RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 EIF4G2P78344 907 aaKnown RBP eCLIP6.12□□□□□ -1.43
TMEM106C-220ENST00000552561 AMOTQ4VCS5 1084 aa6.12□□□□□ -1.43
TMEM106C-220ENST00000552561 SMC1BQ8NDV3 1235 aa6.12□□□□□ -1.43
TMEM106C-220ENST00000552561 DCAF5Q96JK2 942 aa6.12□□□□□ -1.43
TMEM106C-220ENST00000552561 CNTNAP4Q9C0A0 1308 aa6.12□□□□□ -1.43
TMEM106C-220ENST00000552561 PRDM10Q9NQV6 1147 aa6.12□□□□□ -1.43
TMEM106C-220ENST00000552561 ATG3Q9NT62 314 aa6.12□□□□□ -1.43
TMEM106C-220ENST00000552561 NPC1L1Q9UHC9 1359 aa6.12□□□□□ -1.43
TMEM106C-220ENST00000552561 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.11□□□□□ -1.43
TMEM106C-220ENST00000552561 ATMINO43313 823 aaPredicted RBP6.11□□□□□ -1.43
TMEM106C-220ENST00000552561 KCNQ4P56696 695 aa6.11□□□□□ -1.43
TMEM106C-220ENST00000552561 ITPK1Q13572 414 aa6.11□□□□□ -1.43
TMEM106C-220ENST00000552561 MPRIPQ6WCQ1 1025 aa6.11□□□□□ -1.43
TMEM106C-220ENST00000552561 SLC4A9Q96Q91 983 aa6.11□□□□□ -1.43
TMEM106C-220ENST00000552561 TSPYL2Q9H2G4 693 aaPredicted RBP6.11□□□□□ -1.43
TMEM106C-220ENST00000552561 METRNQ9UJH8 293 aa6.11□□□□□ -1.43
TMEM106C-220ENST00000552561 MYH14Q7Z406 1995 aaKnown RBP6.11□□□□□ -1.43
TMEM106C-220ENST00000552561 BRCA1P38398 1863 aaKnown RBP6.11□□□□□ -1.43
TMEM106C-220ENST00000552561 C10orf71Q711Q0 1435 aa6.1□□□□□ -1.43
TMEM106C-220ENST00000552561 PER1O15534 1290 aaPredicted RBP6.1□□□□□ -1.43
TMEM106C-220ENST00000552561 CTCFP49711 727 aaPredicted RBP6.1□□□□□ -1.43
TMEM106C-220ENST00000552561 TGFB2P61812 414 aa6.1□□□□□ -1.43
TMEM106C-220ENST00000552561 HTRA3P83110 453 aa6.1□□□□□ -1.43
TMEM106C-220ENST00000552561 AMER1Q5JTC6 1135 aaPredicted RBP6.1□□□□□ -1.43
TMEM106C-220ENST00000552561 LINC00116Q8NCU8 138 aa6.1□□□□□ -1.43
TMEM106C-220ENST00000552561 SLC39A7Q92504 469 aa6.1□□□□□ -1.43
TMEM106C-220ENST00000552561 CFAP44Q96MT7 982 aa6.1□□□□□ -1.43
TMEM106C-220ENST00000552561 TMOD3Q9NYL9 352 aa6.1□□□□□ -1.43
TMEM106C-220ENST00000552561 ASAP1Q9ULH1 1129 aa6.1□□□□□ -1.43
TMEM106C-220ENST00000552561 PXDNLA1KZ92 1463 aa6.09□□□□□ -1.43
TMEM106C-220ENST00000552561 SCN11AQ9UI33 1791 aa6.09□□□□□ -1.43
TMEM106C-220ENST00000552561 RPS6KA4O75676 772 aa6.09□□□□□ -1.43
TMEM106C-220ENST00000552561 HSPA5P11021 654 aaKnown RBP6.09□□□□□ -1.43
TMEM106C-220ENST00000552561 IL13P35225 146 aa6.09□□□□□ -1.43
TMEM106C-220ENST00000552561 MMRN1Q13201 1228 aa6.09□□□□□ -1.43
TMEM106C-220ENST00000552561 PLEKHO1Q53GL0 409 aaPredicted RBP6.09□□□□□ -1.43
TMEM106C-220ENST00000552561 NLGN1Q8N2Q7 840 aa6.09□□□□□ -1.43
TMEM106C-220ENST00000552561 AK7Q96M32 723 aa6.09□□□□□ -1.43
TMEM106C-220ENST00000552561 PANK3Q9H999 370 aa6.09□□□□□ -1.43
TMEM106C-220ENST00000552561 C4AP0C0L4 1744 aa6.08□□□□□ -1.44
TMEM106C-220ENST00000552561 CCDC85CA6NKD9 419 aa6.08□□□□□ -1.44
TMEM106C-220ENST00000552561 C7P10643 843 aa6.08□□□□□ -1.44
TMEM106C-220ENST00000552561 GYS1P13807 737 aa6.08□□□□□ -1.44
TMEM106C-220ENST00000552561 ATP6V1AP38606 617 aa6.08□□□□□ -1.44
TMEM106C-220ENST00000552561 ABHD8Q96I13 439 aa6.08□□□□□ -1.44
TMEM106C-220ENST00000552561 NMRK2Q9NPI5 230 aa6.08□□□□□ -1.44
TMEM106C-220ENST00000552561 ARFGEF1Q9Y6D6 1849 aa6.08□□□□□ -1.44
TMEM106C-220ENST00000552561 TJP1Q07157 1748 aa6.08□□□□□ -1.44
TMEM106C-220ENST00000552561 NRXN2Q9P2S2 1712 aa6.08□□□□□ -1.44
TMEM106C-220ENST00000552561 AKAP4Q5JQC9 854 aa6.07□□□□□ -1.44
TMEM106C-220ENST00000552561 TRAPPC3LQ5T215 181 aa6.07□□□□□ -1.44
TMEM106C-220ENST00000552561 RTCBQ9Y3I0 505 aaKnown RBP6.07□□□□□ -1.44
TMEM106C-220ENST00000552561 UBR2Q8IWV8 1755 aa6.07□□□□□ -1.44
TMEM106C-220ENST00000552561 COL3A1P02461 1466 aaPredicted RBP6.07□□□□□ -1.44
TMEM106C-220ENST00000552561 USP42Q9H9J4 1324 aaKnown RBP6.06□□□□□ -1.44
TMEM106C-220ENST00000552561 KCPQ6ZWJ8 1503 aa6.06□□□□□ -1.44
TMEM106C-220ENST00000552561 GNPATO15228 680 aa6.06□□□□□ -1.44
TMEM106C-220ENST00000552561 PPM1GO15355 546 aaPredicted RBP6.06□□□□□ -1.44
TMEM106C-220ENST00000552561 MMP10P09238 476 aa6.06□□□□□ -1.44
TMEM106C-220ENST00000552561 KCNA3P22001 575 aa6.06□□□□□ -1.44
TMEM106C-220ENST00000552561 ATN1P54259 1190 aaPredicted RBP6.06□□□□□ -1.44
TMEM106C-220ENST00000552561 MSL1Q68DK7 614 aa6.06□□□□□ -1.44
TMEM106C-220ENST00000552561 VSIG10Q8N0Z9 540 aa6.06□□□□□ -1.44
TMEM106C-220ENST00000552561 CCER1Q8TC90 406 aaPredicted RBP6.06□□□□□ -1.44
TMEM106C-220ENST00000552561 ARHGEF1Q92888 912 aaKnown RBP6.06□□□□□ -1.44
TMEM106C-220ENST00000552561 KIF12Q96FN5 646 aa6.06□□□□□ -1.44
TMEM106C-220ENST00000552561 KIF7Q2M1P5 1343 aa6.05□□□□□ -1.44
TMEM106C-220ENST00000552561 ZC3H4Q9UPT8 1303 aaKnown RBP6.05□□□□□ -1.44
TMEM106C-220ENST00000552561 RGL2O15211 777 aa6.05□□□□□ -1.44
TMEM106C-220ENST00000552561 TM4SF1P30408 202 aa6.05□□□□□ -1.44
TMEM106C-220ENST00000552561 MTHFSP49914 203 aa6.05□□□□□ -1.44
TMEM106C-220ENST00000552561 ZNF530Q6P9A1 599 aaPredicted RBP6.05□□□□□ -1.44
TMEM106C-220ENST00000552561 INTS5Q6P9B9 1019 aaKnown RBP6.05□□□□□ -1.44
TMEM106C-220ENST00000552561 MORC1Q86VD1 984 aa6.05□□□□□ -1.44
TMEM106C-220ENST00000552561 GCC1Q96CN9 775 aa6.05□□□□□ -1.44
TMEM106C-220ENST00000552561 SLC52A2Q9HAB3 445 aa6.05□□□□□ -1.44
TMEM106C-220ENST00000552561 KNSTRNQ9Y448 316 aa6.05□□□□□ -1.44
TMEM106C-220ENST00000552561 CUL9Q8IWT3 2517 aa6.04□□□□□ -1.44
TMEM106C-220ENST00000552561 SOS1Q07889 1333 aaPredicted RBP6.04□□□□□ -1.44
TMEM106C-220ENST00000552561 SIPA1L3O60292 1781 aaPredicted RBP6.04□□□□□ -1.44
TMEM106C-220ENST00000552561 DLEC1Q9Y238 1755 aa6.04□□□□□ -1.44
TMEM106C-220ENST00000552561 FOXN1O15353 648 aa6.04□□□□□ -1.44
TMEM106C-220ENST00000552561 CRKLP46109 303 aaKnown RBP6.04□□□□□ -1.44
TMEM106C-220ENST00000552561 CABP4P57796 275 aa6.04□□□□□ -1.44
TMEM106C-220ENST00000552561 C1orf141Q5JVX7 400 aa6.04□□□□□ -1.44
TMEM106C-220ENST00000552561 SULT6B1Q6IMI4 303 aa6.04□□□□□ -1.44
TMEM106C-220ENST00000552561 AEBP1Q8IUX7 1158 aa6.04□□□□□ -1.44
TMEM106C-220ENST00000552561 NFATC2IPQ8NCF5 419 aa6.04□□□□□ -1.44
TMEM106C-220ENST00000552561 BEGAINQ9BUH8 593 aa6.04□□□□□ -1.44
TMEM106C-220ENST00000552561 CEMIPQ8WUJ3 1361 aa6.04□□□□□ -1.44
TMEM106C-220ENST00000552561 VIRMAQ69YN4 1812 aaKnown RBP6.04□□□□□ -1.44
TMEM106C-220ENST00000552561 POLRMTO00411 1230 aaKnown RBP6.03□□□□□ -1.44
TMEM106C-220ENST00000552561 RNMTO43148 476 aaKnown RBP6.03□□□□□ -1.44
TMEM106C-220ENST00000552561 PHF14O94880 888 aa6.03□□□□□ -1.44
TMEM106C-220ENST00000552561 CYP19A1P11511 503 aaPredicted RBP6.03□□□□□ -1.44
TMEM106C-220ENST00000552561 ZEB1P37275 1124 aaPredicted RBP6.03□□□□□ -1.44
TMEM106C-220ENST00000552561 RGS19P49795 217 aa6.03□□□□□ -1.44
TMEM106C-220ENST00000552561 PRPF38BQ5VTL8 546 aaKnown RBP6.03□□□□□ -1.44
TMEM106C-220ENST00000552561 SMIM5Q71RC9 77 aa6.03□□□□□ -1.44
TMEM106C-220ENST00000552561 SPNS2Q8IVW8 549 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms