RNA–Protein interactions for RNA: ENST00000551800.5

CDK4-209, Transcript of cyclin dependent kinase 4, humanhuman

TSL 5

Gene CDK4, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-209ENST00000551800 USPL1Q5W0Q7 1092 aa22.99■■□□□ 1.27
CDK4-209ENST00000551800 NPM2Q86SE8 214 aaKnown RBP22.99■■□□□ 1.27
CDK4-209ENST00000551800 COL3A1P02461 1466 aaPredicted RBP22.98■■□□□ 1.27
CDK4-209ENST00000551800 CFAP53Q96M91 514 aa22.98■■□□□ 1.27
CDK4-209ENST00000551800 BCORQ6W2J9 1755 aa22.98■■□□□ 1.27
CDK4-209ENST00000551800 DALRD3Q5D0E6 543 aaKnown RBP22.97■■□□□ 1.27
CDK4-209ENST00000551800 GAS2L2Q8NHY3 880 aa22.97■■□□□ 1.27
CDK4-209ENST00000551800 SOS1Q07889 1333 aaPredicted RBP22.97■■□□□ 1.27
CDK4-209ENST00000551800 HSPA6P17066 643 aa22.96■■□□□ 1.27
CDK4-209ENST00000551800 INTS5Q6P9B9 1019 aaKnown RBP22.96■■□□□ 1.27
CDK4-209ENST00000551800 C16orf71Q8IYS4 520 aaPredicted RBP22.96■■□□□ 1.27
CDK4-209ENST00000551800 ZNF330Q9Y3S2 320 aaPredicted RBP22.96■■□□□ 1.27
CDK4-209ENST00000551800 WDR90Q96KV7 1748 aa22.96■■□□□ 1.27
CDK4-209ENST00000551800 DDR1Q08345 913 aa22.95■■□□□ 1.26
CDK4-209ENST00000551800 NPC1L1Q9UHC9 1359 aa22.95■■□□□ 1.26
CDK4-209ENST00000551800 ZBTB1Q9Y2K1 713 aa22.95■■□□□ 1.26
CDK4-209ENST00000551800 ANKRD31Q8N7Z5 1873 aa22.94■■□□□ 1.26
CDK4-209ENST00000551800 CYP19A1P11511 503 aaPredicted RBP22.94■■□□□ 1.26
CDK4-209ENST00000551800 CANXP27824 592 aaKnown RBP22.94■■□□□ 1.26
CDK4-209ENST00000551800 VSIG10Q8N0Z9 540 aa22.94■■□□□ 1.26
CDK4-209ENST00000551800 DLG5Q8TDM6 1919 aa22.94■■□□□ 1.26
CDK4-209ENST00000551800 GNAT3A8MTJ3 354 aa22.93■■□□□ 1.26
CDK4-209ENST00000551800 POLRMTO00411 1230 aaKnown RBP22.93■■□□□ 1.26
CDK4-209ENST00000551800 PER1O15534 1290 aaPredicted RBP22.93■■□□□ 1.26
CDK4-209ENST00000551800 STARD3NLO95772 234 aa22.93■■□□□ 1.26
CDK4-209ENST00000551800 NARFQ9UHQ1 456 aa22.93■■□□□ 1.26
CDK4-209ENST00000551800 CHRNA5P30532 468 aa22.92■■□□□ 1.26
CDK4-209ENST00000551800 DICER1Q9UPY3 1922 aaKnown RBP22.92■■□□□ 1.26
CDK4-209ENST00000551800 NPHP1O15259 732 aa22.91■■□□□ 1.26
CDK4-209ENST00000551800 C9orf131Q5VYM1 1079 aa22.91■■□□□ 1.26
CDK4-209ENST00000551800 RNF181Q9P0P0 153 aa22.91■■□□□ 1.26
CDK4-209ENST00000551800 LAMB4A4D0S4 1761 aa22.91■■□□□ 1.26
CDK4-209ENST00000551800 COL11A2P13942 1736 aaPredicted RBP22.91■■□□□ 1.26
CDK4-209ENST00000551800 A0A087WZG4 1122 aa22.9■■□□□ 1.26
CDK4-209ENST00000551800 KIF3CO14782 793 aa22.9■■□□□ 1.26
CDK4-209ENST00000551800 NUDCQ9Y266 331 aa22.9■■□□□ 1.26
CDK4-209ENST00000551800 ARFGEF2Q9Y6D5 1785 aa22.9■■□□□ 1.26
CDK4-209ENST00000551800 KDM2BQ8NHM5 1336 aa22.89■■□□□ 1.26
CDK4-209ENST00000551800 BICDL1Q6ZP65 573 aa22.89■■□□□ 1.25
CDK4-209ENST00000551800 TEX13AQ9BXU3 409 aaPredicted RBP22.88■■□□□ 1.25
CDK4-209ENST00000551800 HEG1Q9ULI3 1381 aa22.88■■□□□ 1.25
CDK4-209ENST00000551800 TOMM70O94826 608 aa22.87■■□□□ 1.25
CDK4-209ENST00000551800 KCNA3P22001 575 aa22.87■■□□□ 1.25
CDK4-209ENST00000551800 TM4SF1P30408 202 aa22.87■■□□□ 1.25
CDK4-209ENST00000551800 NFIXQ14938 502 aa22.87■■□□□ 1.25
CDK4-209ENST00000551800 CEP350Q5VT06 3117 aa22.86■■□□□ 1.25
CDK4-209ENST00000551800 SERPINB2P05120 415 aa22.86■■□□□ 1.25
CDK4-209ENST00000551800 ZNF790Q6PG37 636 aa22.86■■□□□ 1.25
CDK4-209ENST00000551800 FMNL2Q96PY5 1086 aa22.86■■□□□ 1.25
CDK4-209ENST00000551800 PRKAR2BP31323 418 aa22.85■■□□□ 1.25
CDK4-209ENST00000551800 RTF1Q92541 710 aaKnown RBP22.85■■□□□ 1.25
CDK4-209ENST00000551800 NMRK2Q9NPI5 230 aa22.85■■□□□ 1.25
CDK4-209ENST00000551800 FER1L6Q2WGJ9 1857 aa22.85■■□□□ 1.25
CDK4-209ENST00000551800 APLP1P51693 650 aa22.84■■□□□ 1.25
CDK4-209ENST00000551800 BTBD11A6QL63 1104 aa22.83■■□□□ 1.25
CDK4-209ENST00000551800 H0YIN7 160 aa22.83■■□□□ 1.25
CDK4-209ENST00000551800 NEFMP07197 916 aa22.83■■□□□ 1.25
CDK4-209ENST00000551800 C2CD5Q86YS7 1000 aa22.83■■□□□ 1.25
CDK4-209ENST00000551800 ZNF496Q96IT1 587 aaPredicted RBP22.83■■□□□ 1.25
CDK4-209ENST00000551800 CARMIL3Q8ND23 1372 aa22.83■■□□□ 1.25
CDK4-209ENST00000551800 U2AF1L5P0DN76 240 aaPredicted RBP22.81■■□□□ 1.24
CDK4-209ENST00000551800 U2AF1Q01081 240 aaKnown RBP eCLIP22.81■■□□□ 1.24
CDK4-209ENST00000551800 RASSF7Q02833 373 aa22.81■■□□□ 1.24
CDK4-209ENST00000551800 TTLL6Q8N841 843 aa22.81■■□□□ 1.24
CDK4-209ENST00000551800 IL17REQ8NFR9 667 aa22.8■■□□□ 1.24
CDK4-209ENST00000551800 IL6STP40189 918 aaPredicted RBP22.79■■□□□ 1.24
CDK4-209ENST00000551800 EIF5P55010 431 aaKnown RBP22.79■■□□□ 1.24
CDK4-209ENST00000551800 TBC1D2BQ9UPU7 963 aa22.79■■□□□ 1.24
CDK4-209ENST00000551800 PDE6BP35913 854 aa22.78■■□□□ 1.24
CDK4-209ENST00000551800 ST5P78524 1137 aa22.78■■□□□ 1.24
CDK4-209ENST00000551800 RBM46Q8TBY0 533 aaKnown RBP22.78■■□□□ 1.24
CDK4-209ENST00000551800 ZNF622Q969S3 477 aaKnown RBP eCLIP22.78■■□□□ 1.24
CDK4-209ENST00000551800 RSPH6AQ9H0K4 717 aa22.78■■□□□ 1.24
CDK4-209ENST00000551800 BCL2L12Q9HB09 334 aa22.78■■□□□ 1.24
CDK4-209ENST00000551800 KDM3BQ7LBC6 1761 aa22.78■■□□□ 1.24
CDK4-209ENST00000551800 ZC3H4Q9UPT8 1303 aaKnown RBP22.78■■□□□ 1.24
CDK4-209ENST00000551800 CEMIPQ8WUJ3 1361 aa22.77■■□□□ 1.24
CDK4-209ENST00000551800 TBC1D9BQ66K14 1250 aa22.77■■□□□ 1.24
CDK4-209ENST00000551800 PDZRN3Q9UPQ7 1066 aa22.77■■□□□ 1.24
CDK4-209ENST00000551800 NUP98P52948 1817 aa22.77■■□□□ 1.24
CDK4-209ENST00000551800 SLX4Q8IY92 1834 aa22.76■■□□□ 1.23
CDK4-209ENST00000551800 LMNB1P20700 586 aa22.76■■□□□ 1.23
CDK4-209ENST00000551800 CNBD1Q8NA66 436 aa22.76■■□□□ 1.23
CDK4-209ENST00000551800 SETDB2Q96T68 719 aa22.76■■□□□ 1.23
CDK4-209ENST00000551800 DZIP3Q86Y13 1208 aaKnown RBP22.75■■□□□ 1.23
CDK4-209ENST00000551800 RRAGCQ9HB90 399 aa22.75■■□□□ 1.23
CDK4-209ENST00000551800 ZNF219Q9P2Y4 722 aaPredicted RBP22.75■■□□□ 1.23
CDK4-209ENST00000551800 ZNF652Q9Y2D9 606 aa22.75■■□□□ 1.23
CDK4-209ENST00000551800 PPP2R1AP30153 589 aa22.74■■□□□ 1.23
CDK4-209ENST00000551800 PHACTR3Q96KR7 559 aa22.74■■□□□ 1.23
CDK4-209ENST00000551800 A1BGP04217 495 aa22.73■■□□□ 1.23
CDK4-209ENST00000551800 MCM10Q7L590 875 aa22.73■■□□□ 1.23
CDK4-209ENST00000551800 FSTL1Q12841 308 aa22.72■■□□□ 1.23
CDK4-209ENST00000551800 PRR5LQ6MZQ0 368 aa22.71■■□□□ 1.23
CDK4-209ENST00000551800 CCDC24Q8N4L8 307 aa22.71■■□□□ 1.23
CDK4-209ENST00000551800 BRIP1Q9BX63 1249 aa22.71■■□□□ 1.23
CDK4-209ENST00000551800 SNRPA1P09661 255 aaKnown RBP22.7■■□□□ 1.22
CDK4-209ENST00000551800 SMC1BQ8NDV3 1235 aa22.7■■□□□ 1.22
CDK4-209ENST00000551800 PIP4K2AP48426 406 aaPredicted RBP22.69■■□□□ 1.22
CDK4-209ENST00000551800 KCNQ3O43525 872 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms