RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 RASSF7Q02833 373 aa23.08■■□□□ 1.29
CACNB3-222ENST00000552465 ADAMTS7Q9UKP4 1686 aa23.08■■□□□ 1.29
CACNB3-222ENST00000552465 ZC3H4Q9UPT8 1303 aaKnown RBP23.08■■□□□ 1.28
CACNB3-222ENST00000552465 HSPA5P11021 654 aaKnown RBP23.07■■□□□ 1.28
CACNB3-222ENST00000552465 LMNB1P20700 586 aa23.06■■□□□ 1.28
CACNB3-222ENST00000552465 SLC39A6Q13433 755 aa23.06■■□□□ 1.28
CACNB3-222ENST00000552465 RNMTO43148 476 aaKnown RBP23.05■■□□□ 1.28
CACNB3-222ENST00000552465 SERPINB2P05120 415 aa23.05■■□□□ 1.28
CACNB3-222ENST00000552465 PRELPP51888 382 aa23.05■■□□□ 1.28
CACNB3-222ENST00000552465 BCL2L12Q9HB09 334 aa23.05■■□□□ 1.28
CACNB3-222ENST00000552465 GLTPD2A6NH11 291 aa23.04■■□□□ 1.28
CACNB3-222ENST00000552465 VEGFAP15692 232 aaPredicted RBP23.04■■□□□ 1.28
CACNB3-222ENST00000552465 TTLL6Q8N841 843 aa23.04■■□□□ 1.28
CACNB3-222ENST00000552465 ZBTB1Q9Y2K1 713 aa23.04■■□□□ 1.28
CACNB3-222ENST00000552465 COL15A1P39059 1388 aa23.03■■□□□ 1.28
CACNB3-222ENST00000552465 KNSTRNQ9Y448 316 aa23.03■■□□□ 1.28
CACNB3-222ENST00000552465 TNRC6CQ9HCJ0 1690 aaKnown RBP23.03■■□□□ 1.28
CACNB3-222ENST00000552465 SBF1O95248 1867 aa23.02■■□□□ 1.28
CACNB3-222ENST00000552465 SCN11AQ9UI33 1791 aa23.02■■□□□ 1.28
CACNB3-222ENST00000552465 C2CD5Q86YS7 1000 aa23.02■■□□□ 1.28
CACNB3-222ENST00000552465 CLSPNQ9HAW4 1339 aa23.02■■□□□ 1.28
CACNB3-222ENST00000552465 VSIG10Q8N0Z9 540 aa23.01■■□□□ 1.27
CACNB3-222ENST00000552465 MRC1P22897 1456 aa22.99■■□□□ 1.27
CACNB3-222ENST00000552465 H0YIN7 160 aa22.99■■□□□ 1.27
CACNB3-222ENST00000552465 HMOX1P09601 288 aa22.99■■□□□ 1.27
CACNB3-222ENST00000552465 NFKBIEO00221 500 aa22.98■■□□□ 1.27
CACNB3-222ENST00000552465 CANXP27824 592 aaKnown RBP22.98■■□□□ 1.27
CACNB3-222ENST00000552465 MTHFSDQ2M296 383 aaKnown RBP22.98■■□□□ 1.27
CACNB3-222ENST00000552465 TNS4Q8IZW8 715 aa22.98■■□□□ 1.27
CACNB3-222ENST00000552465 NRXN2Q9P2S2 1712 aa22.97■■□□□ 1.27
CACNB3-222ENST00000552465 AMER1Q5JTC6 1135 aaPredicted RBP22.97■■□□□ 1.27
CACNB3-222ENST00000552465 CAPN15O75808 1086 aa22.96■■□□□ 1.27
CACNB3-222ENST00000552465 BICDL1Q6ZP65 573 aa22.96■■□□□ 1.27
CACNB3-222ENST00000552465 CARMIL3Q8ND23 1372 aa22.96■■□□□ 1.27
CACNB3-222ENST00000552465 AFDNP55196 1824 aaKnown RBP22.96■■□□□ 1.27
CACNB3-222ENST00000552465 POTECB2RU33 542 aa22.95■■□□□ 1.26
CACNB3-222ENST00000552465 EIF5P55010 431 aaKnown RBP22.95■■□□□ 1.26
CACNB3-222ENST00000552465 A0A087WZG4 1122 aa22.94■■□□□ 1.26
CACNB3-222ENST00000552465 STARD3NLO95772 234 aa22.94■■□□□ 1.26
CACNB3-222ENST00000552465 DPY19L2Q6NUT2 758 aa22.94■■□□□ 1.26
CACNB3-222ENST00000552465 PCGF6Q9BYE7 350 aa22.94■■□□□ 1.26
CACNB3-222ENST00000552465 HSPA1AP0DMV8 641 aaKnown RBP22.92■■□□□ 1.26
CACNB3-222ENST00000552465 HSPA1BP0DMV9 641 aaKnown RBP22.92■■□□□ 1.26
CACNB3-222ENST00000552465 TBC1D9BQ66K14 1250 aa22.92■■□□□ 1.26
CACNB3-222ENST00000552465 TTC5Q8N0Z6 440 aa22.92■■□□□ 1.26
CACNB3-222ENST00000552465 ZNF622Q969S3 477 aaKnown RBP eCLIP22.92■■□□□ 1.26
CACNB3-222ENST00000552465 PDZRN3Q9UPQ7 1066 aa22.92■■□□□ 1.26
CACNB3-222ENST00000552465 PDE6BP35913 854 aa22.91■■□□□ 1.26
CACNB3-222ENST00000552465 BRIP1Q9BX63 1249 aa22.91■■□□□ 1.26
CACNB3-222ENST00000552465 DLEC1Q9Y238 1755 aa22.91■■□□□ 1.26
CACNB3-222ENST00000552465 C21orf2O43822 256 aa22.9■■□□□ 1.26
CACNB3-222ENST00000552465 DIAPH1O60610 1272 aaKnown RBP22.9■■□□□ 1.26
CACNB3-222ENST00000552465 ERFEQ4G0M1 354 aa22.89■■□□□ 1.25
CACNB3-222ENST00000552465 ZNF496Q96IT1 587 aaPredicted RBP22.89■■□□□ 1.25
CACNB3-222ENST00000552465 ZNF219Q9P2Y4 722 aaPredicted RBP22.89■■□□□ 1.25
CACNB3-222ENST00000552465 PRR5LQ6MZQ0 368 aa22.88■■□□□ 1.25
CACNB3-222ENST00000552465 CCDC24Q8N4L8 307 aa22.88■■□□□ 1.25
CACNB3-222ENST00000552465 TEX13AQ9BXU3 409 aaPredicted RBP22.88■■□□□ 1.25
CACNB3-222ENST00000552465 TBC1D2BQ9UPU7 963 aa22.88■■□□□ 1.25
CACNB3-222ENST00000552465 ZNF790Q6PG37 636 aa22.86■■□□□ 1.25
CACNB3-222ENST00000552465 IL17REQ8NFR9 667 aa22.86■■□□□ 1.25
CACNB3-222ENST00000552465 HEG1Q9ULI3 1381 aa22.86■■□□□ 1.25
CACNB3-222ENST00000552465 TIAM2Q8IVF5 1701 aa22.85■■□□□ 1.25
CACNB3-222ENST00000552465 IL6STP40189 918 aaPredicted RBP22.85■■□□□ 1.25
CACNB3-222ENST00000552465 ZNF330Q9Y3S2 320 aaPredicted RBP22.85■■□□□ 1.25
CACNB3-222ENST00000552465 LTBP3Q9NS15 1303 aa22.84■■□□□ 1.25
CACNB3-222ENST00000552465 TEFQ10587 303 aa22.84■■□□□ 1.25
CACNB3-222ENST00000552465 CHADLQ6NUI6 762 aa22.84■■□□□ 1.25
CACNB3-222ENST00000552465 TAOK3Q9H2K8 898 aa22.84■■□□□ 1.25
CACNB3-222ENST00000552465 UBR2Q8IWV8 1755 aa22.84■■□□□ 1.25
CACNB3-222ENST00000552465 PER1O15534 1290 aaPredicted RBP22.83■■□□□ 1.25
CACNB3-222ENST00000552465 CNKSR1Q969H4 720 aa22.83■■□□□ 1.25
CACNB3-222ENST00000552465 SETDB2Q96T68 719 aa22.83■■□□□ 1.25
CACNB3-222ENST00000552465 CCDC88AQ3V6T2 1871 aa22.82■■□□□ 1.24
CACNB3-222ENST00000552465 GNAT3A8MTJ3 354 aa22.82■■□□□ 1.24
CACNB3-222ENST00000552465 DDNO94850 711 aaPredicted RBP22.82■■□□□ 1.24
CACNB3-222ENST00000552465 STYK1Q6J9G0 422 aa22.82■■□□□ 1.24
CACNB3-222ENST00000552465 CREBZFQ9NS37 354 aa22.82■■□□□ 1.24
CACNB3-222ENST00000552465 CAMTA2O94983 1202 aa22.81■■□□□ 1.24
CACNB3-222ENST00000552465 A1BGP04217 495 aa22.81■■□□□ 1.24
CACNB3-222ENST00000552465 CC2D1BQ5T0F9 858 aaKnown RBP22.81■■□□□ 1.24
CACNB3-222ENST00000552465 CNBD1Q8NA66 436 aa22.81■■□□□ 1.24
CACNB3-222ENST00000552465 GAS2L2Q8NHY3 880 aa22.81■■□□□ 1.24
CACNB3-222ENST00000552465 ANKRD31Q8N7Z5 1873 aa22.81■■□□□ 1.24
CACNB3-222ENST00000552465 KIF7Q2M1P5 1343 aa22.81■■□□□ 1.24
CACNB3-222ENST00000552465 POTEIP0CG38 1075 aa22.8■■□□□ 1.24
CACNB3-222ENST00000552465 POTEJP0CG39 1038 aa22.8■■□□□ 1.24
CACNB3-222ENST00000552465 SRGNP10124 158 aa22.8■■□□□ 1.24
CACNB3-222ENST00000552465 NPM2Q86SE8 214 aaKnown RBP22.8■■□□□ 1.24
CACNB3-222ENST00000552465 FMNL2Q96PY5 1086 aa22.8■■□□□ 1.24
CACNB3-222ENST00000552465 VIRMAQ69YN4 1812 aaKnown RBP22.8■■□□□ 1.24
CACNB3-222ENST00000552465 NPHP1O15259 732 aa22.79■■□□□ 1.24
CACNB3-222ENST00000552465 ST5P78524 1137 aa22.79■■□□□ 1.24
CACNB3-222ENST00000552465 SOGA3Q5TF21 947 aa22.79■■□□□ 1.24
CACNB3-222ENST00000552465 PRPF40BQ6NWY9 871 aaKnown RBP22.79■■□□□ 1.24
CACNB3-222ENST00000552465 MKRN1Q9UHC7 482 aaKnown RBP22.79■■□□□ 1.24
CACNB3-222ENST00000552465 U2SURPO15042 1029 aaKnown RBP22.78■■□□□ 1.24
CACNB3-222ENST00000552465 MASTLQ96GX5 879 aa22.78■■□□□ 1.24
CACNB3-222ENST00000552465 FER1L6Q2WGJ9 1857 aa22.77■■□□□ 1.24
CACNB3-222ENST00000552465 KCNQ3O43525 872 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms