RNA–Protein interactions for RNA: ENST00000552548.5

PFDN5-217, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-217ENST00000552548 CCNL1Q9UK58 526 aaPredicted RBP9.19□□□□□ -0.94
PFDN5-217ENST00000552548 ZBTB1Q9Y2K1 713 aa9.19□□□□□ -0.94
PFDN5-217ENST00000552548 CYP19A1P11511 503 aaPredicted RBP9.18□□□□□ -0.94
PFDN5-217ENST00000552548 MYL6BP14649 208 aa9.18□□□□□ -0.94
PFDN5-217ENST00000552548 CANXP27824 592 aaKnown RBP9.18□□□□□ -0.94
PFDN5-217ENST00000552548 NCBP3Q53F19 620 aaKnown RBP9.18□□□□□ -0.94
PFDN5-217ENST00000552548 TTLL7Q6ZT98 887 aa9.18□□□□□ -0.94
PFDN5-217ENST00000552548 UBR2Q8IWV8 1755 aa9.18□□□□□ -0.94
PFDN5-217ENST00000552548 TTC5Q8N0Z6 440 aa9.18□□□□□ -0.94
PFDN5-217ENST00000552548 PLEKHG2Q9H7P9 1386 aa9.18□□□□□ -0.94
PFDN5-217ENST00000552548 RARSP54136 660 aaKnown RBP9.17□□□□□ -0.94
PFDN5-217ENST00000552548 MRPL50Q8N5N7 158 aaKnown RBP9.17□□□□□ -0.94
PFDN5-217ENST00000552548 FMNL2Q96PY5 1086 aa9.17□□□□□ -0.94
PFDN5-217ENST00000552548 ZNF330Q9Y3S2 320 aaPredicted RBP9.17□□□□□ -0.94
PFDN5-217ENST00000552548 F6X3S4 739 aa9.16□□□□□ -0.94
PFDN5-217ENST00000552548 PHF14O94880 888 aa9.16□□□□□ -0.94
PFDN5-217ENST00000552548 CRKLP46109 303 aaKnown RBP9.16□□□□□ -0.94
PFDN5-217ENST00000552548 HDGFL1Q5TGJ6 251 aa9.16□□□□□ -0.94
PFDN5-217ENST00000552548 MYH16Q9H6N6 1097 aa9.16□□□□□ -0.94
PFDN5-217ENST00000552548 SRP68Q9UHB9 627 aaKnown RBP9.16□□□□□ -0.94
PFDN5-217ENST00000552548 EP400Q96L91 3159 aa9.16□□□□□ -0.94
PFDN5-217ENST00000552548 SNRPA1P09661 255 aaKnown RBP9.15□□□□□ -0.94
PFDN5-217ENST00000552548 RLBP1P12271 317 aa9.15□□□□□ -0.94
PFDN5-217ENST00000552548 AIMP1Q12904 312 aaKnown RBP9.15□□□□□ -0.94
PFDN5-217ENST00000552548 JARID2Q92833 1246 aaPredicted RBP9.15□□□□□ -0.94
PFDN5-217ENST00000552548 SUPT16HQ9Y5B9 1047 aaKnown RBP9.15□□□□□ -0.94
PFDN5-217ENST00000552548 MYH14Q7Z406 1995 aaKnown RBP9.15□□□□□ -0.95
PFDN5-217ENST00000552548 SLC4A2P04920 1241 aa9.14□□□□□ -0.95
PFDN5-217ENST00000552548 HLFQ16534 295 aa9.14□□□□□ -0.95
PFDN5-217ENST00000552548 XAGE3Q8WTP9 111 aa9.14□□□□□ -0.95
PFDN5-217ENST00000552548 AKT1S1Q96B36 256 aa9.14□□□□□ -0.95
PFDN5-217ENST00000552548 BCL2L12Q9HB09 334 aa9.14□□□□□ -0.95
PFDN5-217ENST00000552548 NOB1Q9ULX3 412 aaKnown RBP9.14□□□□□ -0.95
PFDN5-217ENST00000552548 TBC1D2BQ9UPU7 963 aa9.14□□□□□ -0.95
PFDN5-217ENST00000552548 LY75O60449 1722 aa9.14□□□□□ -0.95
PFDN5-217ENST00000552548 PSDA5PKW4 1024 aaPredicted RBP9.13□□□□□ -0.95
PFDN5-217ENST00000552548 PLSCR1O15162 318 aa9.13□□□□□ -0.95
PFDN5-217ENST00000552548 GNPATO15228 680 aa9.13□□□□□ -0.95
PFDN5-217ENST00000552548 CALD1Q05682 793 aaKnown RBP9.13□□□□□ -0.95
PFDN5-217ENST00000552548 COPS6Q7L5N1 327 aa9.13□□□□□ -0.95
PFDN5-217ENST00000552548 PANK1Q8TE04 598 aa9.13□□□□□ -0.95
PFDN5-217ENST00000552548 SMARCC1Q92922 1105 aaPredicted RBP9.13□□□□□ -0.95
PFDN5-217ENST00000552548 CLUAP1Q96AJ1 413 aa9.13□□□□□ -0.95
PFDN5-217ENST00000552548 CCDC87Q9NVE4 849 aa9.13□□□□□ -0.95
PFDN5-217ENST00000552548 BABAM1Q9NWV8 329 aa9.13□□□□□ -0.95
PFDN5-217ENST00000552548 RCAN3Q9UKA8 241 aa9.13□□□□□ -0.95
PFDN5-217ENST00000552548 COL23A1Q86Y22 540 aaPredicted RBP9.12□□□□□ -0.95
PFDN5-217ENST00000552548 SYNE4Q8N205 404 aa9.12□□□□□ -0.95
PFDN5-217ENST00000552548 CCDC24Q8N4L8 307 aa9.12□□□□□ -0.95
PFDN5-217ENST00000552548 FRAT1Q92837 279 aaPredicted RBP9.12□□□□□ -0.95
PFDN5-217ENST00000552548 ARXQ96QS3 562 aa9.12□□□□□ -0.95
PFDN5-217ENST00000552548 ZBTB3Q9H5J0 574 aa9.12□□□□□ -0.95
PFDN5-217ENST00000552548 SMC4Q9NTJ3 1288 aa9.12□□□□□ -0.95
PFDN5-217ENST00000552548 ADCY9O60503 1353 aa9.12□□□□□ -0.95
PFDN5-217ENST00000552548 COL5A3P25940 1745 aaPredicted RBP9.11□□□□□ -0.95
PFDN5-217ENST00000552548 SOS1Q07889 1333 aaPredicted RBP9.11□□□□□ -0.95
PFDN5-217ENST00000552548 PNPLA7Q6ZV29 1317 aa9.11□□□□□ -0.95
PFDN5-217ENST00000552548 EIF5P55010 431 aaKnown RBP9.11□□□□□ -0.95
PFDN5-217ENST00000552548 MSL1Q68DK7 614 aa9.11□□□□□ -0.95
PFDN5-217ENST00000552548 SLC51AQ86UW1 340 aa9.11□□□□□ -0.95
PFDN5-217ENST00000552548 VSIG10Q8N0Z9 540 aa9.11□□□□□ -0.95
PFDN5-217ENST00000552548 ARHGEF1Q92888 912 aaKnown RBP9.11□□□□□ -0.95
PFDN5-217ENST00000552548 C4BP0C0L5 1744 aa9.11□□□□□ -0.95
PFDN5-217ENST00000552548 NUP188Q5SRE5 1749 aa9.11□□□□□ -0.95
PFDN5-217ENST00000552548 ATP5J2-PTCD1G3V325 749 aa9.1□□□□□ -0.95
PFDN5-217ENST00000552548 BAG6P46379 1132 aa9.1□□□□□ -0.95
PFDN5-217ENST00000552548 R3HDM1Q15032 1099 aaKnown RBP9.1□□□□□ -0.95
PFDN5-217ENST00000552548 DDX21Q9NR30 783 aaKnown RBP eCLIP9.1□□□□□ -0.95
PFDN5-217ENST00000552548 TAF1LQ8IZX4 1826 aa9.1□□□□□ -0.95
PFDN5-217ENST00000552548 TUBGCP6Q96RT7 1819 aa9.1□□□□□ -0.95
PFDN5-217ENST00000552548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.09□□□□□ -0.95
PFDN5-217ENST00000552548 FAM177BA6PVY3 158 aa9.09□□□□□ -0.95
PFDN5-217ENST00000552548 RPS6KA4O75676 772 aa9.09□□□□□ -0.95
PFDN5-217ENST00000552548 CAMTA2O94983 1202 aa9.09□□□□□ -0.95
PFDN5-217ENST00000552548 TRIM27P14373 513 aa9.09□□□□□ -0.95
PFDN5-217ENST00000552548 GPTP24298 496 aa9.09□□□□□ -0.95
PFDN5-217ENST00000552548 FLIIQ13045 1269 aa9.09□□□□□ -0.95
PFDN5-217ENST00000552548 FKBP8Q14318 412 aa9.09□□□□□ -0.95
PFDN5-217ENST00000552548 CWF19L2Q2TBE0 894 aaKnown RBP9.09□□□□□ -0.95
PFDN5-217ENST00000552548 CCDC30Q5VVM6 783 aa9.09□□□□□ -0.95
PFDN5-217ENST00000552548 USPL1Q5W0Q7 1092 aa9.09□□□□□ -0.95
PFDN5-217ENST00000552548 RREB1Q92766 1687 aa9.09□□□□□ -0.95
PFDN5-217ENST00000552548 LAMB4A4D0S4 1761 aa9.09□□□□□ -0.95
PFDN5-217ENST00000552548 CNTNAP4Q9C0A0 1308 aa9.08□□□□□ -0.96
PFDN5-217ENST00000552548 PI4KAP2A4QPH2 592 aa9.08□□□□□ -0.96
PFDN5-217ENST00000552548 IGKV5-2P06315 115 aa9.08□□□□□ -0.96
PFDN5-217ENST00000552548 RRP1P56182 461 aaKnown RBP9.08□□□□□ -0.96
PFDN5-217ENST00000552548 SF3B2Q13435 895 aaKnown RBP9.08□□□□□ -0.96
PFDN5-217ENST00000552548 SLC15A2Q16348 729 aa9.08□□□□□ -0.96
PFDN5-217ENST00000552548 RTL5Q5HYW3 569 aaPredicted RBP9.08□□□□□ -0.96
PFDN5-217ENST00000552548 BICDL1Q6ZP65 573 aa9.08□□□□□ -0.96
PFDN5-217ENST00000552548 PI4KAP1Q8N8J0 262 aa9.08□□□□□ -0.96
PFDN5-217ENST00000552548 AK7Q96M32 723 aa9.08□□□□□ -0.96
PFDN5-217ENST00000552548 CRBNQ96SW2 442 aa9.08□□□□□ -0.96
PFDN5-217ENST00000552548 MAP3K2Q9Y2U5 619 aa9.08□□□□□ -0.96
PFDN5-217ENST00000552548 COL15A1P39059 1388 aa9.08□□□□□ -0.96
PFDN5-217ENST00000552548 MSH5O43196 834 aa9.07□□□□□ -0.96
PFDN5-217ENST00000552548 STARD3NLO95772 234 aa9.07□□□□□ -0.96
PFDN5-217ENST00000552548 HOXB7P09629 217 aa9.07□□□□□ -0.96
PFDN5-217ENST00000552548 SLC27A3Q5K4L6 730 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms