RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 KDM2BQ8NHM5 1336 aa29.53■■■□□ 2.32
SMARCD1-212ENST00000551966 FSTL1Q12841 308 aa29.53■■■□□ 2.32
SMARCD1-212ENST00000551966 NFIXQ14938 502 aa29.53■■■□□ 2.32
SMARCD1-212ENST00000551966 WDR90Q96KV7 1748 aa29.52■■■□□ 2.32
SMARCD1-212ENST00000551966 AMER1Q5JTC6 1135 aaPredicted RBP29.52■■■□□ 2.32
SMARCD1-212ENST00000551966 BCL2L12Q9HB09 334 aa29.52■■■□□ 2.32
SMARCD1-212ENST00000551966 NARFQ9UHQ1 456 aa29.52■■■□□ 2.32
SMARCD1-212ENST00000551966 HMOX1P09601 288 aa29.5■■■□□ 2.31
SMARCD1-212ENST00000551966 PRELPP51888 382 aa29.5■■■□□ 2.31
SMARCD1-212ENST00000551966 KLRG1Q96E93 195 aa29.5■■■□□ 2.31
SMARCD1-212ENST00000551966 ZBTB1Q9Y2K1 713 aa29.5■■■□□ 2.31
SMARCD1-212ENST00000551966 RASSF7Q02833 373 aa29.49■■■□□ 2.31
SMARCD1-212ENST00000551966 MTHFSDQ2M296 383 aaKnown RBP29.48■■■□□ 2.31
SMARCD1-212ENST00000551966 SERPINB2P05120 415 aa29.47■■■□□ 2.31
SMARCD1-212ENST00000551966 JMYQ8N9B5 988 aa29.47■■■□□ 2.31
SMARCD1-212ENST00000551966 AFDNP55196 1824 aaKnown RBP29.47■■■□□ 2.31
SMARCD1-212ENST00000551966 MRC1P22897 1456 aa29.47■■■□□ 2.31
SMARCD1-212ENST00000551966 COL15A1P39059 1388 aa29.46■■■□□ 2.31
SMARCD1-212ENST00000551966 NRXN2Q9P2S2 1712 aa29.45■■■□□ 2.3
SMARCD1-212ENST00000551966 VSIG10Q8N0Z9 540 aa29.44■■■□□ 2.3
SMARCD1-212ENST00000551966 LMNB1P20700 586 aa29.41■■■□□ 2.3
SMARCD1-212ENST00000551966 CANXP27824 592 aaKnown RBP29.41■■■□□ 2.3
SMARCD1-212ENST00000551966 TTLL6Q8N841 843 aa29.41■■■□□ 2.3
SMARCD1-212ENST00000551966 TNRC6CQ9HCJ0 1690 aaKnown RBP29.4■■■□□ 2.3
SMARCD1-212ENST00000551966 GLTPD2A6NH11 291 aa29.4■■■□□ 2.3
SMARCD1-212ENST00000551966 COL13A1Q5TAT6 717 aaPredicted RBP29.4■■■□□ 2.3
SMARCD1-212ENST00000551966 C2CD5Q86YS7 1000 aa29.4■■■□□ 2.3
SMARCD1-212ENST00000551966 SMC1BQ8NDV3 1235 aa29.4■■■□□ 2.3
SMARCD1-212ENST00000551966 VIRMAQ69YN4 1812 aaKnown RBP29.4■■■□□ 2.3
SMARCD1-212ENST00000551966 ZC3H4Q9UPT8 1303 aaKnown RBP29.39■■■□□ 2.3
SMARCD1-212ENST00000551966 CARMIL3Q8ND23 1372 aa29.39■■■□□ 2.29
SMARCD1-212ENST00000551966 PER1O15534 1290 aaPredicted RBP29.38■■■□□ 2.29
SMARCD1-212ENST00000551966 EIF5P55010 431 aaKnown RBP29.38■■■□□ 2.29
SMARCD1-212ENST00000551966 DIAPH1O60610 1272 aaKnown RBP29.37■■■□□ 2.29
SMARCD1-212ENST00000551966 BICDL1Q6ZP65 573 aa29.37■■■□□ 2.29
SMARCD1-212ENST00000551966 H0YIN7 160 aa29.36■■■□□ 2.29
SMARCD1-212ENST00000551966 NFKBIEO00221 500 aa29.36■■■□□ 2.29
SMARCD1-212ENST00000551966 VEGFAP15692 232 aaPredicted RBP29.36■■■□□ 2.29
SMARCD1-212ENST00000551966 DLEC1Q9Y238 1755 aa29.36■■■□□ 2.29
SMARCD1-212ENST00000551966 KIF7Q2M1P5 1343 aa29.35■■■□□ 2.29
SMARCD1-212ENST00000551966 POTECB2RU33 542 aa29.34■■■□□ 2.29
SMARCD1-212ENST00000551966 TBC1D9BQ66K14 1250 aa29.34■■■□□ 2.29
SMARCD1-212ENST00000551966 UBR2Q8IWV8 1755 aa29.34■■■□□ 2.29
SMARCD1-212ENST00000551966 STARD3NLO95772 234 aa29.33■■■□□ 2.29
SMARCD1-212ENST00000551966 IL17REQ8NFR9 667 aa29.33■■■□□ 2.29
SMARCD1-212ENST00000551966 ZNF496Q96IT1 587 aaPredicted RBP29.33■■■□□ 2.29
SMARCD1-212ENST00000551966 A0A087WZG4 1122 aa29.31■■■□□ 2.28
SMARCD1-212ENST00000551966 CC2D1BQ5T0F9 858 aaKnown RBP29.31■■■□□ 2.28
SMARCD1-212ENST00000551966 TTC5Q8N0Z6 440 aa29.31■■■□□ 2.28
SMARCD1-212ENST00000551966 CCDC88AQ3V6T2 1871 aa29.31■■■□□ 2.28
SMARCD1-212ENST00000551966 CCDC24Q8N4L8 307 aa29.3■■■□□ 2.28
SMARCD1-212ENST00000551966 TBC1D2BQ9UPU7 963 aa29.3■■■□□ 2.28
SMARCD1-212ENST00000551966 ZNF790Q6PG37 636 aa29.29■■■□□ 2.28
SMARCD1-212ENST00000551966 PRR5LQ6MZQ0 368 aa29.28■■■□□ 2.28
SMARCD1-212ENST00000551966 ZNF622Q969S3 477 aaKnown RBP eCLIP29.28■■■□□ 2.28
SMARCD1-212ENST00000551966 BRIP1Q9BX63 1249 aa29.28■■■□□ 2.28
SMARCD1-212ENST00000551966 HEG1Q9ULI3 1381 aa29.27■■■□□ 2.28
SMARCD1-212ENST00000551966 C21orf2O43822 256 aa29.27■■■□□ 2.28
SMARCD1-212ENST00000551966 ZNF219Q9P2Y4 722 aaPredicted RBP29.27■■■□□ 2.28
SMARCD1-212ENST00000551966 ANKRD31Q8N7Z5 1873 aa29.27■■■□□ 2.28
SMARCD1-212ENST00000551966 GNAT3A8MTJ3 354 aa29.25■■■□□ 2.27
SMARCD1-212ENST00000551966 PDE6BP35913 854 aa29.25■■■□□ 2.27
SMARCD1-212ENST00000551966 TEX13AQ9BXU3 409 aaPredicted RBP29.25■■■□□ 2.27
SMARCD1-212ENST00000551966 TIAM2Q8IVF5 1701 aa29.25■■■□□ 2.27
SMARCD1-212ENST00000551966 A1BGP04217 495 aa29.24■■■□□ 2.27
SMARCD1-212ENST00000551966 IL6STP40189 918 aaPredicted RBP29.24■■■□□ 2.27
SMARCD1-212ENST00000551966 TEFQ10587 303 aa29.24■■■□□ 2.27
SMARCD1-212ENST00000551966 ZNF330Q9Y3S2 320 aaPredicted RBP29.24■■■□□ 2.27
SMARCD1-212ENST00000551966 DPY19L2Q6NUT2 758 aa29.23■■■□□ 2.27
SMARCD1-212ENST00000551966 CCER1Q8TC90 406 aaPredicted RBP29.23■■■□□ 2.27
SMARCD1-212ENST00000551966 PDZRN3Q9UPQ7 1066 aa29.23■■■□□ 2.27
SMARCD1-212ENST00000551966 COL3A1P02461 1466 aaPredicted RBP29.23■■■□□ 2.27
SMARCD1-212ENST00000551966 U2SURPO15042 1029 aaKnown RBP29.22■■■□□ 2.27
SMARCD1-212ENST00000551966 KCNQ3O43525 872 aa29.21■■■□□ 2.27
SMARCD1-212ENST00000551966 CAMTA2O94983 1202 aa29.21■■■□□ 2.27
SMARCD1-212ENST00000551966 ERFEQ4G0M1 354 aa29.21■■■□□ 2.27
SMARCD1-212ENST00000551966 GAS2L2Q8NHY3 880 aa29.2■■■□□ 2.26
SMARCD1-212ENST00000551966 FER1L6Q2WGJ9 1857 aa29.19■■■□□ 2.26
SMARCD1-212ENST00000551966 SIPA1L3O60292 1781 aaPredicted RBP29.18■■■□□ 2.26
SMARCD1-212ENST00000551966 PCNTO95613 3336 aa29.18■■■□□ 2.26
SMARCD1-212ENST00000551966 COL11A2P13942 1736 aaPredicted RBP29.18■■■□□ 2.26
SMARCD1-212ENST00000551966 CNGB1Q14028 1251 aaPredicted RBP29.18■■■□□ 2.26
SMARCD1-212ENST00000551966 TNS4Q8IZW8 715 aa29.18■■■□□ 2.26
SMARCD1-212ENST00000551966 PHACTR3Q96KR7 559 aa29.18■■■□□ 2.26
SMARCD1-212ENST00000551966 FMNL2Q96PY5 1086 aa29.18■■■□□ 2.26
SMARCD1-212ENST00000551966 SETDB2Q96T68 719 aa29.18■■■□□ 2.26
SMARCD1-212ENST00000551966 SCN7AQ01118 1682 aa29.18■■■□□ 2.26
SMARCD1-212ENST00000551966 HSPA1AP0DMV8 641 aaKnown RBP29.17■■■□□ 2.26
SMARCD1-212ENST00000551966 HSPA1BP0DMV9 641 aaKnown RBP29.17■■■□□ 2.26
SMARCD1-212ENST00000551966 LTBP3Q9NS15 1303 aa29.17■■■□□ 2.26
SMARCD1-212ENST00000551966 CEMIPQ8WUJ3 1361 aa29.16■■■□□ 2.26
SMARCD1-212ENST00000551966 CAPN15O75808 1086 aa29.16■■■□□ 2.26
SMARCD1-212ENST00000551966 SRGNP10124 158 aa29.16■■■□□ 2.26
SMARCD1-212ENST00000551966 USP16Q9Y5T5 823 aa29.16■■■□□ 2.26
SMARCD1-212ENST00000551966 DICER1Q9UPY3 1922 aaKnown RBP29.16■■■□□ 2.26
SMARCD1-212ENST00000551966 DDNO94850 711 aaPredicted RBP29.15■■■□□ 2.26
SMARCD1-212ENST00000551966 STYK1Q6J9G0 422 aa29.15■■■□□ 2.26
SMARCD1-212ENST00000551966 CNBD1Q8NA66 436 aa29.15■■■□□ 2.26
SMARCD1-212ENST00000551966 SLX4Q8IY92 1834 aa29.15■■■□□ 2.26
SMARCD1-212ENST00000551966 POTEIP0CG38 1075 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms