RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 UBR3Q6ZT12 1888 aa7.85□□□□□ -1.15
CCDC65-204ENST00000552188 LOC102724428A0A0B4J2F2 783 aa7.84□□□□□ -1.15
CCDC65-204ENST00000552188 GNAT3A8MTJ3 354 aa7.84□□□□□ -1.15
CCDC65-204ENST00000552188 PRKAR2BP31323 418 aa7.84□□□□□ -1.15
CCDC65-204ENST00000552188 SIK1P57059 783 aa7.84□□□□□ -1.15
CCDC65-204ENST00000552188 TEFQ10587 303 aa7.84□□□□□ -1.15
CCDC65-204ENST00000552188 ZNF827Q17R98 1081 aa7.84□□□□□ -1.15
CCDC65-204ENST00000552188 NFATC2IPQ8NCF5 419 aa7.84□□□□□ -1.15
CCDC65-204ENST00000552188 FLAD1Q8NFF5 587 aa7.84□□□□□ -1.15
CCDC65-204ENST00000552188 RTF1Q92541 710 aaKnown RBP7.84□□□□□ -1.15
CCDC65-204ENST00000552188 MTFR1LQ9H019 292 aa7.84□□□□□ -1.15
CCDC65-204ENST00000552188 KDM6AO15550 1401 aaPredicted RBP7.84□□□□□ -1.15
CCDC65-204ENST00000552188 COL5A3P25940 1745 aaPredicted RBP7.83□□□□□ -1.16
CCDC65-204ENST00000552188 MAPK8IP3Q9UPT6 1336 aa7.83□□□□□ -1.16
CCDC65-204ENST00000552188 ZNF831Q5JPB2 1677 aa7.83□□□□□ -1.16
CCDC65-204ENST00000552188 ZNF316A6NFI3 1004 aaPredicted RBP7.83□□□□□ -1.16
CCDC65-204ENST00000552188 RNMTO43148 476 aaKnown RBP7.83□□□□□ -1.16
CCDC65-204ENST00000552188 PTCD1O75127 700 aaKnown RBP7.83□□□□□ -1.16
CCDC65-204ENST00000552188 GABBR2O75899 941 aa7.83□□□□□ -1.16
CCDC65-204ENST00000552188 FCHSD2O94868 740 aa7.83□□□□□ -1.16
CCDC65-204ENST00000552188 POLD1P28340 1107 aa7.83□□□□□ -1.16
CCDC65-204ENST00000552188 PLCB2Q00722 1185 aa7.83□□□□□ -1.16
CCDC65-204ENST00000552188 TTC5Q8N0Z6 440 aa7.83□□□□□ -1.16
CCDC65-204ENST00000552188 SLC16A10Q8TF71 515 aa7.83□□□□□ -1.16
CCDC65-204ENST00000552188 LGR6Q9HBX8 967 aa7.83□□□□□ -1.16
CCDC65-204ENST00000552188 ATG3Q9NT62 314 aa7.83□□□□□ -1.16
CCDC65-204ENST00000552188 SIPA1L3O60292 1781 aaPredicted RBP7.83□□□□□ -1.16
CCDC65-204ENST00000552188 MAP3K5Q99683 1374 aa7.83□□□□□ -1.16
CCDC65-204ENST00000552188 MYBBP1AQ9BQG0 1328 aaKnown RBP7.82□□□□□ -1.16
CCDC65-204ENST00000552188 PHF14O94880 888 aa7.82□□□□□ -1.16
CCDC65-204ENST00000552188 WDR43Q15061 677 aaKnown RBP eCLIP7.82□□□□□ -1.16
CCDC65-204ENST00000552188 BBXQ8WY36 941 aaPredicted RBP7.82□□□□□ -1.16
CCDC65-204ENST00000552188 TMEM106CQ9BVX2 250 aa7.82□□□□□ -1.16
CCDC65-204ENST00000552188 PDGFDQ9GZP0 370 aaPredicted RBP7.82□□□□□ -1.16
CCDC65-204ENST00000552188 RSPH6AQ9H0K4 717 aa7.82□□□□□ -1.16
CCDC65-204ENST00000552188 SLC52A2Q9HAB3 445 aa7.82□□□□□ -1.16
CCDC65-204ENST00000552188 PNPLA7Q6ZV29 1317 aa7.81□□□□□ -1.16
CCDC65-204ENST00000552188 GNPATO15228 680 aa7.81□□□□□ -1.16
CCDC65-204ENST00000552188 RTCBQ9Y3I0 505 aaKnown RBP7.81□□□□□ -1.16
CCDC65-204ENST00000552188 ADAMTS7Q9UKP4 1686 aa7.81□□□□□ -1.16
CCDC65-204ENST00000552188 TJP1Q07157 1748 aa7.81□□□□□ -1.16
CCDC65-204ENST00000552188 SLC39A6Q13433 755 aa7.8□□□□□ -1.16
CCDC65-204ENST00000552188 COL23A1Q86Y22 540 aaPredicted RBP7.8□□□□□ -1.16
CCDC65-204ENST00000552188 LINC00116Q8NCU8 138 aa7.8□□□□□ -1.16
CCDC65-204ENST00000552188 PHACTR3Q96KR7 559 aa7.8□□□□□ -1.16
CCDC65-204ENST00000552188 CFAP44Q96MT7 982 aa7.8□□□□□ -1.16
CCDC65-204ENST00000552188 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.8□□□□□ -1.16
CCDC65-204ENST00000552188 UBR2Q8IWV8 1755 aa7.79□□□□□ -1.16
CCDC65-204ENST00000552188 MYH14Q7Z406 1995 aaKnown RBP7.79□□□□□ -1.16
CCDC65-204ENST00000552188 COL24A1Q17RW2 1714 aa7.79□□□□□ -1.16
CCDC65-204ENST00000552188 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.79□□□□□ -1.16
CCDC65-204ENST00000552188 BTBD11A6QL63 1104 aa7.79□□□□□ -1.16
CCDC65-204ENST00000552188 SSFA2P28290 1259 aa7.79□□□□□ -1.16
CCDC65-204ENST00000552188 RFC4P35249 363 aa7.79□□□□□ -1.16
CCDC65-204ENST00000552188 ITPK1Q13572 414 aa7.79□□□□□ -1.16
CCDC65-204ENST00000552188 TRAPPC3LQ5T215 181 aa7.79□□□□□ -1.16
CCDC65-204ENST00000552188 MSL1Q68DK7 614 aa7.79□□□□□ -1.16
CCDC65-204ENST00000552188 PAXIP1Q6ZW49 1069 aaPredicted RBP7.79□□□□□ -1.16
CCDC65-204ENST00000552188 NPM2Q86SE8 214 aaKnown RBP7.79□□□□□ -1.16
CCDC65-204ENST00000552188 SP7Q8TDD2 431 aaPredicted RBP7.79□□□□□ -1.16
CCDC65-204ENST00000552188 PRKRIP1Q9H875 184 aaPredicted RBP7.79□□□□□ -1.16
CCDC65-204ENST00000552188 BMP2KQ9NSY1 1161 aaPredicted RBP7.79□□□□□ -1.16
CCDC65-204ENST00000552188 MRC1P22897 1456 aa7.79□□□□□ -1.16
CCDC65-204ENST00000552188 C4AP0C0L4 1744 aa7.78□□□□□ -1.16
CCDC65-204ENST00000552188 TTLL13PA6NNM8 815 aa7.78□□□□□ -1.16
CCDC65-204ENST00000552188 ANP32CO43423 234 aa7.78□□□□□ -1.16
CCDC65-204ENST00000552188 HTATSF1O43719 755 aaKnown RBP7.78□□□□□ -1.16
CCDC65-204ENST00000552188 PTGER2P43116 358 aa7.78□□□□□ -1.16
CCDC65-204ENST00000552188 CLCN6P51797 869 aa7.78□□□□□ -1.16
CCDC65-204ENST00000552188 RC3H1Q5TC82 1133 aaKnown RBP7.78□□□□□ -1.16
CCDC65-204ENST00000552188 MCM10Q7L590 875 aa7.78□□□□□ -1.16
CCDC65-204ENST00000552188 IL17REQ8NFR9 667 aa7.78□□□□□ -1.16
CCDC65-204ENST00000552188 CICQ96RK0 1608 aaPredicted RBP7.78□□□□□ -1.16
CCDC65-204ENST00000552188 RPS6KA4O75676 772 aa7.77□□□□□ -1.17
CCDC65-204ENST00000552188 STARD3NLO95772 234 aa7.77□□□□□ -1.17
CCDC65-204ENST00000552188 TIE1P35590 1138 aa7.77□□□□□ -1.17
CCDC65-204ENST00000552188 CRKLP46109 303 aaKnown RBP7.77□□□□□ -1.17
CCDC65-204ENST00000552188 GOLGA2Q08379 1002 aa7.77□□□□□ -1.17
CCDC65-204ENST00000552188 DCTN1Q14203 1278 aa7.77□□□□□ -1.17
CCDC65-204ENST00000552188 NFE2L2Q16236 605 aa7.77□□□□□ -1.17
CCDC65-204ENST00000552188 DNAJC10Q8IXB1 793 aa7.77□□□□□ -1.17
CCDC65-204ENST00000552188 FMNL2Q96PY5 1086 aa7.77□□□□□ -1.17
CCDC65-204ENST00000552188 TEX13AQ9BXU3 409 aaPredicted RBP7.77□□□□□ -1.17
CCDC65-204ENST00000552188 CCDC87Q9NVE4 849 aa7.77□□□□□ -1.17
CCDC65-204ENST00000552188 CNTNAP4Q9C0A0 1308 aa7.77□□□□□ -1.17
CCDC65-204ENST00000552188 LMOD3Q0VAK6 560 aa7.76□□□□□ -1.17
CCDC65-204ENST00000552188 TAF7Q15545 349 aaPredicted RBP7.76□□□□□ -1.17
CCDC65-204ENST00000552188 NEUROD2Q15784 382 aa7.76□□□□□ -1.17
CCDC65-204ENST00000552188 ZNF790Q6PG37 636 aa7.76□□□□□ -1.17
CCDC65-204ENST00000552188 SMIM5Q71RC9 77 aa7.76□□□□□ -1.17
CCDC65-204ENST00000552188 PELP1Q8IZL8 1130 aaKnown RBP7.76□□□□□ -1.17
CCDC65-204ENST00000552188 VSIG10Q8N0Z9 540 aa7.76□□□□□ -1.17
CCDC65-204ENST00000552188 EFCAB3Q8N7B9 438 aa7.76□□□□□ -1.17
CCDC65-204ENST00000552188 SLC4A9Q96Q91 983 aa7.76□□□□□ -1.17
CCDC65-204ENST00000552188 FHDC1Q9C0D6 1143 aaPredicted RBP7.76□□□□□ -1.17
CCDC65-204ENST00000552188 ZNF330Q9Y3S2 320 aaPredicted RBP7.76□□□□□ -1.17
CCDC65-204ENST00000552188 KCPQ6ZWJ8 1503 aa7.76□□□□□ -1.17
CCDC65-204ENST00000552188 KDM3BQ7LBC6 1761 aa7.76□□□□□ -1.17
CCDC65-204ENST00000552188 LAMB4A4D0S4 1761 aa7.75□□□□□ -1.17
CCDC65-204ENST00000552188 ZPR1O75312 459 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms