -0.61
SMARCC2-214ENST00000552674 CCDC73Q6ZRK6 1079 aa11.24□□□□□ -0.61
SMARCC2-214ENST00000552674 UNC5CLQ8IV45 518 aa11.24□□□□□ -0.61
SMARCC2-214ENST00000552674 PDLIM2Q96JY6 352 aa11.24□□□□□ -0.61
SMARCC2-214ENST00000552674 ZSCAN31Q96LW9 406 aaPredicted RBP11.24□□□□□ -0.61
SMARCC2-214ENST00000552674 KIF1BO60333 1816 aa11.24□□□□□ -0.61
SMARCC2-214ENST00000552674 GLRX3O76003 335 aaKnown RBP11.24□□□□□ -0.61
SMARCC2-214ENST00000552674 ZNF853P0CG23 659 aa11.24□□□□□ -0.61
SMARCC2-214ENST00000552674 TNNT1P13805 278 aa11.24□□□□□ -0.61
SMARCC2-214ENST00000552674 PTGS1P23219 599 aa11.24□□□□□ -0.61
SMARCC2-214ENST00000552674 CYB5RLQ6IPT4 315 aa11.24□□□□□ -0.61
SMARCC2-214ENST00000552674 PODXL2Q9NZ53 605 aa11.24□□□□□ -0.61
SMARCC2-214ENST00000552674 HOMER1Q86YM7 354 aa11.24□□□□□ -0.61
SMARCC2-214ENST00000552674 SDF4Q9BRK5 362 aa11.24□□□□□ -0.61
SMARCC2-214ENST00000552674 CYP2E1P05181 493 aaPredicted RBP11.23□□□□□ -0.61
SMARCC2-214ENST00000552674 GNL2Q13823 731 aaKnown RBP11.23□□□□□ -0.61
SMARCC2-214ENST00000552674 ZFYVE16Q7Z3T8 1539 aa11.23□□□□□ -0.61
SMARCC2-214ENST00000552674 PPFIA3O75145 1194 aa11.23□□□□□ -0.61
SMARCC2-214ENST00000552674 LUZP1Q86V48 1076 aa11.23□□□□□ -0.61
SMARCC2-214ENST00000552674 TET3O43151 1660 aa11.23□□□□□ -0.61
SMARCC2-214ENST00000552674 CCDC8Q9H0W5 538 aaPredicted RBP11.23□□□□□ -0.61
SMARCC2-214ENST00000552674 BOLA2Q9H3K6 86 aa11.23□□□□□ -0.61
SMARCC2-214ENST00000552674 GORABQ5T7V8 394 aa11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 TRMT1Q9NXH9 659 aaKnown RBP11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 DACT1Q9NYF0 836 aa11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 PPP6R1Q9UPN7 881 aa11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 CEP152O94986 1710 aa11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 ACEP12821 1306 aa11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 SMAP1Q8IYB5 467 aaPredicted RBP11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 ABTB2Q8N961 1025 aa11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 PI4KAP2A4QPH2 592 aa11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 RIOK3O14730 519 aaKnown RBP11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 KINO60870 393 aaKnown RBP11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 ZNF165P49910 485 aa11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 C1orf141Q5JVX7 400 aa11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 OSCARQ8IYS5 282 aa11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 PI4KAP1Q8N8J0 262 aa11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 DNAJC2Q99543 621 aaKnown RBP11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 SH2B1Q9NRF2 756 aaPredicted RBP11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 CLIP2Q9UDT6 1046 aa11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 EID1Q9Y6B2 187 aa11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 PTCH1Q13635 1447 aa11.22□□□□□ -0.61
SMARCC2-214ENST00000552674 TPM4P67936 248 aa11.21□□□□□ -0.61
SMARCC2-214ENST00000552674 ANO6Q4KMQ2 910 aa11.21□□□□□ -0.61
SMARCC2-214ENST00000552674 SNX14Q9Y5W7 946 aa11.21□□□□□ -0.61
SMARCC2-214ENST00000552674 U2AF2P26368 475 aaKnown RBP eCLIP11.21□□□□□ -0.616e-9■■■■□ 23
SMARCC2-214ENST00000552674 FAM69CQ0P6D2 419 aa11.21□□□□□ -0.61
SMARCC2-214ENST00000552674 PHAXQ9H814 394 aaKnown RBP11.21□□□□□ -0.61
SMARCC2-214ENST00000552674 FAM200AQ8TCP9 573 aa11.21□□□□□ -0.62
SMARCC2-214ENST00000552674 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.21□□□□□ -0.62
SMARCC2-214ENST00000552674 V9GYY5 206 aaPredicted RBP11.21□□□□□ -0.62
SMARCC2-214ENST00000552674 TTC21BQ7Z4L5 1316 aa11.21□□□□□ -0.62
SMARCC2-214ENST00000552674 RIC3Q7Z5B4 369 aa11.2□□□□□ -0.62
SMARCC2-214ENST00000552674 CCAR2Q8N163 923 aaKnown RBP11.2□□□□□ -0.62
SMARCC2-214ENST00000552674 BCL2L12Q9HB09 334 aa11.2□□□□□ -0.62
SMARCC2-214ENST00000552674 FAM135BQ49AJ0 1406 aa11.2□□□□□ -0.62
SMARCC2-214ENST00000552674 SMC2O95347 1197 aa11.2□□□□□ -0.62
SMARCC2-214ENST00000552674 ME1P48163 572 aa11.2□□□□□ -0.62
SMARCC2-214ENST00000552674 TYRO3Q06418 890 aa11.2□□□□□ -0.62
SMARCC2-214ENST00000552674 NEXNQ0ZGT2 675 aa11.2□□□□□ -0.62
SMARCC2-214ENST00000552674 SCAND2PQ9GZW5 306 aaPredicted RBP11.2□□□□□ -0.62
SMARCC2-214ENST00000552674 DNAAF4Q8WXU2 420 aa11.2□□□□□ -0.62
SMARCC2-214ENST00000552674 ECHDC1Q9NTX5 307 aa11.2□□□□□ -0.62
SMARCC2-214ENST00000552674 ZNF330Q9Y3S2 320 aaPredicted RBP11.2□□□□□ -0.62
SMARCC2-214ENST00000552674 UHRF1BP1LA0JNW5 1464 aa11.2□□□□□ -0.62
SMARCC2-214ENST00000552674 HSPA4P34932 840 aa11.19□□□□□ -0.62
SMARCC2-214ENST00000552674 CUL4AQ13619 759 aa11.19□□□□□ -0.62
SMARCC2-214ENST00000552674 DNAJC25Q9H1X3 360 aa11.19□□□□□ -0.62
SMARCC2-214ENST00000552674 PA2G4Q9UQ80 394 aaKnown RBP11.19□□□□□ -0.62
SMARCC2-214ENST00000552674 SOS1Q07889 1333 aaPredicted RBP11.19□□□□□ -0.62
SMARCC2-214ENST00000552674 ERICH4A6NGS2 130 aa11.19□□□□□ -0.62
SMARCC2-214ENST00000552674 ANKRD1Q15327 319 aa11.19□□□□□ -0.62
SMARCC2-214ENST00000552674 NEUROD6Q96NK8 337 aa11.19□□□□□ -0.62
SMARCC2-214ENST00000552674 PIK3R4Q99570 1358 aa11.19□□□□□ -0.62
SMARCC2-214ENST00000552674 SGSM2O43147 1006 aa11.19□□□□□ -0.62
SMARCC2-214ENST00000552674 PTPN14Q15678 1187 aa11.19□□□□□ -0.62
SMARCC2-214ENST00000552674 RASEFQ8IZ41 740 aa11.19□□□□□ -0.62
SMARCC2-214ENST00000552674 CGNQ9P2M7 1197 aaKnown RBP11.19□□□□□ -0.62
SMARCC2-214ENST00000552674 RBM8AQ9Y5S9 174 aaKnown RBP11.19□□□□□ -0.62
SMARCC2-214ENST00000552674 POGZQ7Z3K3 1410 aa11.18□□□□□ -0.62
SMARCC2-214ENST00000552674 MYOM1P52179 1685 aa11.18□□□□□ -0.62
SMARCC2-214ENST00000552674 DDX58O95786 925 aaKnown RBP11.18□□□□□ -0.62
SMARCC2-214ENST00000552674 GUCY1B3Q02153 619 aa11.18□□□□□ -0.62
SMARCC2-214ENST00000552674 ERC1Q8IUD2 1116 aa11.18□□□□□ -0.62
SMARCC2-214ENST00000552674 PYCARDQ9ULZ3 195 aa11.18□□□□□ -0.62
SMARCC2-214ENST00000552674 QRICH2Q9H0J4 1663 aa11.18□□□□□ -0.62
SMARCC2-214ENST00000552674 HIP1O00291 1037 aa11.18□□□□□ -0.62
SMARCC2-214ENST00000552674 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.18□□□□□ -0.62
SMARCC2-214ENST00000552674 KIF24Q5T7B8 1368 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms