RNA–Protein interactions for RNA: ENST00000550863.1

CPNE8-207, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-207ENST00000550863 USPL1Q5W0Q7 1092 aa15.45■□□□□ 0.06
CPNE8-207ENST00000550863 IL17REQ8NFR9 667 aa15.45■□□□□ 0.06
CPNE8-207ENST00000550863 RSPH6AQ9H0K4 717 aa15.45■□□□□ 0.06
CPNE8-207ENST00000550863 DPEP1P16444 411 aa15.44■□□□□ 0.06
CPNE8-207ENST00000550863 NLGN1Q8N2Q7 840 aa15.44■□□□□ 0.06
CPNE8-207ENST00000550863 CARMIL3Q8ND23 1372 aa15.44■□□□□ 0.06
CPNE8-207ENST00000550863 TIAM2Q8IVF5 1701 aa15.43■□□□□ 0.06
CPNE8-207ENST00000550863 KCNQ3O43525 872 aa15.43■□□□□ 0.06
CPNE8-207ENST00000550863 GIGYF1O75420 1035 aaPredicted RBP15.43■□□□□ 0.06
CPNE8-207ENST00000550863 BCS1LQ9Y276 419 aa15.43■□□□□ 0.06
CPNE8-207ENST00000550863 PARP3Q9Y6F1 533 aa15.43■□□□□ 0.06
CPNE8-207ENST00000550863 CEMIPQ8WUJ3 1361 aa15.42■□□□□ 0.06
CPNE8-207ENST00000550863 POLRMTO00411 1230 aaKnown RBP15.42■□□□□ 0.06
CPNE8-207ENST00000550863 C1QTNF8P60827 252 aa15.42■□□□□ 0.06
CPNE8-207ENST00000550863 ZNF496Q96IT1 587 aaPredicted RBP15.42■□□□□ 0.06
CPNE8-207ENST00000550863 BCL2L12Q9HB09 334 aa15.42■□□□□ 0.06
CPNE8-207ENST00000550863 SENP3-EIF4A1A0A087X0R7 540 aa15.41■□□□□ 0.06
CPNE8-207ENST00000550863 GNAT3A8MTJ3 354 aa15.41■□□□□ 0.06
CPNE8-207ENST00000550863 CANXP27824 592 aaKnown RBP15.41■□□□□ 0.06
CPNE8-207ENST00000550863 CHRNA5P30532 468 aa15.41■□□□□ 0.06
CPNE8-207ENST00000550863 HEG1Q9ULI3 1381 aa15.4■□□□□ 0.06
CPNE8-207ENST00000550863 PRAMEF22A3QJZ6 481 aa15.4■□□□□ 0.06
CPNE8-207ENST00000550863 KCNA3P22001 575 aa15.4■□□□□ 0.06
CPNE8-207ENST00000550863 PIP4K2AP48426 406 aaPredicted RBP15.4■□□□□ 0.06
CPNE8-207ENST00000550863 DCTN1Q14203 1278 aa15.4■□□□□ 0.06
CPNE8-207ENST00000550863 MCM10Q7L590 875 aa15.4■□□□□ 0.06
CPNE8-207ENST00000550863 GAS2L2Q8NHY3 880 aa15.4■□□□□ 0.06
CPNE8-207ENST00000550863 CEP350Q5VT06 3117 aa15.39■□□□□ 0.05
CPNE8-207ENST00000550863 U2AF1L5P0DN76 240 aaPredicted RBP15.39■□□□□ 0.05
CPNE8-207ENST00000550863 U2AF1Q01081 240 aaKnown RBP eCLIP15.39■□□□□ 0.05
CPNE8-207ENST00000550863 TEFQ10587 303 aa15.39■□□□□ 0.05
CPNE8-207ENST00000550863 NFIXQ14938 502 aa15.39■□□□□ 0.05
CPNE8-207ENST00000550863 TTC5Q8N0Z6 440 aa15.39■□□□□ 0.05
CPNE8-207ENST00000550863 ZNF330Q9Y3S2 320 aaPredicted RBP15.39■□□□□ 0.05
CPNE8-207ENST00000550863 FCHSD2O94868 740 aa15.38■□□□□ 0.05
CPNE8-207ENST00000550863 TGFB2P61812 414 aa15.38■□□□□ 0.05
CPNE8-207ENST00000550863 ZNF790Q6PG37 636 aa15.38■□□□□ 0.05
CPNE8-207ENST00000550863 CFAP53Q96M91 514 aa15.38■□□□□ 0.05
CPNE8-207ENST00000550863 ARFGEF2Q9Y6D5 1785 aa15.37■□□□□ 0.05
CPNE8-207ENST00000550863 ZPR1O75312 459 aa15.37■□□□□ 0.05
CPNE8-207ENST00000550863 TM4SF1P30408 202 aa15.37■□□□□ 0.05
CPNE8-207ENST00000550863 BICDL1Q6ZP65 573 aa15.37■□□□□ 0.05
CPNE8-207ENST00000550863 NARFQ9UHQ1 456 aa15.37■□□□□ 0.05
CPNE8-207ENST00000550863 VSIG10Q8N0Z9 540 aa15.36■□□□□ 0.05
CPNE8-207ENST00000550863 CCDC24Q8N4L8 307 aa15.36■□□□□ 0.05
CPNE8-207ENST00000550863 TNRC6CQ9HCJ0 1690 aaKnown RBP15.35■□□□□ 0.05
CPNE8-207ENST00000550863 A1BGP04217 495 aa15.35■□□□□ 0.05
CPNE8-207ENST00000550863 GPBP1L1Q9HC44 474 aaPredicted RBP15.35■□□□□ 0.05
CPNE8-207ENST00000550863 NUP98P52948 1817 aa15.34■□□□□ 0.05
CPNE8-207ENST00000550863 FER1L6Q2WGJ9 1857 aa15.34■□□□□ 0.05
CPNE8-207ENST00000550863 BTBD11A6QL63 1104 aa15.34■□□□□ 0.05
CPNE8-207ENST00000550863 EIF5P55010 431 aaKnown RBP15.34■□□□□ 0.05
CPNE8-207ENST00000550863 ARHGAP27Q6ZUM4 889 aa15.34■□□□□ 0.05
CPNE8-207ENST00000550863 TBC1D2BQ9UPU7 963 aa15.34■□□□□ 0.05
CPNE8-207ENST00000550863 SLX4Q8IY92 1834 aa15.33■□□□□ 0.05
CPNE8-207ENST00000550863 RASSF7Q02833 373 aa15.33■□□□□ 0.04
CPNE8-207ENST00000550863 TBC1D9BQ66K14 1250 aa15.33■□□□□ 0.04
CPNE8-207ENST00000550863 NUDCQ9Y266 331 aa15.33■□□□□ 0.04
CPNE8-207ENST00000550863 USP16Q9Y5T5 823 aa15.33■□□□□ 0.04
CPNE8-207ENST00000550863 SERPINB2P05120 415 aa15.32■□□□□ 0.04
CPNE8-207ENST00000550863 FMNL2Q96PY5 1086 aa15.32■□□□□ 0.04
CPNE8-207ENST00000550863 MIS18AQ9NYP9 233 aa15.32■□□□□ 0.04
CPNE8-207ENST00000550863 DICER1Q9UPY3 1922 aaKnown RBP15.32■□□□□ 0.04
CPNE8-207ENST00000550863 THUMPD2Q9BTF0 503 aaKnown RBP15.31■□□□□ 0.04
CPNE8-207ENST00000550863 PIM2Q9P1W9 311 aa15.31■□□□□ 0.04
CPNE8-207ENST00000550863 KIF3CO14782 793 aa15.3■□□□□ 0.04
CPNE8-207ENST00000550863 STARD3NLO95772 234 aa15.3■□□□□ 0.04
CPNE8-207ENST00000550863 PRELPP51888 382 aa15.3■□□□□ 0.04
CPNE8-207ENST00000550863 DALRD3Q5D0E6 543 aaKnown RBP15.3■□□□□ 0.04
CPNE8-207ENST00000550863 CAMTA2O94983 1202 aa15.29■□□□□ 0.04
CPNE8-207ENST00000550863 C9orf131Q5VYM1 1079 aa15.29■□□□□ 0.04
CPNE8-207ENST00000550863 NMRK2Q9NPI5 230 aa15.29■□□□□ 0.04
CPNE8-207ENST00000550863 WDR90Q96KV7 1748 aa15.29■□□□□ 0.04
CPNE8-207ENST00000550863 NBPF26B4DH59 902 aa15.28■□□□□ 0.04
CPNE8-207ENST00000550863 PRR5LQ6MZQ0 368 aa15.28■□□□□ 0.04
CPNE8-207ENST00000550863 NBPF10Q6P3W6 841 aaKnown RBP15.28■□□□□ 0.04
CPNE8-207ENST00000550863 NBPF15Q8N660 670 aa15.28■□□□□ 0.04
CPNE8-207ENST00000550863 RTF1Q92541 710 aaKnown RBP15.28■□□□□ 0.04
CPNE8-207ENST00000550863 PLEKHF1Q96S99 279 aa15.28■□□□□ 0.04
CPNE8-207ENST00000550863 IL6STP40189 918 aaPredicted RBP15.27■□□□□ 0.04
CPNE8-207ENST00000550863 DZIP3Q86Y13 1208 aaKnown RBP15.27■□□□□ 0.04
CPNE8-207ENST00000550863 C2CD5Q86YS7 1000 aa15.27■□□□□ 0.04
CPNE8-207ENST00000550863 RNF181Q9P0P0 153 aa15.27■□□□□ 0.04
CPNE8-207ENST00000550863 ZNF219Q9P2Y4 722 aaPredicted RBP15.27■□□□□ 0.04
CPNE8-207ENST00000550863 ANKRD36CQ5JPF3 1778 aa15.26■□□□□ 0.03
CPNE8-207ENST00000550863 A0A087WZG4 1122 aa15.25■□□□□ 0.03
CPNE8-207ENST00000550863 LAMB2P55268 1798 aa15.24■□□□□ 0.03
CPNE8-207ENST00000550863 TEX13AQ9BXU3 409 aaPredicted RBP15.24■□□□□ 0.03
CPNE8-207ENST00000550863 NFKBIEO00221 500 aa15.23■□□□□ 0.03
CPNE8-207ENST00000550863 DDX10Q13206 875 aaKnown RBP15.23■□□□□ 0.03
CPNE8-207ENST00000550863 NFE2L2Q16236 605 aa15.23■□□□□ 0.03
CPNE8-207ENST00000550863 FAM177BA6PVY3 158 aa15.22■□□□□ 0.03
CPNE8-207ENST00000550863 SNRPA1P09661 255 aaKnown RBP15.22■□□□□ 0.03
CPNE8-207ENST00000550863 HLFQ16534 295 aa15.22■□□□□ 0.03
CPNE8-207ENST00000550863 ZNF622Q969S3 477 aaKnown RBP eCLIP15.22■□□□□ 0.03
CPNE8-207ENST00000550863 TAF7Q15545 349 aaPredicted RBP15.21■□□□□ 0.03
CPNE8-207ENST00000550863 NGEFQ8N5V2 710 aa15.21■□□□□ 0.03
CPNE8-207ENST00000550863 TTLL6Q8N841 843 aa15.21■□□□□ 0.03
CPNE8-207ENST00000550863 CNBD1Q8NA66 436 aa15.21■□□□□ 0.03
CPNE8-207ENST00000550863 ABCC12Q96J65 1359 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 306.5 ms