RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 PI4KAP1Q8N8J0 262 aa17.98■□□□□ 0.47
SCN8A-207ENST00000551216 OSBPL3Q9H4L5 887 aa17.98■□□□□ 0.47
SCN8A-207ENST00000551216 ERBB4Q15303 1308 aa17.98■□□□□ 0.47
SCN8A-207ENST00000551216 SNRPA1P09661 255 aaKnown RBP17.98■□□□□ 0.47
SCN8A-207ENST00000551216 TTC5Q8N0Z6 440 aa17.98■□□□□ 0.47
SCN8A-207ENST00000551216 FMNL2Q96PY5 1086 aa17.98■□□□□ 0.47
SCN8A-207ENST00000551216 C5P01031 1676 aa17.97■□□□□ 0.47
SCN8A-207ENST00000551216 SSH3Q8TE77 659 aa17.97■□□□□ 0.47
SCN8A-207ENST00000551216 ROBO1Q9Y6N7 1651 aa17.97■□□□□ 0.47
SCN8A-207ENST00000551216 CABP4P57796 275 aa17.96■□□□□ 0.47
SCN8A-207ENST00000551216 UBR2Q8IWV8 1755 aa17.96■□□□□ 0.47
SCN8A-207ENST00000551216 RAB11FIP3O75154 756 aa17.95■□□□□ 0.46
SCN8A-207ENST00000551216 EVA1CP58658 441 aa17.95■□□□□ 0.46
SCN8A-207ENST00000551216 TTC22Q5TAA0 569 aa17.95■□□□□ 0.46
SCN8A-207ENST00000551216 LRRFIP2Q9Y608 721 aaKnown RBP17.95■□□□□ 0.46
SCN8A-207ENST00000551216 SHANK3Q9BYB0 1731 aa17.95■□□□□ 0.46
SCN8A-207ENST00000551216 LTBP4Q8N2S1 1624 aa17.95■□□□□ 0.46
SCN8A-207ENST00000551216 CDC45O75419 566 aa17.94■□□□□ 0.46
SCN8A-207ENST00000551216 MTX1Q13505 466 aa17.94■□□□□ 0.46
SCN8A-207ENST00000551216 LINS1Q8NG48 757 aa17.94■□□□□ 0.46
SCN8A-207ENST00000551216 C22orf23Q9BZE7 217 aa17.94■□□□□ 0.46
SCN8A-207ENST00000551216 PAPPAQ13219 1627 aa17.94■□□□□ 0.46
SCN8A-207ENST00000551216 RBM25P49756 843 aaKnown RBP17.94■□□□□ 0.46
SCN8A-207ENST00000551216 POLA2Q14181 598 aa17.94■□□□□ 0.46
SCN8A-207ENST00000551216 PDIA6Q15084 440 aa17.94■□□□□ 0.46
SCN8A-207ENST00000551216 HSP90AB4PQ58FF6 505 aa17.94■□□□□ 0.46
SCN8A-207ENST00000551216 LRRCC1Q9C099 1032 aa17.94■□□□□ 0.46
SCN8A-207ENST00000551216 UTYO14607 1347 aa17.93■□□□□ 0.46
SCN8A-207ENST00000551216 LARP1Q6PKG0 1096 aaKnown RBP17.93■□□□□ 0.46
SCN8A-207ENST00000551216 ZNF496Q96IT1 587 aaPredicted RBP17.93■□□□□ 0.46
SCN8A-207ENST00000551216 MAP3K2Q9Y2U5 619 aa17.93■□□□□ 0.46
SCN8A-207ENST00000551216 PLCH1Q4KWH8 1693 aa17.92■□□□□ 0.46
SCN8A-207ENST00000551216 AOX1Q06278 1338 aa17.92■□□□□ 0.46
SCN8A-207ENST00000551216 SLC39A6Q13433 755 aa17.91■□□□□ 0.46
SCN8A-207ENST00000551216 GLI3P10071 1580 aa17.91■□□□□ 0.46
SCN8A-207ENST00000551216 PNMA6EA0A0J9YXQ4 647 aa17.9■□□□□ 0.46
SCN8A-207ENST00000551216 CASC1Q6TDU7 716 aa17.9■□□□□ 0.46
SCN8A-207ENST00000551216 MFAP1P55081 439 aaKnown RBP17.9■□□□□ 0.46
SCN8A-207ENST00000551216 NEXNQ0ZGT2 675 aa17.9■□□□□ 0.46
SCN8A-207ENST00000551216 PROSER3Q2NL68 480 aa17.9■□□□□ 0.46
SCN8A-207ENST00000551216 GSPT1P15170 499 aaKnown RBP17.89■□□□□ 0.45
SCN8A-207ENST00000551216 TBC1D9Q6ZT07 1266 aa17.89■□□□□ 0.45
SCN8A-207ENST00000551216 C9orf78Q9NZ63 289 aaPredicted RBP17.89■□□□□ 0.45
SCN8A-207ENST00000551216 STAP2Q9UGK3 403 aa17.89■□□□□ 0.45
SCN8A-207ENST00000551216 TNS2Q63HR2 1409 aa17.89■□□□□ 0.45
SCN8A-207ENST00000551216 SALL3Q9BXA9 1300 aa17.89■□□□□ 0.45
SCN8A-207ENST00000551216 LRP6O75581 1613 aa17.88■□□□□ 0.45
SCN8A-207ENST00000551216 PRAMEF22A3QJZ6 481 aa17.88■□□□□ 0.45
SCN8A-207ENST00000551216 NBPF7P0C2Y1 421 aaPredicted RBP17.88■□□□□ 0.45
SCN8A-207ENST00000551216 PPP1R42Q7Z4L9 355 aa17.88■□□□□ 0.45
SCN8A-207ENST00000551216 COL15A1P39059 1388 aa17.88■□□□□ 0.45
SCN8A-207ENST00000551216 ANXA1P04083 346 aa17.87■□□□□ 0.45
SCN8A-207ENST00000551216 PDE1AP54750 535 aa17.87■□□□□ 0.45
SCN8A-207ENST00000551216 LRP10Q7Z4F1 713 aa17.87■□□□□ 0.45
SCN8A-207ENST00000551216 STRN4Q9NRL3 753 aa17.87■□□□□ 0.45
SCN8A-207ENST00000551216 USP35Q9P2H5 1018 aa17.87■□□□□ 0.45
SCN8A-207ENST00000551216 EXOC6BQ9Y2D4 811 aa17.87■□□□□ 0.45
SCN8A-207ENST00000551216 TUBGCP6Q96RT7 1819 aa17.87■□□□□ 0.45
SCN8A-207ENST00000551216 DISP2A7MBM2 1401 aa17.87■□□□□ 0.45
SCN8A-207ENST00000551216 GRM8O00222 908 aa17.87■□□□□ 0.45
SCN8A-207ENST00000551216 RIC3Q7Z5B4 369 aa17.87■□□□□ 0.45
SCN8A-207ENST00000551216 KIF1BPQ96EK5 621 aa17.87■□□□□ 0.45
SCN8A-207ENST00000551216 METTL22Q9BUU2 404 aaPredicted RBP17.87■□□□□ 0.45
SCN8A-207ENST00000551216 KCPQ6ZWJ8 1503 aa17.86■□□□□ 0.45
SCN8A-207ENST00000551216 COL16A1Q07092 1604 aaPredicted RBP17.86■□□□□ 0.45
SCN8A-207ENST00000551216 SRGAP3O43295 1099 aa17.86■□□□□ 0.45
SCN8A-207ENST00000551216 C16orf71Q8IYS4 520 aaPredicted RBP17.86■□□□□ 0.45
SCN8A-207ENST00000551216 MX1P20591 662 aa17.85■□□□□ 0.45
SCN8A-207ENST00000551216 ANKRD13DQ6ZTN6 518 aa17.85■□□□□ 0.45
SCN8A-207ENST00000551216 ERC1Q8IUD2 1116 aa17.85■□□□□ 0.45
SCN8A-207ENST00000551216 CDCA7Q9BWT1 371 aaPredicted RBP17.85■□□□□ 0.45
SCN8A-207ENST00000551216 BTG4Q9NY30 223 aa17.85■□□□□ 0.45
SCN8A-207ENST00000551216 WNK3Q9BYP7 1800 aa17.85■□□□□ 0.45
SCN8A-207ENST00000551216 SMARCA5O60264 1052 aaPredicted RBP17.84■□□□□ 0.45
SCN8A-207ENST00000551216 XAGE3Q8WTP9 111 aa17.84■□□□□ 0.45
SCN8A-207ENST00000551216 TEX13AQ9BXU3 409 aaPredicted RBP17.84■□□□□ 0.45
SCN8A-207ENST00000551216 USP16Q9Y5T5 823 aa17.84■□□□□ 0.45
SCN8A-207ENST00000551216 ARFGEF2Q9Y6D5 1785 aa17.84■□□□□ 0.45
SCN8A-207ENST00000551216 SURF6O75683 361 aaKnown RBP17.83■□□□□ 0.45
SCN8A-207ENST00000551216 SDSP20132 328 aa17.83■□□□□ 0.45
SCN8A-207ENST00000551216 COPS6Q7L5N1 327 aa17.83■□□□□ 0.45
SCN8A-207ENST00000551216 VSIG10Q8N0Z9 540 aa17.83■□□□□ 0.45
SCN8A-207ENST00000551216 SNX21Q969T3 373 aa17.83■□□□□ 0.45
SCN8A-207ENST00000551216 PHLPP1O60346 1717 aa17.83■□□□□ 0.44
SCN8A-207ENST00000551216 TOGARAM1Q9Y4F4 1720 aa17.83■□□□□ 0.44
SCN8A-207ENST00000551216 PLBD2Q8NHP8 589 aa17.83■□□□□ 0.44
SCN8A-207ENST00000551216 OTUD7AQ8TE49 926 aaPredicted RBP17.83■□□□□ 0.44
SCN8A-207ENST00000551216 NEURL1BA8MQ27 555 aa17.82■□□□□ 0.44
SCN8A-207ENST00000551216 APBB1O00213 710 aa17.82■□□□□ 0.44
SCN8A-207ENST00000551216 REC8O95072 547 aa17.82■□□□□ 0.44
SCN8A-207ENST00000551216 RHPN1Q8TCX5 695 aa17.82■□□□□ 0.44
SCN8A-207ENST00000551216 EPB41L2O43491 1005 aaKnown RBP17.81■□□□□ 0.44
SCN8A-207ENST00000551216 IGKV5-2P06315 115 aa17.81■□□□□ 0.44
SCN8A-207ENST00000551216 MYL6BP14649 208 aa17.81■□□□□ 0.44
SCN8A-207ENST00000551216 AIMP1Q12904 312 aaKnown RBP17.81■□□□□ 0.44
SCN8A-207ENST00000551216 GCKRQ14397 625 aa17.81■□□□□ 0.44
SCN8A-207ENST00000551216 DDX54Q8TDD1 881 aaKnown RBP17.81■□□□□ 0.44
SCN8A-207ENST00000551216 TMOD3Q9NYL9 352 aa17.81■□□□□ 0.44
SCN8A-207ENST00000551216 THRAP3Q9Y2W1 955 aaKnown RBP17.81■□□□□ 0.44
SCN8A-207ENST00000551216 USP42Q9H9J4 1324 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms