RNA–Protein interactions for RNA: ENST00000551339.5

PFKM-222, Transcript of phosphofructokinase, muscle, human

TSL 4

Gene PFKM, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-222	ENST00000551339	HEG1	Q9ULI3	1381 aa		12.84	□□□□□ -0.35
PFKM-222	ENST00000551339		A0A0G2JLW4	131 aa		12.84	□□□□□ -0.35
PFKM-222	ENST00000551339	BTBD11	A6QL63	1104 aa		12.84	□□□□□ -0.35
PFKM-222	ENST00000551339	HTATSF1	O43719	755 aa	Known RBP	12.84	□□□□□ -0.35
PFKM-222	ENST00000551339	ZPR1	O75312	459 aa		12.84	□□□□□ -0.35
PFKM-222	ENST00000551339	CANX	P27824	592 aa	Known RBP	12.84	□□□□□ -0.35
PFKM-222	ENST00000551339	DDR1	Q08345	913 aa		12.84	□□□□□ -0.35
PFKM-222	ENST00000551339	RTF1	Q92541	710 aa	Known RBP	12.84	□□□□□ -0.35
PFKM-222	ENST00000551339	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.84	□□□□□ -0.35
PFKM-222	ENST00000551339	NARF	Q9UHQ1	456 aa		12.84	□□□□□ -0.35
PFKM-222	ENST00000551339	C4A	P0C0L4	1744 aa		12.83	□□□□□ -0.36
PFKM-222	ENST00000551339	EIF5	P55010	431 aa	Known RBP	12.83	□□□□□ -0.36
PFKM-222	ENST00000551339	DCTN1	Q14203	1278 aa		12.83	□□□□□ -0.36
PFKM-222	ENST00000551339	FMNL2	Q96PY5	1086 aa		12.83	□□□□□ -0.36
PFKM-222	ENST00000551339	PLEKHF1	Q96S99	279 aa		12.83	□□□□□ -0.36
PFKM-222	ENST00000551339	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.83	□□□□□ -0.36
PFKM-222	ENST00000551339	UBR2	Q8IWV8	1755 aa		12.82	□□□□□ -0.36
PFKM-222	ENST00000551339	C10orf71	Q711Q0	1435 aa		12.82	□□□□□ -0.36
PFKM-222	ENST00000551339	POLRMT	O00411	1230 aa	Known RBP	12.82	□□□□□ -0.36
PFKM-222	ENST00000551339	DPEP1	P16444	411 aa		12.82	□□□□□ -0.36
PFKM-222	ENST00000551339	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.82	□□□□□ -0.36
PFKM-222	ENST00000551339	BCL2L12	Q9HB09	334 aa		12.82	□□□□□ -0.36
PFKM-222	ENST00000551339	PXDNL	A1KZ92	1463 aa		12.82	□□□□□ -0.36
PFKM-222	ENST00000551339	COL15A1	P39059	1388 aa		12.81	□□□□□ -0.36
PFKM-222	ENST00000551339	SIPA1L3	O60292	1781 aa	Predicted RBP	12.81	□□□□□ -0.36
PFKM-222	ENST00000551339	KCNA3	P22001	575 aa		12.81	□□□□□ -0.36
PFKM-222	ENST00000551339	NFIX	Q14938	502 aa		12.81	□□□□□ -0.36
PFKM-222	ENST00000551339		A0A087WZG4	1122 aa		12.8	□□□□□ -0.36
PFKM-222	ENST00000551339	A1BG	P04217	495 aa		12.8	□□□□□ -0.36
PFKM-222	ENST00000551339	USP16	Q9Y5T5	823 aa		12.8	□□□□□ -0.36
PFKM-222	ENST00000551339	KIF13B	Q9NQT8	1826 aa		12.8	□□□□□ -0.36
PFKM-222	ENST00000551339	GOLGB1	Q14789	3259 aa	Known RBP	12.8	□□□□□ -0.36
PFKM-222	ENST00000551339	PRAMEF22	A3QJZ6	481 aa		12.79	□□□□□ -0.36
PFKM-222	ENST00000551339	NEFM	P07197	916 aa		12.79	□□□□□ -0.36
PFKM-222	ENST00000551339	IL6ST	P40189	918 aa	Predicted RBP	12.79	□□□□□ -0.36
PFKM-222	ENST00000551339	TAF7	Q15545	349 aa	Predicted RBP	12.79	□□□□□ -0.36
PFKM-222	ENST00000551339	PNN	Q9H307	717 aa	Known RBP	12.79	□□□□□ -0.36
PFKM-222	ENST00000551339	BCS1L	Q9Y276	419 aa		12.79	□□□□□ -0.36
PFKM-222	ENST00000551339	NFE2L2	Q16236	605 aa		12.78	□□□□□ -0.36
PFKM-222	ENST00000551339	MIS18A	Q9NYP9	233 aa		12.78	□□□□□ -0.36
PFKM-222	ENST00000551339	TBC1D2B	Q9UPU7	963 aa		12.78	□□□□□ -0.36
PFKM-222	ENST00000551339	KIAA1551	Q9HCM1	1747 aa		12.78	□□□□□ -0.36
PFKM-222	ENST00000551339	CEP350	Q5VT06	3117 aa		12.77	□□□□□ -0.37
PFKM-222	ENST00000551339	SERPINB2	P05120	415 aa		12.77	□□□□□ -0.37
PFKM-222	ENST00000551339	SNRPA1	P09661	255 aa	Known RBP	12.77	□□□□□ -0.37
PFKM-222	ENST00000551339	PIM2	Q9P1W9	311 aa		12.77	□□□□□ -0.37
PFKM-222	ENST00000551339	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.76	□□□□□ -0.37
PFKM-222	ENST00000551339	CHRNA5	P30532	468 aa		12.76	□□□□□ -0.37
PFKM-222	ENST00000551339	TBC1D9B	Q66K14	1250 aa		12.76	□□□□□ -0.37
PFKM-222	ENST00000551339	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.76	□□□□□ -0.37
PFKM-222	ENST00000551339	GIGYF1	O75420	1035 aa	Predicted RBP	12.75	□□□□□ -0.37
PFKM-222	ENST00000551339	CAMTA2	O94983	1202 aa		12.75	□□□□□ -0.37
PFKM-222	ENST00000551339	PIP4K2A	P48426	406 aa	Predicted RBP	12.75	□□□□□ -0.37
PFKM-222	ENST00000551339	BICDL1	Q6ZP65	573 aa		12.75	□□□□□ -0.37
PFKM-222	ENST00000551339	ARHGAP27	Q6ZUM4	889 aa		12.75	□□□□□ -0.37
PFKM-222	ENST00000551339	THUMPD2	Q9BTF0	503 aa	Known RBP	12.75	□□□□□ -0.37
PFKM-222	ENST00000551339	ATP10D	Q9P241	1426 aa		12.74	□□□□□ -0.37
PFKM-222	ENST00000551339	ADCY9	O60503	1353 aa		12.74	□□□□□ -0.37
PFKM-222	ENST00000551339	MAPK8IP3	Q9UPT6	1336 aa		12.74	□□□□□ -0.37
PFKM-222	ENST00000551339	NBPF26	B4DH59	902 aa		12.74	□□□□□ -0.37
PFKM-222	ENST00000551339	DALRD3	Q5D0E6	543 aa	Known RBP	12.74	□□□□□ -0.37
PFKM-222	ENST00000551339	NBPF10	Q6P3W6	841 aa	Known RBP	12.74	□□□□□ -0.37
PFKM-222	ENST00000551339	NPM2	Q86SE8	214 aa	Known RBP	12.74	□□□□□ -0.37
PFKM-222	ENST00000551339	NBPF15	Q8N660	670 aa		12.74	□□□□□ -0.37
PFKM-222	ENST00000551339	PNISR	Q8TF01	805 aa	Known RBP	12.74	□□□□□ -0.37
PFKM-222	ENST00000551339	RIPK4	P57078	832 aa		12.73	□□□□□ -0.37
PFKM-222	ENST00000551339	DZIP3	Q86Y13	1208 aa	Known RBP	12.73	□□□□□ -0.37
PFKM-222	ENST00000551339	ANP32C	O43423	234 aa		12.72	□□□□□ -0.37
PFKM-222	ENST00000551339	TMPO	P42166	694 aa	Known RBP	12.72	□□□□□ -0.37
PFKM-222	ENST00000551339	EIF4A1	P60842	406 aa	Known RBP	12.72	□□□□□ -0.37
PFKM-222	ENST00000551339	NRXN2	Q9P2S2	1712 aa		12.71	□□□□□ -0.37
PFKM-222	ENST00000551339	WDR43	Q15061	677 aa	Known RBP eCLIP	12.71	□□□□□ -0.37
PFKM-222	ENST00000551339	PRR5L	Q6MZQ0	368 aa		12.71	□□□□□ -0.37
PFKM-222	ENST00000551339	CLEC4G	Q6UXB4	293 aa		12.71	□□□□□ -0.37
PFKM-222	ENST00000551339	C2CD5	Q86YS7	1000 aa		12.71	□□□□□ -0.37
PFKM-222	ENST00000551339	SETDB2	Q96T68	719 aa		12.71	□□□□□ -0.37
PFKM-222	ENST00000551339	BRIP1	Q9BX63	1249 aa		12.71	□□□□□ -0.37
PFKM-222	ENST00000551339	BRCA1	P38398	1863 aa	Known RBP	12.71	□□□□□ -0.37
PFKM-222	ENST00000551339	AFDN	P55196	1824 aa	Known RBP	12.71	□□□□□ -0.38
PFKM-222	ENST00000551339	CARMIL3	Q8ND23	1372 aa		12.7	□□□□□ -0.38
PFKM-222	ENST00000551339	DLG5	Q8TDM6	1919 aa		12.7	□□□□□ -0.38
PFKM-222	ENST00000551339		H0YIN7	160 aa		12.7	□□□□□ -0.38
PFKM-222	ENST00000551339	CCDC24	Q8N4L8	307 aa		12.7	□□□□□ -0.38
PFKM-222	ENST00000551339	ZNF526	Q8TF50	670 aa	Predicted RBP	12.7	□□□□□ -0.38
PFKM-222	ENST00000551339	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.7	□□□□□ -0.38
PFKM-222	ENST00000551339	CCDC146	Q8IYE0	955 aa		12.69	□□□□□ -0.38
PFKM-222	ENST00000551339	ADAMTS8	Q9UP79	889 aa		12.69	□□□□□ -0.38
PFKM-222	ENST00000551339	RGL2	O15211	777 aa		12.68	□□□□□ -0.38
PFKM-222	ENST00000551339	PDE6B	P35913	854 aa		12.68	□□□□□ -0.38
PFKM-222	ENST00000551339	C9orf131	Q5VYM1	1079 aa		12.68	□□□□□ -0.38
PFKM-222	ENST00000551339	TTLL6	Q8N841	843 aa		12.68	□□□□□ -0.38
PFKM-222	ENST00000551339	RUNDC1	Q96C34	613 aa		12.68	□□□□□ -0.38
PFKM-222	ENST00000551339	BABAM1	Q9NWV8	329 aa		12.68	□□□□□ -0.38
PFKM-222	ENST00000551339	TSPYL4	Q9UJ04	414 aa		12.68	□□□□□ -0.38
PFKM-222	ENST00000551339	PDZRN3	Q9UPQ7	1066 aa		12.68	□□□□□ -0.38
PFKM-222	ENST00000551339	RRP7A	Q9Y3A4	280 aa	Known RBP	12.68	□□□□□ -0.38
PFKM-222	ENST00000551339	SCN7A	Q01118	1682 aa		12.67	□□□□□ -0.38
PFKM-222	ENST00000551339	LMOD3	Q0VAK6	560 aa		12.67	□□□□□ -0.38
PFKM-222	ENST00000551339	NEUROD2	Q15784	382 aa		12.67	□□□□□ -0.38
PFKM-222	ENST00000551339	HLF	Q16534	295 aa		12.67	□□□□□ -0.38

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