RNA–Protein interactions for RNA: ENST00000551506.1

SLC38A1-209, Transcript of solute carrier family 38 member 1, humanhuman

TSL 3

Gene SLC38A1, Length 586 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-209ENST00000551506 COL15A1P39059 1388 aa23.97■■□□□ 1.43
SLC38A1-209ENST00000551506 DDR1Q08345 913 aa23.97■■□□□ 1.43
SLC38A1-209ENST00000551506 PXDNLA1KZ92 1463 aa23.96■■□□□ 1.43
SLC38A1-209ENST00000551506 EIF5P55010 431 aaKnown RBP23.95■■□□□ 1.42
SLC38A1-209ENST00000551506 USPL1Q5W0Q7 1092 aa23.95■■□□□ 1.42
SLC38A1-209ENST00000551506 RTF1Q92541 710 aaKnown RBP23.95■■□□□ 1.42
SLC38A1-209ENST00000551506 FMNL2Q96PY5 1086 aa23.95■■□□□ 1.42
SLC38A1-209ENST00000551506 BCL2L12Q9HB09 334 aa23.95■■□□□ 1.42
SLC38A1-209ENST00000551506 CANXP27824 592 aaKnown RBP23.94■■□□□ 1.42
SLC38A1-209ENST00000551506 TM4SF1P30408 202 aa23.94■■□□□ 1.42
SLC38A1-209ENST00000551506 NARFQ9UHQ1 456 aa23.94■■□□□ 1.42
SLC38A1-209ENST00000551506 N4BP2Q86UW6 1770 aaPredicted RBP23.93■■□□□ 1.42
SLC38A1-209ENST00000551506 MYBBP1AQ9BQG0 1328 aaKnown RBP23.93■■□□□ 1.42
SLC38A1-209ENST00000551506 STARD3NLO95772 234 aa23.93■■□□□ 1.42
SLC38A1-209ENST00000551506 WWC3Q9ULE0 1092 aa23.93■■□□□ 1.42
SLC38A1-209ENST00000551506 PARP3Q9Y6F1 533 aa23.93■■□□□ 1.42
SLC38A1-209ENST00000551506 PRAMEF22A3QJZ6 481 aa23.92■■□□□ 1.42
SLC38A1-209ENST00000551506 TEX13AQ9BXU3 409 aaPredicted RBP23.92■■□□□ 1.42
SLC38A1-209ENST00000551506 POLRMTO00411 1230 aaKnown RBP23.91■■□□□ 1.42
SLC38A1-209ENST00000551506 GRIN3BO60391 1043 aa23.91■■□□□ 1.42
SLC38A1-209ENST00000551506 ZPR1O75312 459 aa23.91■■□□□ 1.42
SLC38A1-209ENST00000551506 A1BGP04217 495 aa23.91■■□□□ 1.42
SLC38A1-209ENST00000551506 NFE2L2Q16236 605 aa23.91■■□□□ 1.42
SLC38A1-209ENST00000551506 ZNF784Q8NCA9 323 aaPredicted RBP23.91■■□□□ 1.42
SLC38A1-209ENST00000551506 USP16Q9Y5T5 823 aa23.9■■□□□ 1.42
SLC38A1-209ENST00000551506 TGFB2P61812 414 aa23.89■■□□□ 1.41
SLC38A1-209ENST00000551506 TAF7Q15545 349 aaPredicted RBP23.89■■□□□ 1.41
SLC38A1-209ENST00000551506 MIS18AQ9NYP9 233 aa23.89■■□□□ 1.41
SLC38A1-209ENST00000551506 KDM3BQ7LBC6 1761 aa23.88■■□□□ 1.41
SLC38A1-209ENST00000551506 BRCA1P38398 1863 aaKnown RBP23.88■■□□□ 1.41
SLC38A1-209ENST00000551506 NRXN2Q9P2S2 1712 aa23.88■■□□□ 1.41
SLC38A1-209ENST00000551506 A0A0G2JLW4 131 aa23.88■■□□□ 1.41
SLC38A1-209ENST00000551506 NFIXQ14938 502 aa23.88■■□□□ 1.41
SLC38A1-209ENST00000551506 THUMPD2Q9BTF0 503 aaKnown RBP23.88■■□□□ 1.41
SLC38A1-209ENST00000551506 AFDNP55196 1824 aaKnown RBP23.88■■□□□ 1.41
SLC38A1-209ENST00000551506 DPEP1P16444 411 aa23.87■■□□□ 1.41
SLC38A1-209ENST00000551506 KCNA3P22001 575 aa23.87■■□□□ 1.41
SLC38A1-209ENST00000551506 PRKRIP1Q9H875 184 aaPredicted RBP23.87■■□□□ 1.41
SLC38A1-209ENST00000551506 SCN7AQ01118 1682 aa23.86■■□□□ 1.41
SLC38A1-209ENST00000551506 NEFMP07197 916 aa23.86■■□□□ 1.41
SLC38A1-209ENST00000551506 IL6STP40189 918 aaPredicted RBP23.86■■□□□ 1.41
SLC38A1-209ENST00000551506 SNRPA1P09661 255 aaKnown RBP23.85■■□□□ 1.41
SLC38A1-209ENST00000551506 PNNQ9H307 717 aaKnown RBP23.85■■□□□ 1.41
SLC38A1-209ENST00000551506 MAPK8IP3Q9UPT6 1336 aa23.84■■□□□ 1.41
SLC38A1-209ENST00000551506 PIP4K2AP48426 406 aaPredicted RBP23.84■■□□□ 1.41
SLC38A1-209ENST00000551506 TBC1D2BQ9UPU7 963 aa23.84■■□□□ 1.41
SLC38A1-209ENST00000551506 A0A087WZG4 1122 aa23.83■■□□□ 1.41
SLC38A1-209ENST00000551506 ZEB1P37275 1124 aaPredicted RBP23.83■■□□□ 1.41
SLC38A1-209ENST00000551506 NBPF26B4DH59 902 aa23.82■■□□□ 1.4
SLC38A1-209ENST00000551506 NBPF10Q6P3W6 841 aaKnown RBP23.82■■□□□ 1.4
SLC38A1-209ENST00000551506 NBPF15Q8N660 670 aa23.82■■□□□ 1.4
SLC38A1-209ENST00000551506 BCORQ6W2J9 1755 aa23.81■■□□□ 1.4
SLC38A1-209ENST00000551506 CAMTA2O94983 1202 aa23.81■■□□□ 1.4
SLC38A1-209ENST00000551506 ZNF330Q9Y3S2 320 aaPredicted RBP23.81■■□□□ 1.4
SLC38A1-209ENST00000551506 TMPOP42166 694 aaKnown RBP23.8■■□□□ 1.4
SLC38A1-209ENST00000551506 TBC1D9BQ66K14 1250 aa23.8■■□□□ 1.4
SLC38A1-209ENST00000551506 LAMB4A4D0S4 1761 aa23.8■■□□□ 1.4
SLC38A1-209ENST00000551506 SERPINB2P05120 415 aa23.79■■□□□ 1.4
SLC38A1-209ENST00000551506 CHRNA5P30532 468 aa23.79■■□□□ 1.4
SLC38A1-209ENST00000551506 RIPK4P57078 832 aa23.79■■□□□ 1.4
SLC38A1-209ENST00000551506 EIF4A1P60842 406 aaKnown RBP23.79■■□□□ 1.4
SLC38A1-209ENST00000551506 CCDC146Q8IYE0 955 aa23.79■■□□□ 1.4
SLC38A1-209ENST00000551506 CARMIL3Q8ND23 1372 aa23.78■■□□□ 1.4
SLC38A1-209ENST00000551506 PNISRQ8TF01 805 aaKnown RBP23.78■■□□□ 1.4
SLC38A1-209ENST00000551506 BCS1LQ9Y276 419 aa23.78■■□□□ 1.4
SLC38A1-209ENST00000551506 ADCY9O60503 1353 aa23.78■■□□□ 1.4
SLC38A1-209ENST00000551506 GIGYF1O75420 1035 aaPredicted RBP23.77■■□□□ 1.4
SLC38A1-209ENST00000551506 BICDL1Q6ZP65 573 aa23.77■■□□□ 1.4
SLC38A1-209ENST00000551506 ADAMTS8Q9UP79 889 aa23.77■■□□□ 1.4
SLC38A1-209ENST00000551506 ARFGEF1Q9Y6D6 1849 aa23.77■■□□□ 1.4
SLC38A1-209ENST00000551506 DZIP3Q86Y13 1208 aaKnown RBP23.76■■□□□ 1.39
SLC38A1-209ENST00000551506 RRP7AQ9Y3A4 280 aaKnown RBP23.76■■□□□ 1.39
SLC38A1-209ENST00000551506 ANKRD31Q8N7Z5 1873 aa23.75■■□□□ 1.39
SLC38A1-209ENST00000551506 PIM2Q9P1W9 311 aa23.74■■□□□ 1.39
SLC38A1-209ENST00000551506 DLEC1Q9Y238 1755 aa23.73■■□□□ 1.39
SLC38A1-209ENST00000551506 WDR43Q15061 677 aaKnown RBP eCLIP23.73■■□□□ 1.39
SLC38A1-209ENST00000551506 RUNDC1Q96C34 613 aa23.73■■□□□ 1.39
SLC38A1-209ENST00000551506 TRIM35Q9UPQ4 493 aa23.73■■□□□ 1.39
SLC38A1-209ENST00000551506 ATP10DQ9P241 1426 aa23.73■■□□□ 1.39
SLC38A1-209ENST00000551506 PRR5LQ6MZQ0 368 aa23.71■■□□□ 1.39
SLC38A1-209ENST00000551506 NEUROD2Q15784 382 aa23.7■■□□□ 1.38
SLC38A1-209ENST00000551506 DALRD3Q5D0E6 543 aaKnown RBP23.7■■□□□ 1.38
SLC38A1-209ENST00000551506 CCDC24Q8N4L8 307 aa23.7■■□□□ 1.38
SLC38A1-209ENST00000551506 TSPYL4Q9UJ04 414 aa23.7■■□□□ 1.38
SLC38A1-209ENST00000551506 CCDC184Q52MB2 194 aa23.69■■□□□ 1.38
SLC38A1-209ENST00000551506 NPM2Q86SE8 214 aaKnown RBP23.69■■□□□ 1.38
SLC38A1-209ENST00000551506 LMOD3Q0VAK6 560 aa23.68■■□□□ 1.38
SLC38A1-209ENST00000551506 CLEC4GQ6UXB4 293 aa23.68■■□□□ 1.38
SLC38A1-209ENST00000551506 ARHGAP27Q6ZUM4 889 aa23.68■■□□□ 1.38
SLC38A1-209ENST00000551506 SETDB2Q96T68 719 aa23.68■■□□□ 1.38
SLC38A1-209ENST00000551506 BABAM1Q9NWV8 329 aa23.68■■□□□ 1.38
SLC38A1-209ENST00000551506 COL11A2P13942 1736 aaPredicted RBP23.67■■□□□ 1.38
SLC38A1-209ENST00000551506 ZNF316A6NFI3 1004 aaPredicted RBP23.66■■□□□ 1.38
SLC38A1-209ENST00000551506 RGL2O15211 777 aa23.66■■□□□ 1.38
SLC38A1-209ENST00000551506 HLFQ16534 295 aa23.66■■□□□ 1.38
SLC38A1-209ENST00000551506 C2CD5Q86YS7 1000 aa23.66■■□□□ 1.38
SLC38A1-209ENST00000551506 CHL1O00533 1208 aa23.65■■□□□ 1.38
SLC38A1-209ENST00000551506 LRP10Q7Z4F1 713 aa23.65■■□□□ 1.38
SLC38A1-209ENST00000551506 BRIP1Q9BX63 1249 aa23.65■■□□□ 1.38
SLC38A1-209ENST00000551506 TTLL7Q6ZT98 887 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 1691.3 ms