RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 EFCAB5A4FU69 1503 aa6.61□□□□□ -1.35
LSM3P2-201ENST00000551246 RANGAP1P46060 587 aaPredicted RBP6.61□□□□□ -1.35
LSM3P2-201ENST00000551246 DUSP27Q5VZP5 1158 aa6.61□□□□□ -1.35
LSM3P2-201ENST00000551246 WWC1Q8IX03 1113 aa6.61□□□□□ -1.35
LSM3P2-201ENST00000551246 SLC10A4Q96EP9 437 aa6.61□□□□□ -1.35
LSM3P2-201ENST00000551246 ZKSCAN5Q9Y2L8 839 aa6.61□□□□□ -1.35
LSM3P2-201ENST00000551246 R3HCC1Q9Y3T6 440 aaKnown RBP6.61□□□□□ -1.35
LSM3P2-201ENST00000551246 PCDHB9Q9Y5E1 797 aa6.61□□□□□ -1.35
LSM3P2-201ENST00000551246 SNAPC4Q5SXM2 1469 aa6.6□□□□□ -1.35
LSM3P2-201ENST00000551246 RALGAPBQ86X10 1494 aa6.6□□□□□ -1.35
LSM3P2-201ENST00000551246 USP47Q96K76 1375 aa6.6□□□□□ -1.35
LSM3P2-201ENST00000551246 TULP2O00295 520 aa6.6□□□□□ -1.35
LSM3P2-201ENST00000551246 SOX11P35716 441 aa6.6□□□□□ -1.35
LSM3P2-201ENST00000551246 TNNT2P45379 298 aaPredicted RBP6.6□□□□□ -1.35
LSM3P2-201ENST00000551246 HMGN5P82970 282 aaKnown RBP6.6□□□□□ -1.35
LSM3P2-201ENST00000551246 RAB3GAP1Q15042 981 aa6.6□□□□□ -1.35
LSM3P2-201ENST00000551246 RGS22Q8NE09 1264 aa6.6□□□□□ -1.35
LSM3P2-201ENST00000551246 SLKQ9H2G2 1235 aaPredicted RBP6.6□□□□□ -1.35
LSM3P2-201ENST00000551246 C1orf115Q9H7X2 142 aa6.6□□□□□ -1.35
LSM3P2-201ENST00000551246 PRDM10Q9NQV6 1147 aa6.6□□□□□ -1.35
LSM3P2-201ENST00000551246 KDM6BO15054 1643 aa6.6□□□□□ -1.35
LSM3P2-201ENST00000551246 EPRSP07814 1512 aaKnown RBP6.6□□□□□ -1.35
LSM3P2-201ENST00000551246 ROCK1Q13464 1354 aa6.59□□□□□ -1.35
LSM3P2-201ENST00000551246 MTUS2Q5JR59 1369 aa6.59□□□□□ -1.35
LSM3P2-201ENST00000551246 IGHDP01880 384 aa6.59□□□□□ -1.35
LSM3P2-201ENST00000551246 GRM5P41594 1212 aa6.59□□□□□ -1.35
LSM3P2-201ENST00000551246 ATP2B3Q16720 1220 aa6.59□□□□□ -1.35
LSM3P2-201ENST00000551246 DZIP3Q86Y13 1208 aaKnown RBP6.59□□□□□ -1.35
LSM3P2-201ENST00000551246 SNIP1Q8TAD8 396 aaKnown RBP6.59□□□□□ -1.35
LSM3P2-201ENST00000551246 GLMNQ92990 594 aa6.59□□□□□ -1.35
LSM3P2-201ENST00000551246 GZF1Q9H116 711 aaPredicted RBP6.59□□□□□ -1.35
LSM3P2-201ENST00000551246 UGGT2Q9NYU1 1516 aa6.59□□□□□ -1.35
LSM3P2-201ENST00000551246 NINLQ9Y2I6 1382 aa6.58□□□□□ -1.36
LSM3P2-201ENST00000551246 J3QL48 77 aa6.58□□□□□ -1.36
LSM3P2-201ENST00000551246 ADH1CP00326 375 aa6.58□□□□□ -1.36
LSM3P2-201ENST00000551246 SMPD1P17405 629 aa6.58□□□□□ -1.36
LSM3P2-201ENST00000551246 BRD2P25440 801 aaKnown RBP6.58□□□□□ -1.36
LSM3P2-201ENST00000551246 MCCD1P59942 119 aaPredicted RBP6.58□□□□□ -1.36
LSM3P2-201ENST00000551246 PHTF2Q8N3S3 785 aa6.58□□□□□ -1.36
LSM3P2-201ENST00000551246 PRIMPOLQ96LW4 560 aa6.58□□□□□ -1.36
LSM3P2-201ENST00000551246 UCN2Q96RP3 112 aa6.58□□□□□ -1.36
LSM3P2-201ENST00000551246 CEP126Q9P2H0 1117 aa6.58□□□□□ -1.36
LSM3P2-201ENST00000551246 CDV3Q9UKY7 258 aaKnown RBP6.58□□□□□ -1.36
LSM3P2-201ENST00000551246 ZNF777Q9ULD5 760 aaPredicted RBP6.58□□□□□ -1.36
LSM3P2-201ENST00000551246 ATAD2BQ9ULI0 1458 aa6.58□□□□□ -1.36
LSM3P2-201ENST00000551246 KIF14Q15058 1648 aa6.58□□□□□ -1.36
LSM3P2-201ENST00000551246 NPC1L1Q9UHC9 1359 aa6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 NR3C2P08235 984 aa6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 FSHRP23945 695 aa6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 NASPP49321 788 aaPredicted RBP6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 FAM193AP78312 1265 aa6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 GABPB1Q06547 395 aaPredicted RBP6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 PDE3AQ14432 1141 aa6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 KLHL40Q2TBA0 621 aa6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 NBPF20Q3BBV1 942 aa6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 INTS6LQ5JSJ4 861 aaKnown RBP6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 VASH1Q7L8A9 365 aaPredicted RBP6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 ANKRD7Q92527 254 aa6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 ANP32BQ92688 251 aaKnown RBP6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 TNPO1Q92973 898 aaKnown RBP6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 KCTD15Q96SI1 283 aaPredicted RBP6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 YY1AP1Q9H869 796 aa6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 PANK3Q9H999 370 aa6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 CHIC2Q9UKJ5 165 aa6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 PDZRN3Q9UPQ7 1066 aa6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 PLEKHH1Q9ULM0 1364 aa6.57□□□□□ -1.36
LSM3P2-201ENST00000551246 CGNL1Q0VF96 1302 aa6.56□□□□□ -1.36
LSM3P2-201ENST00000551246 ARID3CA6NKF2 412 aa6.56□□□□□ -1.36
LSM3P2-201ENST00000551246 GIGYF1O75420 1035 aaPredicted RBP6.56□□□□□ -1.36
LSM3P2-201ENST00000551246 ALDH1A1P00352 501 aa6.56□□□□□ -1.36
LSM3P2-201ENST00000551246 MSNP26038 577 aaKnown RBP6.56□□□□□ -1.36
LSM3P2-201ENST00000551246 SLFN5Q08AF3 891 aa6.56□□□□□ -1.36
LSM3P2-201ENST00000551246 HDGFL1Q5TGJ6 251 aa6.56□□□□□ -1.36
LSM3P2-201ENST00000551246 CYP4X1Q8N118 509 aa6.56□□□□□ -1.36
LSM3P2-201ENST00000551246 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.56□□□□□ -1.36
LSM3P2-201ENST00000551246 ZNF592Q92610 1267 aa6.56□□□□□ -1.36
LSM3P2-201ENST00000551246 FEZ1Q99689 392 aa6.56□□□□□ -1.36
LSM3P2-201ENST00000551246 YEATS2Q9ULM3 1422 aa6.56□□□□□ -1.36
LSM3P2-201ENST00000551246 CAMSAP2Q08AD1 1489 aa6.55□□□□□ -1.36
LSM3P2-201ENST00000551246 GRIN2BQ13224 1484 aa6.55□□□□□ -1.36
LSM3P2-201ENST00000551246 PIK3CDO00329 1044 aa6.55□□□□□ -1.36
LSM3P2-201ENST00000551246 SLFN14P0C7P3 912 aa6.55□□□□□ -1.36
LSM3P2-201ENST00000551246 SEMA3FQ13275 785 aa6.55□□□□□ -1.36
LSM3P2-201ENST00000551246 ARID5BQ14865 1188 aa6.55□□□□□ -1.36
LSM3P2-201ENST00000551246 NBPF1Q3BBV0 1214 aa6.55□□□□□ -1.36
LSM3P2-201ENST00000551246 SEPT12Q8IYM1 358 aa6.55□□□□□ -1.36
LSM3P2-201ENST00000551246 SECISBP2LQ93073 1101 aaKnown RBP6.55□□□□□ -1.36
LSM3P2-201ENST00000551246 SPTLC3Q9NUV7 552 aa6.55□□□□□ -1.36
LSM3P2-201ENST00000551246 FAM53CQ9NYF3 392 aa6.55□□□□□ -1.36
LSM3P2-201ENST00000551246 SAMD9Q5K651 1589 aa6.55□□□□□ -1.36
LSM3P2-201ENST00000551246 CARMIL1Q5VZK9 1371 aa6.55□□□□□ -1.36
LSM3P2-201ENST00000551246 EHBP1L1Q8N3D4 1523 aa6.55□□□□□ -1.36
LSM3P2-201ENST00000551246 ABCC2Q92887 1545 aa6.55□□□□□ -1.36
LSM3P2-201ENST00000551246 ARHGEF12Q9NZN5 1544 aa6.55□□□□□ -1.36
LSM3P2-201ENST00000551246 PZPP20742 1482 aa6.54□□□□□ -1.36
LSM3P2-201ENST00000551246 TTC24A2A3L6 582 aaPredicted RBP6.54□□□□□ -1.36
LSM3P2-201ENST00000551246 NRG2O14511 850 aaPredicted RBP6.54□□□□□ -1.36
LSM3P2-201ENST00000551246 CTIFO43310 598 aaKnown RBP6.54□□□□□ -1.36
LSM3P2-201ENST00000551246 XPCQ01831 940 aaPredicted RBP6.54□□□□□ -1.36
LSM3P2-201ENST00000551246 NR5A1Q13285 461 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms