RNA–Protein interactions for RNA: ENST00000551219.5

PTPRR-211, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 2,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-211ENST00000551219 RBM27Q9P2N5 1060 aaKnown RBP8.11□□□□□ -1.11
PTPRR-211ENST00000551219 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.1□□□□□ -1.11
PTPRR-211ENST00000551219 DYNC1I1O14576 645 aa8.1□□□□□ -1.11
PTPRR-211ENST00000551219 GNAI3P08754 354 aa8.1□□□□□ -1.11
PTPRR-211ENST00000551219 UVSSAQ2YD98 709 aa8.1□□□□□ -1.11
PTPRR-211ENST00000551219 ZFP91Q96JP5 570 aaPredicted RBP8.1□□□□□ -1.11
PTPRR-211ENST00000551219 ZRANB1Q9UGI0 708 aa8.1□□□□□ -1.11
PTPRR-211ENST00000551219 NALCNQ8IZF0 1738 aa8.1□□□□□ -1.11
PTPRR-211ENST00000551219 PXDNLA1KZ92 1463 aa8.1□□□□□ -1.11
PTPRR-211ENST00000551219 SYCE3A1L190 88 aa8.1□□□□□ -1.11
PTPRR-211ENST00000551219 SASS6Q6UVJ0 657 aa8.1□□□□□ -1.11
PTPRR-211ENST00000551219 OSCARQ8IYS5 282 aa8.1□□□□□ -1.11
PTPRR-211ENST00000551219 AK7Q96M32 723 aa8.1□□□□□ -1.11
PTPRR-211ENST00000551219 LRRCC1Q9C099 1032 aa8.1□□□□□ -1.11
PTPRR-211ENST00000551219 STAP2Q9UGK3 403 aa8.1□□□□□ -1.11
PTPRR-211ENST00000551219 R3HCC1Q9Y3T6 440 aaKnown RBP8.1□□□□□ -1.11
PTPRR-211ENST00000551219 USP31Q70CQ4 1352 aa8.1□□□□□ -1.11
PTPRR-211ENST00000551219 HDGFP51858 240 aaKnown RBP8.1□□□□□ -1.11
PTPRR-211ENST00000551219 WDR33Q9C0J8 1336 aaKnown RBP8.1□□□□□ -1.11
PTPRR-211ENST00000551219 LETM1O95202 739 aaPredicted RBP8.09□□□□□ -1.11
PTPRR-211ENST00000551219 MX1P20591 662 aa8.09□□□□□ -1.11
PTPRR-211ENST00000551219 TMEM87AQ8NBN3 555 aa8.09□□□□□ -1.11
PTPRR-211ENST00000551219 TOPAZ1Q8N9V7 1692 aa8.09□□□□□ -1.11
PTPRR-211ENST00000551219 TUBGCP6Q96RT7 1819 aa8.09□□□□□ -1.11
PTPRR-211ENST00000551219 METP08581 1390 aa8.09□□□□□ -1.11
PTPRR-211ENST00000551219 UQCRHLA0A096LP55 91 aa8.08□□□□□ -1.12
PTPRR-211ENST00000551219 TRIM66O15016 1216 aa8.08□□□□□ -1.12
PTPRR-211ENST00000551219 HTATSF1O43719 755 aaKnown RBP8.08□□□□□ -1.12
PTPRR-211ENST00000551219 UQCRHP07919 91 aa8.08□□□□□ -1.12
PTPRR-211ENST00000551219 CHMLP26374 656 aa8.08□□□□□ -1.12
PTPRR-211ENST00000551219 KIAA2012Q0VF49 1180 aa8.08□□□□□ -1.12
PTPRR-211ENST00000551219 KRT24Q2M2I5 525 aa8.08□□□□□ -1.12
PTPRR-211ENST00000551219 MCM10Q7L590 875 aa8.08□□□□□ -1.12
PTPRR-211ENST00000551219 STK31Q9BXU1 1019 aa8.08□□□□□ -1.12
PTPRR-211ENST00000551219 N4BP2Q86UW6 1770 aaPredicted RBP8.08□□□□□ -1.12
PTPRR-211ENST00000551219 XPCQ01831 940 aaPredicted RBP8.08□□□□□ -1.12
PTPRR-211ENST00000551219 RTF1Q92541 710 aaKnown RBP8.08□□□□□ -1.12
PTPRR-211ENST00000551219 LRRC37A3O60309 1634 aa8.08□□□□□ -1.12
PTPRR-211ENST00000551219 ATP8B2P98198 1209 aa8.07□□□□□ -1.12
PTPRR-211ENST00000551219 TSPYL4Q9UJ04 414 aa8.07□□□□□ -1.12
PTPRR-211ENST00000551219 PEAK1Q9H792 1746 aa8.07□□□□□ -1.12
PTPRR-211ENST00000551219 PTMAP06454 111 aaKnown RBP8.07□□□□□ -1.12
PTPRR-211ENST00000551219 ANO2Q9NQ90 1003 aa8.07□□□□□ -1.12
PTPRR-211ENST00000551219 BABAM1Q9NWV8 329 aa8.07□□□□□ -1.12
PTPRR-211ENST00000551219 USP6P35125 1406 aa8.07□□□□□ -1.12
PTPRR-211ENST00000551219 KDRP35968 1356 aa8.07□□□□□ -1.12
PTPRR-211ENST00000551219 CCDC183Q5T5S1 534 aa8.07□□□□□ -1.12
PTPRR-211ENST00000551219 CCDC30Q5VVM6 783 aa8.07□□□□□ -1.12
PTPRR-211ENST00000551219 SLC4A10Q6U841 1118 aa8.07□□□□□ -1.12
PTPRR-211ENST00000551219 TXNDC2Q86VQ3 553 aa8.07□□□□□ -1.12
PTPRR-211ENST00000551219 NSFL1CQ9UNZ2 370 aaKnown RBP8.07□□□□□ -1.12
PTPRR-211ENST00000551219 FAM208AQ9UK61 1670 aaKnown RBP8.06□□□□□ -1.12
PTPRR-211ENST00000551219 TTC21AQ8NDW8 1320 aa8.06□□□□□ -1.12
PTPRR-211ENST00000551219 PRR36Q9H6K5 1346 aa8.06□□□□□ -1.12
PTPRR-211ENST00000551219 XRN1Q8IZH2 1706 aaKnown RBP8.06□□□□□ -1.12
PTPRR-211ENST00000551219 AK9Q5TCS8 1911 aa8.06□□□□□ -1.12
PTPRR-211ENST00000551219 RAB11FIP3O75154 756 aa8.06□□□□□ -1.12
PTPRR-211ENST00000551219 SBNO1A3KN83 1393 aa8.06□□□□□ -1.12
PTPRR-211ENST00000551219 TRIM6-TRIM34B2RNG4 842 aa8.06□□□□□ -1.12
PTPRR-211ENST00000551219 HSPA4P34932 840 aa8.06□□□□□ -1.12
PTPRR-211ENST00000551219 PRIMPOLQ96LW4 560 aa8.06□□□□□ -1.12
PTPRR-211ENST00000551219 EXOC6BQ9Y2D4 811 aa8.06□□□□□ -1.12
PTPRR-211ENST00000551219 HMGN5P82970 282 aaKnown RBP8.05□□□□□ -1.12
PTPRR-211ENST00000551219 PALD1Q9ULE6 856 aa8.05□□□□□ -1.12
PTPRR-211ENST00000551219 ATP6V1DQ9Y5K8 247 aa8.05□□□□□ -1.12
PTPRR-211ENST00000551219 FLT4P35916 1363 aa8.05□□□□□ -1.12
PTPRR-211ENST00000551219 RPAP1Q9BWH6 1393 aaPredicted RBP8.05□□□□□ -1.12
PTPRR-211ENST00000551219 FMN2Q9NZ56 1722 aa8.05□□□□□ -1.12
PTPRR-211ENST00000551219 FLIIQ13045 1269 aa8.05□□□□□ -1.12
PTPRR-211ENST00000551219 G2E3Q7L622 706 aa8.05□□□□□ -1.12
PTPRR-211ENST00000551219 ARHGEF1Q92888 912 aaKnown RBP8.05□□□□□ -1.12
PTPRR-211ENST00000551219 RILPL2Q969X0 211 aa8.05□□□□□ -1.12
PTPRR-211ENST00000551219 F6X3S4 739 aa8.04□□□□□ -1.12
PTPRR-211ENST00000551219 RNF214Q8ND24 703 aa8.04□□□□□ -1.12
PTPRR-211ENST00000551219 FAM13BQ9NYF5 915 aa8.04□□□□□ -1.12
PTPRR-211ENST00000551219 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.04□□□□□ -1.12
PTPRR-211ENST00000551219 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.04□□□□□ -1.12
PTPRR-211ENST00000551219 ACEP12821 1306 aa8.04□□□□□ -1.12
PTPRR-211ENST00000551219 MAP3K19Q56UN5 1328 aa8.04□□□□□ -1.12
PTPRR-211ENST00000551219 RAD50Q92878 1312 aa8.04□□□□□ -1.12
PTPRR-211ENST00000551219 TPM3P06753 285 aa8.04□□□□□ -1.12
PTPRR-211ENST00000551219 UBE2HP62256 183 aa8.04□□□□□ -1.12
PTPRR-211ENST00000551219 MTHFSDQ2M296 383 aaKnown RBP8.04□□□□□ -1.12
PTPRR-211ENST00000551219 USP48Q86UV5 1035 aa8.04□□□□□ -1.12
PTPRR-211ENST00000551219 MYRIPQ8NFW9 859 aa8.04□□□□□ -1.12
PTPRR-211ENST00000551219 PIBF1Q8WXW3 757 aa8.04□□□□□ -1.12
PTPRR-211ENST00000551219 IGSF1Q8N6C5 1336 aa8.04□□□□□ -1.12
PTPRR-211ENST00000551219 PTPRUQ92729 1446 aa8.04□□□□□ -1.12
PTPRR-211ENST00000551219 RBM10P98175 930 aaKnown RBP8.04□□□□□ -1.12
PTPRR-211ENST00000551219 HSP90AB2PQ58FF8 381 aa8.04□□□□□ -1.12
PTPRR-211ENST00000551219 NCKAP5LQ9HCH0 1330 aa8.03□□□□□ -1.12
PTPRR-211ENST00000551219 UNCXA6NJT0 531 aa8.03□□□□□ -1.12
PTPRR-211ENST00000551219 ZSCAN22P10073 491 aaPredicted RBP8.03□□□□□ -1.12
PTPRR-211ENST00000551219 FKBP5Q13451 457 aaPredicted RBP8.03□□□□□ -1.12
PTPRR-211ENST00000551219 SSH3Q8TE77 659 aa8.03□□□□□ -1.12
PTPRR-211ENST00000551219 ROBO2Q9HCK4 1378 aa8.03□□□□□ -1.12
PTPRR-211ENST00000551219 PNMA6EA0A0J9YXQ4 647 aa8.03□□□□□ -1.12
PTPRR-211ENST00000551219 SMAP1Q8IYB5 467 aaPredicted RBP8.03□□□□□ -1.12
PTPRR-211ENST00000551219 CCDC97Q96F63 343 aaPredicted RBP8.03□□□□□ -1.12
PTPRR-211ENST00000551219 MAP3K5Q99683 1374 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms