RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 DZIP3Q86Y13 1208 aaKnown RBP10.64□□□□□ -0.71
DEPDC4-210ENST00000551642 MTMR14Q8NCE2 650 aa10.64□□□□□ -0.71
DEPDC4-210ENST00000551642 PURBQ96QR8 312 aaKnown RBP10.64□□□□□ -0.71
DEPDC4-210ENST00000551642 CDC42BPAQ5VT25 1732 aa10.64□□□□□ -0.71
DEPDC4-210ENST00000551642 ESPNB1AK53 854 aa10.63□□□□□ -0.71
DEPDC4-210ENST00000551642 TERTO14746 1132 aaKnown RBP10.63□□□□□ -0.71
DEPDC4-210ENST00000551642 Q6ZVU0 165 aa10.63□□□□□ -0.71
DEPDC4-210ENST00000551642 NPAS3Q8IXF0 933 aa10.63□□□□□ -0.71
DEPDC4-210ENST00000551642 THEMISQ8N1K5 641 aaPredicted RBP10.63□□□□□ -0.71
DEPDC4-210ENST00000551642 LINC00528Q8N1L1 170 aa10.63□□□□□ -0.71
DEPDC4-210ENST00000551642 INO80Q9ULG1 1556 aaPredicted RBP10.63□□□□□ -0.71
DEPDC4-210ENST00000551642 ATP7AQ04656 1500 aa10.63□□□□□ -0.71
DEPDC4-210ENST00000551642 KDM5DQ9BY66 1539 aa10.63□□□□□ -0.71
DEPDC4-210ENST00000551642 A2MP01023 1474 aa10.62□□□□□ -0.71
DEPDC4-210ENST00000551642 WFS1O76024 890 aa10.62□□□□□ -0.71
DEPDC4-210ENST00000551642 UPP2O95045 317 aa10.62□□□□□ -0.71
DEPDC4-210ENST00000551642 SEPT12Q8IYM1 358 aa10.62□□□□□ -0.71
DEPDC4-210ENST00000551642 TSEN34Q9BSV6 310 aaKnown RBP10.62□□□□□ -0.71
DEPDC4-210ENST00000551642 FAM135AQ9P2D6 1515 aa10.62□□□□□ -0.71
DEPDC4-210ENST00000551642 PZPP20742 1482 aa10.61□□□□□ -0.71
DEPDC4-210ENST00000551642 MCCD1P59942 119 aaPredicted RBP10.61□□□□□ -0.71
DEPDC4-210ENST00000551642 MEX3CQ5U5Q3 659 aaKnown RBP10.61□□□□□ -0.71
DEPDC4-210ENST00000551642 SNRKQ9NRH2 765 aa10.61□□□□□ -0.71
DEPDC4-210ENST00000551642 NXF1Q9UBU9 619 aaKnown RBP10.61□□□□□ -0.71
DEPDC4-210ENST00000551642 NDUFB9Q9Y6M9 179 aa10.61□□□□□ -0.71
DEPDC4-210ENST00000551642 NLRP1Q9C000 1473 aa10.61□□□□□ -0.71
DEPDC4-210ENST00000551642 SPATA31A6Q5VVP1 1343 aa10.6□□□□□ -0.71
DEPDC4-210ENST00000551642 GPR37L1O60883 481 aa10.6□□□□□ -0.71
DEPDC4-210ENST00000551642 FBXO45P0C2W1 286 aa10.6□□□□□ -0.71
DEPDC4-210ENST00000551642 CCDC125Q86Z20 511 aa10.6□□□□□ -0.71
DEPDC4-210ENST00000551642 ZNF592Q92610 1267 aa10.6□□□□□ -0.71
DEPDC4-210ENST00000551642 UBR1Q8IWV7 1749 aa10.6□□□□□ -0.71
DEPDC4-210ENST00000551642 TMEM94Q12767 1356 aa10.6□□□□□ -0.71
DEPDC4-210ENST00000551642 LRRC9Q6ZRR7 1453 aa10.6□□□□□ -0.71
DEPDC4-210ENST00000551642 ADGBQ8N7X0 1667 aa10.6□□□□□ -0.71
DEPDC4-210ENST00000551642 FGD6Q6ZV73 1430 aa10.58□□□□□ -0.72
DEPDC4-210ENST00000551642 MIA2Q96PC5 1412 aa10.58□□□□□ -0.72
DEPDC4-210ENST00000551642 DIP2AQ14689 1571 aa10.58□□□□□ -0.72
DEPDC4-210ENST00000551642 BMP2P12643 396 aa10.58□□□□□ -0.72
DEPDC4-210ENST00000551642 RANGAP1P46060 587 aaPredicted RBP10.58□□□□□ -0.72
DEPDC4-210ENST00000551642 NR1H3Q13133 447 aa10.58□□□□□ -0.72
DEPDC4-210ENST00000551642 SYCP2Q9BX26 1530 aa10.58□□□□□ -0.72
DEPDC4-210ENST00000551642 TROQ12816 1431 aaPredicted RBP10.58□□□□□ -0.72
DEPDC4-210ENST00000551642 AFF2P51816 1311 aa10.58□□□□□ -0.72
DEPDC4-210ENST00000551642 C6orf118Q5T5N4 469 aa10.57□□□□□ -0.72
DEPDC4-210ENST00000551642 SOS2Q07890 1332 aaPredicted RBP10.57□□□□□ -0.72
DEPDC4-210ENST00000551642 TIAM1Q13009 1591 aa10.56□□□□□ -0.72
DEPDC4-210ENST00000551642 CFAP65Q6ZU64 1925 aaKnown RBP10.56□□□□□ -0.72
DEPDC4-210ENST00000551642 ATAD2Q6PL18 1390 aa10.56□□□□□ -0.72
DEPDC4-210ENST00000551642 CBLBQ13191 982 aa10.56□□□□□ -0.72
DEPDC4-210ENST00000551642 ZNF330Q9Y3S2 320 aaPredicted RBP10.56□□□□□ -0.72
DEPDC4-210ENST00000551642 NHSL1Q5SYE7 1610 aa10.55□□□□□ -0.72
DEPDC4-210ENST00000551642 ERVH48-1M5A8F1 160 aa10.55□□□□□ -0.72
DEPDC4-210ENST00000551642 SPINT1O43278 529 aa10.55□□□□□ -0.72
DEPDC4-210ENST00000551642 SLC16A10Q8TF71 515 aa10.55□□□□□ -0.72
DEPDC4-210ENST00000551642 SPAG9O60271 1321 aaKnown RBP10.55□□□□□ -0.72
DEPDC4-210ENST00000551642 SCAF11Q99590 1463 aaKnown RBP10.55□□□□□ -0.72
DEPDC4-210ENST00000551642 AHDC1Q5TGY3 1603 aaPredicted RBP10.55□□□□□ -0.72
DEPDC4-210ENST00000551642 WIPF1O43516 503 aa10.54□□□□□ -0.72
DEPDC4-210ENST00000551642 LTKP29376 864 aa10.54□□□□□ -0.72
DEPDC4-210ENST00000551642 RBM6P78332 1123 aaKnown RBP10.54□□□□□ -0.72
DEPDC4-210ENST00000551642 PRM3Q9NNZ6 103 aa10.54□□□□□ -0.72
DEPDC4-210ENST00000551642 PCDHB9Q9Y5E1 797 aa10.54□□□□□ -0.72
DEPDC4-210ENST00000551642 MAN1A2O60476 641 aa10.53□□□□□ -0.72
DEPDC4-210ENST00000551642 LILRA1O75019 489 aa10.53□□□□□ -0.72
DEPDC4-210ENST00000551642 TMPRSS4Q9NRS4 437 aa10.53□□□□□ -0.72
DEPDC4-210ENST00000551642 SLAIN2Q9P270 581 aa10.53□□□□□ -0.72
DEPDC4-210ENST00000551642 KDM5AP29375 1690 aaKnown RBP10.53□□□□□ -0.72
DEPDC4-210ENST00000551642 YY1P25490 414 aa10.52□□□□□ -0.73
DEPDC4-210ENST00000551642 RNF20Q5VTR2 975 aa10.52□□□□□ -0.73
DEPDC4-210ENST00000551642 ZNF784Q8NCA9 323 aaPredicted RBP10.52□□□□□ -0.73
DEPDC4-210ENST00000551642 QTRT2Q9H974 415 aaKnown RBP10.52□□□□□ -0.73
DEPDC4-210ENST00000551642 NCOA2Q15596 1464 aa10.52□□□□□ -0.73
DEPDC4-210ENST00000551642 ARHGAP23Q9P227 1491 aa10.52□□□□□ -0.73
DEPDC4-210ENST00000551642 PRDM15P57071 1507 aaPredicted RBP10.52□□□□□ -0.73
DEPDC4-210ENST00000551642 H3BM21 787 aa10.51□□□□□ -0.73
DEPDC4-210ENST00000551642 GIGYF1O75420 1035 aaPredicted RBP10.51□□□□□ -0.73
DEPDC4-210ENST00000551642 HNRNPMP52272 730 aaKnown RBP eCLIP10.51□□□□□ -0.73
DEPDC4-210ENST00000551642 LCE2CQ5TA81 110 aa10.51□□□□□ -0.73
DEPDC4-210ENST00000551642 NWD1Q149M9 1564 aa10.51□□□□□ -0.73
DEPDC4-210ENST00000551642 EEA1Q15075 1411 aa10.5□□□□□ -0.73
DEPDC4-210ENST00000551642 SLIT1O75093 1534 aa10.5□□□□□ -0.73
DEPDC4-210ENST00000551642 TTLL8A6PVC2 850 aa10.5□□□□□ -0.73
DEPDC4-210ENST00000551642 SOBPA7XYQ1 873 aa10.5□□□□□ -0.73
DEPDC4-210ENST00000551642 ADH1AP07327 375 aa10.5□□□□□ -0.73
DEPDC4-210ENST00000551642 DNMT3LQ9UJW3 386 aa10.5□□□□□ -0.73
DEPDC4-210ENST00000551642 ADD1P35611 737 aaKnown RBP10.49□□□□□ -0.73
DEPDC4-210ENST00000551642 RAB15P59190 212 aa10.49□□□□□ -0.73
DEPDC4-210ENST00000551642 CLIP1P30622 1438 aa10.49□□□□□ -0.73
DEPDC4-210ENST00000551642 BCL9LQ86UU0 1499 aa10.49□□□□□ -0.73
DEPDC4-210ENST00000551642 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.48□□□□□ -0.73
DEPDC4-210ENST00000551642 IRF7Q92985 503 aa10.48□□□□□ -0.73
DEPDC4-210ENST00000551642 TBC1D2BQ9UPU7 963 aa10.48□□□□□ -0.73
DEPDC4-210ENST00000551642 MAST1Q9Y2H9 1570 aa10.48□□□□□ -0.73
DEPDC4-210ENST00000551642 PROSER2Q86WR7 435 aaPredicted RBP10.47□□□□□ -0.73
DEPDC4-210ENST00000551642 AGBL1Q96MI9 1066 aa10.47□□□□□ -0.73
DEPDC4-210ENST00000551642 UTRNP46939 3433 aa10.47□□□□□ -0.73
DEPDC4-210ENST00000551642 TET3O43151 1660 aa10.47□□□□□ -0.73
DEPDC4-210ENST00000551642 VSIG8P0DPA2 414 aa10.46□□□□□ -0.73
DEPDC4-210ENST00000551642 KCNA6P17658 529 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 1018.6 ms