RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 NRXN2Q9P2S2 1712 aa22.28■■□□□ 1.16
RAB5C-209ENST00000552162 HTRA3P83110 453 aa22.28■■□□□ 1.16
RAB5C-209ENST00000552162 KLRG1Q96E93 195 aa22.27■■□□□ 1.16
RAB5C-209ENST00000552162 RRAGCQ9HB90 399 aa22.27■■□□□ 1.16
RAB5C-209ENST00000552162 COL15A1P39059 1388 aa22.26■■□□□ 1.15
RAB5C-209ENST00000552162 KNSTRNQ9Y448 316 aa22.26■■□□□ 1.15
RAB5C-209ENST00000552162 CYP19A1P11511 503 aaPredicted RBP22.25■■□□□ 1.15
RAB5C-209ENST00000552162 RASSF7Q02833 373 aa22.25■■□□□ 1.15
RAB5C-209ENST00000552162 LGR6Q9HBX8 967 aa22.25■■□□□ 1.15
RAB5C-209ENST00000552162 SLC39A6Q13433 755 aa22.24■■□□□ 1.15
RAB5C-209ENST00000552162 NFIXQ14938 502 aa22.24■■□□□ 1.15
RAB5C-209ENST00000552162 NARFQ9UHQ1 456 aa22.24■■□□□ 1.15
RAB5C-209ENST00000552162 TIAM2Q8IVF5 1701 aa22.23■■□□□ 1.15
RAB5C-209ENST00000552162 UBR2Q8IWV8 1755 aa22.23■■□□□ 1.15
RAB5C-209ENST00000552162 RNMTO43148 476 aaKnown RBP22.23■■□□□ 1.15
RAB5C-209ENST00000552162 PCGF6Q9BYE7 350 aa22.23■■□□□ 1.15
RAB5C-209ENST00000552162 ZBTB1Q9Y2K1 713 aa22.23■■□□□ 1.15
RAB5C-209ENST00000552162 ZC3H4Q9UPT8 1303 aaKnown RBP22.23■■□□□ 1.15
RAB5C-209ENST00000552162 JMYQ8N9B5 988 aa22.22■■□□□ 1.15
RAB5C-209ENST00000552162 HMOX1P09601 288 aa22.21■■□□□ 1.15
RAB5C-209ENST00000552162 SMC1BQ8NDV3 1235 aa22.21■■□□□ 1.15
RAB5C-209ENST00000552162 BCL2L12Q9HB09 334 aa22.2■■□□□ 1.14
RAB5C-209ENST00000552162 SERPINB2P05120 415 aa22.19■■□□□ 1.14
RAB5C-209ENST00000552162 LMNB1P20700 586 aa22.19■■□□□ 1.14
RAB5C-209ENST00000552162 AMER1Q5JTC6 1135 aaPredicted RBP22.19■■□□□ 1.14
RAB5C-209ENST00000552162 CCDC88AQ3V6T2 1871 aa22.19■■□□□ 1.14
RAB5C-209ENST00000552162 PCNTO95613 3336 aa22.18■■□□□ 1.14
RAB5C-209ENST00000552162 CARMIL3Q8ND23 1372 aa22.18■■□□□ 1.14
RAB5C-209ENST00000552162 VSIG10Q8N0Z9 540 aa22.18■■□□□ 1.14
RAB5C-209ENST00000552162 PRELPP51888 382 aa22.17■■□□□ 1.14
RAB5C-209ENST00000552162 MTHFSDQ2M296 383 aaKnown RBP22.17■■□□□ 1.14
RAB5C-209ENST00000552162 TTLL6Q8N841 843 aa22.17■■□□□ 1.14
RAB5C-209ENST00000552162 GLTPD2A6NH11 291 aa22.16■■□□□ 1.14
RAB5C-209ENST00000552162 COL13A1Q5TAT6 717 aaPredicted RBP22.16■■□□□ 1.14
RAB5C-209ENST00000552162 C2CD5Q86YS7 1000 aa22.16■■□□□ 1.14
RAB5C-209ENST00000552162 SCN7AQ01118 1682 aa22.16■■□□□ 1.14
RAB5C-209ENST00000552162 ANKRD31Q8N7Z5 1873 aa22.15■■□□□ 1.14
RAB5C-209ENST00000552162 CANXP27824 592 aaKnown RBP22.15■■□□□ 1.14
RAB5C-209ENST00000552162 H0YIN7 160 aa22.14■■□□□ 1.13
RAB5C-209ENST00000552162 VEGFAP15692 232 aaPredicted RBP22.14■■□□□ 1.13
RAB5C-209ENST00000552162 BICDL1Q6ZP65 573 aa22.14■■□□□ 1.13
RAB5C-209ENST00000552162 NFKBIEO00221 500 aa22.13■■□□□ 1.13
RAB5C-209ENST00000552162 TTC5Q8N0Z6 440 aa22.13■■□□□ 1.13
RAB5C-209ENST00000552162 COL11A2P13942 1736 aaPredicted RBP22.13■■□□□ 1.13
RAB5C-209ENST00000552162 DIAPH1O60610 1272 aaKnown RBP22.12■■□□□ 1.13
RAB5C-209ENST00000552162 STARD3NLO95772 234 aa22.11■■□□□ 1.13
RAB5C-209ENST00000552162 EIF5P55010 431 aaKnown RBP22.11■■□□□ 1.13
RAB5C-209ENST00000552162 SIPA1L3O60292 1781 aaPredicted RBP22.1■■□□□ 1.13
RAB5C-209ENST00000552162 A0A087WZG4 1122 aa22.1■■□□□ 1.13
RAB5C-209ENST00000552162 DICER1Q9UPY3 1922 aaKnown RBP22.1■■□□□ 1.13
RAB5C-209ENST00000552162 KIF7Q2M1P5 1343 aa22.09■■□□□ 1.13
RAB5C-209ENST00000552162 FER1L6Q2WGJ9 1857 aa22.09■■□□□ 1.13
RAB5C-209ENST00000552162 TBC1D9BQ66K14 1250 aa22.09■■□□□ 1.13
RAB5C-209ENST00000552162 ZNF622Q969S3 477 aaKnown RBP eCLIP22.08■■□□□ 1.13
RAB5C-209ENST00000552162 HEG1Q9ULI3 1381 aa22.08■■□□□ 1.12
RAB5C-209ENST00000552162 ZNF496Q96IT1 587 aaPredicted RBP22.07■■□□□ 1.12
RAB5C-209ENST00000552162 ZNF330Q9Y3S2 320 aaPredicted RBP22.07■■□□□ 1.12
RAB5C-209ENST00000552162 COL3A1P02461 1466 aaPredicted RBP22.07■■□□□ 1.12
RAB5C-209ENST00000552162 PDE6BP35913 854 aa22.06■■□□□ 1.12
RAB5C-209ENST00000552162 TEFQ10587 303 aa22.06■■□□□ 1.12
RAB5C-209ENST00000552162 CC2D1BQ5T0F9 858 aaKnown RBP22.06■■□□□ 1.12
RAB5C-209ENST00000552162 TNS4Q8IZW8 715 aa22.06■■□□□ 1.12
RAB5C-209ENST00000552162 BRIP1Q9BX63 1249 aa22.06■■□□□ 1.12
RAB5C-209ENST00000552162 ZNF219Q9P2Y4 722 aaPredicted RBP22.06■■□□□ 1.12
RAB5C-209ENST00000552162 PDZRN3Q9UPQ7 1066 aa22.06■■□□□ 1.12
RAB5C-209ENST00000552162 CACNA1SQ13698 1873 aa22.06■■□□□ 1.12
RAB5C-209ENST00000552162 POTECB2RU33 542 aa22.05■■□□□ 1.12
RAB5C-209ENST00000552162 C21orf2O43822 256 aa22.05■■□□□ 1.12
RAB5C-209ENST00000552162 CAPN15O75808 1086 aa22.05■■□□□ 1.12
RAB5C-209ENST00000552162 PRR5LQ6MZQ0 368 aa22.05■■□□□ 1.12
RAB5C-209ENST00000552162 DPY19L2Q6NUT2 758 aa22.05■■□□□ 1.12
RAB5C-209ENST00000552162 ZNF790Q6PG37 636 aa22.05■■□□□ 1.12
RAB5C-209ENST00000552162 TBC1D2BQ9UPU7 963 aa22.05■■□□□ 1.12
RAB5C-209ENST00000552162 BCORQ6W2J9 1755 aa22.04■■□□□ 1.12
RAB5C-209ENST00000552162 CCDC24Q8N4L8 307 aa22.04■■□□□ 1.12
RAB5C-209ENST00000552162 TEX13AQ9BXU3 409 aaPredicted RBP22.04■■□□□ 1.12
RAB5C-209ENST00000552162 ARFGEF2Q9Y6D5 1785 aa22.03■■□□□ 1.12
RAB5C-209ENST00000552162 GNAT3A8MTJ3 354 aa22.03■■□□□ 1.12
RAB5C-209ENST00000552162 PER1O15534 1290 aaPredicted RBP22.03■■□□□ 1.12
RAB5C-209ENST00000552162 HSPA1AP0DMV8 641 aaKnown RBP22.03■■□□□ 1.12
RAB5C-209ENST00000552162 HSPA1BP0DMV9 641 aaKnown RBP22.03■■□□□ 1.12
RAB5C-209ENST00000552162 IL6STP40189 918 aaPredicted RBP22.03■■□□□ 1.12
RAB5C-209ENST00000552162 ERFEQ4G0M1 354 aa22.03■■□□□ 1.12
RAB5C-209ENST00000552162 IL17REQ8NFR9 667 aa22.03■■□□□ 1.12
RAB5C-209ENST00000552162 GAS2L2Q8NHY3 880 aa22.03■■□□□ 1.12
RAB5C-209ENST00000552162 SLX4Q8IY92 1834 aa22.01■■□□□ 1.11
RAB5C-209ENST00000552162 U2SURPO15042 1029 aaKnown RBP22.01■■□□□ 1.11
RAB5C-209ENST00000552162 CNBD1Q8NA66 436 aa22.01■■□□□ 1.11
RAB5C-209ENST00000552162 TAOK3Q9H2K8 898 aa22.01■■□□□ 1.11
RAB5C-209ENST00000552162 LTBP3Q9NS15 1303 aa22.01■■□□□ 1.11
RAB5C-209ENST00000552162 NPHP1O15259 732 aa22■■□□□ 1.11
RAB5C-209ENST00000552162 NPM2Q86SE8 214 aaKnown RBP22■■□□□ 1.11
RAB5C-209ENST00000552162 FMNL2Q96PY5 1086 aa22■■□□□ 1.11
RAB5C-209ENST00000552162 CAMTA2O94983 1202 aa21.99■■□□□ 1.11
RAB5C-209ENST00000552162 CCER1Q8TC90 406 aaPredicted RBP21.99■■□□□ 1.11
RAB5C-209ENST00000552162 SETDB2Q96T68 719 aa21.99■■□□□ 1.11
RAB5C-209ENST00000552162 CEMIPQ8WUJ3 1361 aa21.99■■□□□ 1.11
RAB5C-209ENST00000552162 A1BGP04217 495 aa21.98■■□□□ 1.11
RAB5C-209ENST00000552162 ST5P78524 1137 aa21.98■■□□□ 1.11
RAB5C-209ENST00000552162 CNKSR1Q969H4 720 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms