RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 ONECUT3O60422 494 aaPredicted RBP17.99■□□□□ 0.47
LETMD1-229ENST00000551261 DDX58O95786 925 aaKnown RBP17.99■□□□□ 0.47
LETMD1-229ENST00000551261 SLC39A6Q13433 755 aa17.99■□□□□ 0.47
LETMD1-229ENST00000551261 FKBP5Q13451 457 aaPredicted RBP17.99■□□□□ 0.47
LETMD1-229ENST00000551261 B4GALNT3Q6L9W6 998 aa17.99■□□□□ 0.47
LETMD1-229ENST00000551261 ATP10DQ9P241 1426 aa17.98■□□□□ 0.47
LETMD1-229ENST00000551261 EIF2S2P20042 333 aaKnown RBP17.98■□□□□ 0.47
LETMD1-229ENST00000551261 ZNF772Q68DY9 489 aaPredicted RBP17.98■□□□□ 0.47
LETMD1-229ENST00000551261 CHPF2Q9P2E5 772 aa17.98■□□□□ 0.47
LETMD1-229ENST00000551261 TCERG1O14776 1098 aaKnown RBP17.97■□□□□ 0.47
LETMD1-229ENST00000551261 MARCH10Q8NA82 808 aaPredicted RBP17.97■□□□□ 0.47
LETMD1-229ENST00000551261 PIGBQ92521 554 aa17.97■□□□□ 0.47
LETMD1-229ENST00000551261 FBXO41Q8TF61 875 aa17.96■□□□□ 0.47
LETMD1-229ENST00000551261 SMARCC1Q92922 1105 aaPredicted RBP17.96■□□□□ 0.47
LETMD1-229ENST00000551261 ZBTB40Q9NUA8 1239 aa17.96■□□□□ 0.47
LETMD1-229ENST00000551261 TNNQ9UQP3 1299 aa17.96■□□□□ 0.47
LETMD1-229ENST00000551261 NHSQ6T4R5 1651 aa17.96■□□□□ 0.47
LETMD1-229ENST00000551261 HDAC5Q9UQL6 1122 aa17.94■□□□□ 0.46
LETMD1-229ENST00000551261 KDM2BQ8NHM5 1336 aa17.94■□□□□ 0.46
LETMD1-229ENST00000551261 A0A0G2JS52 829 aa17.93■□□□□ 0.46
LETMD1-229ENST00000551261 ZBTB7BO15156 539 aaPredicted RBP17.93■□□□□ 0.46
LETMD1-229ENST00000551261 MYT1Q01538 1121 aa17.93■□□□□ 0.46
LETMD1-229ENST00000551261 G2E3Q7L622 706 aa17.93■□□□□ 0.46
LETMD1-229ENST00000551261 RWDD1Q9H446 243 aaPredicted RBP17.93■□□□□ 0.46
LETMD1-229ENST00000551261 ATG3Q9NT62 314 aa17.93■□□□□ 0.46
LETMD1-229ENST00000551261 STARD3NLO95772 234 aa17.92■□□□□ 0.46
LETMD1-229ENST00000551261 GNAI3P08754 354 aa17.92■□□□□ 0.46
LETMD1-229ENST00000551261 PRIM1P49642 420 aaKnown RBP17.92■□□□□ 0.46
LETMD1-229ENST00000551261 HDAC1Q13547 482 aaPredicted RBP17.92■□□□□ 0.46
LETMD1-229ENST00000551261 PDIA6Q15084 440 aa17.92■□□□□ 0.46
LETMD1-229ENST00000551261 KSR2Q6VAB6 950 aa17.92■□□□□ 0.46
LETMD1-229ENST00000551261 DNAAF4Q8WXU2 420 aa17.92■□□□□ 0.46
LETMD1-229ENST00000551261 NECTIN2Q92692 538 aa17.92■□□□□ 0.46
LETMD1-229ENST00000551261 QTRT2Q9H974 415 aaKnown RBP17.91■□□□□ 0.46
LETMD1-229ENST00000551261 TJP1Q07157 1748 aa17.9■□□□□ 0.46
LETMD1-229ENST00000551261 ALDH1L1O75891 902 aa17.9■□□□□ 0.46
LETMD1-229ENST00000551261 HMGB2P26583 209 aaKnown RBP17.9■□□□□ 0.46
LETMD1-229ENST00000551261 SYTL4Q96C24 671 aaPredicted RBP17.9■□□□□ 0.46
LETMD1-229ENST00000551261 SRCIN1Q9C0H9 1055 aa17.9■□□□□ 0.46
LETMD1-229ENST00000551261 PHAXQ9H814 394 aaKnown RBP17.9■□□□□ 0.46
LETMD1-229ENST00000551261 ASAP1Q9ULH1 1129 aa17.9■□□□□ 0.46
LETMD1-229ENST00000551261 PTCD1O75127 700 aaKnown RBP17.89■□□□□ 0.45
LETMD1-229ENST00000551261 USP16Q9Y5T5 823 aa17.89■□□□□ 0.45
LETMD1-229ENST00000551261 ADCY9O60503 1353 aa17.89■□□□□ 0.45
LETMD1-229ENST00000551261 RREB1Q92766 1687 aa17.88■□□□□ 0.45
LETMD1-229ENST00000551261 PRAMEF22A3QJZ6 481 aa17.88■□□□□ 0.45
LETMD1-229ENST00000551261 PI4KAP2A4QPH2 592 aa17.88■□□□□ 0.45
LETMD1-229ENST00000551261 RBM6P78332 1123 aaKnown RBP17.88■□□□□ 0.45
LETMD1-229ENST00000551261 NEXNQ0ZGT2 675 aa17.88■□□□□ 0.45
LETMD1-229ENST00000551261 SLC4A10Q6U841 1118 aa17.88■□□□□ 0.45
LETMD1-229ENST00000551261 PI4KAP1Q8N8J0 262 aa17.88■□□□□ 0.45
LETMD1-229ENST00000551261 PALLDQ8WX93 1383 aa17.88■□□□□ 0.45
LETMD1-229ENST00000551261 LRP10Q7Z4F1 713 aa17.87■□□□□ 0.45
LETMD1-229ENST00000551261 RPAP2Q8IXW5 612 aaPredicted RBP17.87■□□□□ 0.45
LETMD1-229ENST00000551261 SEPT12Q8IYM1 358 aa17.87■□□□□ 0.45
LETMD1-229ENST00000551261 LINS1Q8NG48 757 aa17.87■□□□□ 0.45
LETMD1-229ENST00000551261 F6X3S4 739 aa17.86■□□□□ 0.45
LETMD1-229ENST00000551261 RBM42Q9BTD8 480 aaKnown RBP17.86■□□□□ 0.45
LETMD1-229ENST00000551261 PCDHB15Q9Y5E8 787 aa17.86■□□□□ 0.45
LETMD1-229ENST00000551261 PROSER3Q2NL68 480 aa17.85■□□□□ 0.45
LETMD1-229ENST00000551261 BEND3Q5T5X7 828 aa17.85■□□□□ 0.45
LETMD1-229ENST00000551261 PLBD2Q8NHP8 589 aa17.85■□□□□ 0.45
LETMD1-229ENST00000551261 MAP3K2Q9Y2U5 619 aa17.85■□□□□ 0.45
LETMD1-229ENST00000551261 ARFGEF2Q9Y6D5 1785 aa17.85■□□□□ 0.45
LETMD1-229ENST00000551261 NUP188Q5SRE5 1749 aa17.84■□□□□ 0.45
LETMD1-229ENST00000551261 HMMRO75330 724 aa17.84■□□□□ 0.45
LETMD1-229ENST00000551261 GNAI2P04899 355 aa17.84■□□□□ 0.45
LETMD1-229ENST00000551261 MYL6BP14649 208 aa17.84■□□□□ 0.45
LETMD1-229ENST00000551261 ANKRD13DQ6ZTN6 518 aa17.84■□□□□ 0.45
LETMD1-229ENST00000551261 RIC3Q7Z5B4 369 aa17.84■□□□□ 0.45
LETMD1-229ENST00000551261 XAGE3Q8WTP9 111 aa17.84■□□□□ 0.45
LETMD1-229ENST00000551261 GCC1Q96CN9 775 aa17.84■□□□□ 0.45
LETMD1-229ENST00000551261 BTAF1O14981 1849 aa17.84■□□□□ 0.45
LETMD1-229ENST00000551261 SBF2Q86WG5 1849 aa17.84■□□□□ 0.45
LETMD1-229ENST00000551261 COL5A3P25940 1745 aaPredicted RBP17.84■□□□□ 0.45
LETMD1-229ENST00000551261 LOC102724428A0A0B4J2F2 783 aa17.83■□□□□ 0.44
LETMD1-229ENST00000551261 SIK1P57059 783 aa17.83■□□□□ 0.44
LETMD1-229ENST00000551261 COPS6Q7L5N1 327 aa17.83■□□□□ 0.44
LETMD1-229ENST00000551261 ACSBG1Q96GR2 724 aa17.83■□□□□ 0.44
LETMD1-229ENST00000551261 METTL22Q9BUU2 404 aaPredicted RBP17.83■□□□□ 0.44
LETMD1-229ENST00000551261 ANXA1P04083 346 aa17.82■□□□□ 0.44
LETMD1-229ENST00000551261 UBTFL1P0CB47 393 aaPredicted RBP17.82■□□□□ 0.44
LETMD1-229ENST00000551261 CYP19A1P11511 503 aaPredicted RBP17.82■□□□□ 0.44
LETMD1-229ENST00000551261 IL6STP40189 918 aaPredicted RBP17.82■□□□□ 0.44
LETMD1-229ENST00000551261 FAM196AQ6ZSG2 479 aa17.82■□□□□ 0.44
LETMD1-229ENST00000551261 NPM2Q86SE8 214 aaKnown RBP17.82■□□□□ 0.44
LETMD1-229ENST00000551261 ILDR1Q86SU0 546 aaPredicted RBP17.82■□□□□ 0.44
LETMD1-229ENST00000551261 DNAJC10Q8IXB1 793 aa17.82■□□□□ 0.44
LETMD1-229ENST00000551261 NBPF26B4DH59 902 aa17.81■□□□□ 0.44
LETMD1-229ENST00000551261 NBPF14Q5TI25 921 aa17.81■□□□□ 0.44
LETMD1-229ENST00000551261 NBPF10Q6P3W6 841 aaKnown RBP17.81■□□□□ 0.44
LETMD1-229ENST00000551261 KRT27Q7Z3Y8 459 aa17.81■□□□□ 0.44
LETMD1-229ENST00000551261 NBPF15Q8N660 670 aa17.81■□□□□ 0.44
LETMD1-229ENST00000551261 ANKRD44Q8N8A2 993 aa17.81■□□□□ 0.44
LETMD1-229ENST00000551261 MEIS3Q99687 375 aa17.81■□□□□ 0.44
LETMD1-229ENST00000551261 COL15A1P39059 1388 aa17.8■□□□□ 0.44
LETMD1-229ENST00000551261 UTYO14607 1347 aa17.8■□□□□ 0.44
LETMD1-229ENST00000551261 KAT6BQ8WYB5 2073 aa17.8■□□□□ 0.44
LETMD1-229ENST00000551261 RGL2O15211 777 aa17.8■□□□□ 0.44
LETMD1-229ENST00000551261 KIF6Q6ZMV9 814 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms