RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 GAS2L2Q8NHY3 880 aa27.84■■■□□ 2.05
CACNB3-218ENST00000550771 U2SURPO15042 1029 aaKnown RBP27.83■■■□□ 2.05
CACNB3-218ENST00000550771 NFIXQ14938 502 aa27.83■■■□□ 2.05
CACNB3-218ENST00000550771 TTC5Q8N0Z6 440 aa27.83■■■□□ 2.05
CACNB3-218ENST00000550771 STARD3NLO95772 234 aa27.82■■■□□ 2.04
CACNB3-218ENST00000550771 CHRNA5P30532 468 aa27.82■■■□□ 2.04
CACNB3-218ENST00000550771 ARFGEF1Q9Y6D6 1849 aa27.81■■■□□ 2.04
CACNB3-218ENST00000550771 GNAT3A8MTJ3 354 aa27.81■■■□□ 2.04
CACNB3-218ENST00000550771 C9orf131Q5VYM1 1079 aa27.81■■■□□ 2.04
CACNB3-218ENST00000550771 IL17REQ8NFR9 667 aa27.8■■■□□ 2.04
CACNB3-218ENST00000550771 BCL2L12Q9HB09 334 aa27.8■■■□□ 2.04
CACNB3-218ENST00000550771 VIRMAQ69YN4 1812 aaKnown RBP27.79■■■□□ 2.04
CACNB3-218ENST00000550771 TOMM70O94826 608 aa27.79■■■□□ 2.04
CACNB3-218ENST00000550771 TEFQ10587 303 aa27.79■■■□□ 2.04
CACNB3-218ENST00000550771 CEP350Q5VT06 3117 aa27.79■■■□□ 2.04
CACNB3-218ENST00000550771 UBR2Q8IWV8 1755 aa27.78■■■□□ 2.04
CACNB3-218ENST00000550771 CANXP27824 592 aaKnown RBP27.78■■■□□ 2.04
CACNB3-218ENST00000550771 CNGB1Q14028 1251 aaPredicted RBP27.78■■■□□ 2.04
CACNB3-218ENST00000550771 ZNF790Q6PG37 636 aa27.78■■■□□ 2.04
CACNB3-218ENST00000550771 TEX13AQ9BXU3 409 aaPredicted RBP27.78■■■□□ 2.04
CACNB3-218ENST00000550771 EIF5P55010 431 aaKnown RBP27.77■■■□□ 2.04
CACNB3-218ENST00000550771 ZNF496Q96IT1 587 aaPredicted RBP27.77■■■□□ 2.04
CACNB3-218ENST00000550771 A0A087WZG4 1122 aa27.76■■■□□ 2.03
CACNB3-218ENST00000550771 SERPINB2P05120 415 aa27.76■■■□□ 2.03
CACNB3-218ENST00000550771 NMRK2Q9NPI5 230 aa27.76■■■□□ 2.03
CACNB3-218ENST00000550771 HEG1Q9ULI3 1381 aa27.75■■■□□ 2.03
CACNB3-218ENST00000550771 CFAP53Q96M91 514 aa27.74■■■□□ 2.03
CACNB3-218ENST00000550771 CEMIPQ8WUJ3 1361 aa27.73■■■□□ 2.03
CACNB3-218ENST00000550771 NRXN2Q9P2S2 1712 aa27.73■■■□□ 2.03
CACNB3-218ENST00000550771 RNF181Q9P0P0 153 aa27.73■■■□□ 2.03
CACNB3-218ENST00000550771 APLP1P51693 650 aa27.71■■■□□ 2.03
CACNB3-218ENST00000550771 FMNL2Q96PY5 1086 aa27.71■■■□□ 2.03
CACNB3-218ENST00000550771 RSPH6AQ9H0K4 717 aa27.71■■■□□ 2.03
CACNB3-218ENST00000550771 KDM2BQ8NHM5 1336 aa27.7■■■□□ 2.03
CACNB3-218ENST00000550771 PRKAR2BP31323 418 aa27.7■■■□□ 2.02
CACNB3-218ENST00000550771 PHACTR3Q96KR7 559 aa27.7■■■□□ 2.02
CACNB3-218ENST00000550771 NUDCQ9Y266 331 aa27.7■■■□□ 2.02
CACNB3-218ENST00000550771 AFDNP55196 1824 aaKnown RBP27.69■■■□□ 2.02
CACNB3-218ENST00000550771 IL6STP40189 918 aaPredicted RBP27.69■■■□□ 2.02
CACNB3-218ENST00000550771 RBM46Q8TBY0 533 aaKnown RBP27.69■■■□□ 2.02
CACNB3-218ENST00000550771 TTLL6Q8N841 843 aa27.68■■■□□ 2.02
CACNB3-218ENST00000550771 ZC3H4Q9UPT8 1303 aaKnown RBP27.67■■■□□ 2.02
CACNB3-218ENST00000550771 H0YIN7 160 aa27.67■■■□□ 2.02
CACNB3-218ENST00000550771 BICDL1Q6ZP65 573 aa27.67■■■□□ 2.02
CACNB3-218ENST00000550771 C2CD5Q86YS7 1000 aa27.67■■■□□ 2.02
CACNB3-218ENST00000550771 SIPA1L3O60292 1781 aaPredicted RBP27.67■■■□□ 2.02
CACNB3-218ENST00000550771 BTBD11A6QL63 1104 aa27.66■■■□□ 2.02
CACNB3-218ENST00000550771 TBC1D9BQ66K14 1250 aa27.66■■■□□ 2.02
CACNB3-218ENST00000550771 C16orf71Q8IYS4 520 aaPredicted RBP27.66■■■□□ 2.02
CACNB3-218ENST00000550771 CARMIL3Q8ND23 1372 aa27.65■■■□□ 2.02
CACNB3-218ENST00000550771 PDZRN3Q9UPQ7 1066 aa27.65■■■□□ 2.02
CACNB3-218ENST00000550771 TBC1D2BQ9UPU7 963 aa27.65■■■□□ 2.02
CACNB3-218ENST00000550771 NPM2Q86SE8 214 aaKnown RBP27.64■■■□□ 2.02
CACNB3-218ENST00000550771 ZNF330Q9Y3S2 320 aaPredicted RBP27.64■■■□□ 2.02
CACNB3-218ENST00000550771 KCNQ3O43525 872 aa27.63■■■□□ 2.01
CACNB3-218ENST00000550771 A1BGP04217 495 aa27.63■■■□□ 2.01
CACNB3-218ENST00000550771 LMNB1P20700 586 aa27.63■■■□□ 2.01
CACNB3-218ENST00000550771 PPP2R1AP30153 589 aa27.63■■■□□ 2.01
CACNB3-218ENST00000550771 RASSF7Q02833 373 aa27.63■■■□□ 2.01
CACNB3-218ENST00000550771 BRIP1Q9BX63 1249 aa27.63■■■□□ 2.01
CACNB3-218ENST00000550771 U2AF1L5P0DN76 240 aaPredicted RBP27.62■■■□□ 2.01
CACNB3-218ENST00000550771 U2AF1Q01081 240 aaKnown RBP eCLIP27.62■■■□□ 2.01
CACNB3-218ENST00000550771 FSTL1Q12841 308 aa27.62■■■□□ 2.01
CACNB3-218ENST00000550771 DLEC1Q9Y238 1755 aa27.62■■■□□ 2.01
CACNB3-218ENST00000550771 SBF1O95248 1867 aa27.61■■■□□ 2.01
CACNB3-218ENST00000550771 PDE6BP35913 854 aa27.61■■■□□ 2.01
CACNB3-218ENST00000550771 RRAGCQ9HB90 399 aa27.61■■■□□ 2.01
CACNB3-218ENST00000550771 SCN7AQ01118 1682 aa27.6■■■□□ 2.01
CACNB3-218ENST00000550771 CAMTA2O94983 1202 aa27.6■■■□□ 2.01
CACNB3-218ENST00000550771 PRR5LQ6MZQ0 368 aa27.6■■■□□ 2.01
CACNB3-218ENST00000550771 RTF1Q92541 710 aaKnown RBP27.6■■■□□ 2.01
CACNB3-218ENST00000550771 IFFO2Q5TF58 517 aa27.59■■■□□ 2.01
CACNB3-218ENST00000550771 DNAJC5GQ8N7S2 189 aa27.59■■■□□ 2.01
CACNB3-218ENST00000550771 SETDB2Q96T68 719 aa27.59■■■□□ 2.01
CACNB3-218ENST00000550771 PRELPP51888 382 aa27.58■■■□□ 2.01
CACNB3-218ENST00000550771 HTATSF1O43719 755 aaKnown RBP27.57■■■□□ 2
CACNB3-218ENST00000550771 USP16Q9Y5T5 823 aa27.57■■■□□ 2
CACNB3-218ENST00000550771 NFKBIEO00221 500 aa27.56■■■□□ 2
CACNB3-218ENST00000550771 SNRPA1P09661 255 aaKnown RBP27.56■■■□□ 2
CACNB3-218ENST00000550771 MCM10Q7L590 875 aa27.56■■■□□ 2
CACNB3-218ENST00000550771 DZIP3Q86Y13 1208 aaKnown RBP27.56■■■□□ 2
CACNB3-218ENST00000550771 ZNF622Q969S3 477 aaKnown RBP eCLIP27.56■■■□□ 2
CACNB3-218ENST00000550771 GLTPD2A6NH11 291 aa27.55■■■□□ 2
CACNB3-218ENST00000550771 CNBD1Q8NA66 436 aa27.55■■■□□ 2
CACNB3-218ENST00000550771 TNRC6CQ9HCJ0 1690 aaKnown RBP27.55■■■□□ 2
CACNB3-218ENST00000550771 CLEC4GQ6UXB4 293 aa27.53■■■□□ 2
CACNB3-218ENST00000550771 CCDC24Q8N4L8 307 aa27.53■■■□□ 2
CACNB3-218ENST00000550771 PRAMEF22A3QJZ6 481 aa27.52■■■□□ 2
CACNB3-218ENST00000550771 ST5P78524 1137 aa27.52■■■□□ 2
CACNB3-218ENST00000550771 SMC1BQ8NDV3 1235 aa27.52■■■□□ 2
CACNB3-218ENST00000550771 ANKRD31Q8N7Z5 1873 aa27.52■■■□□ 2
CACNB3-218ENST00000550771 NPHP1O15259 732 aa27.51■■□□□ 1.99
CACNB3-218ENST00000550771 VEGFAP15692 232 aaPredicted RBP27.51■■□□□ 1.99
CACNB3-218ENST00000550771 CNKSR1Q969H4 720 aa27.51■■□□□ 1.99
CACNB3-218ENST00000550771 RGL2O15211 777 aa27.5■■□□□ 1.99
CACNB3-218ENST00000550771 C21orf2O43822 256 aa27.5■■□□□ 1.99
CACNB3-218ENST00000550771 DCTN1Q14203 1278 aa27.5■■□□□ 1.99
CACNB3-218ENST00000550771 STYK1Q6J9G0 422 aa27.5■■□□□ 1.99
CACNB3-218ENST00000550771 ZNF652Q9Y2D9 606 aa27.5■■□□□ 1.99
CACNB3-218ENST00000550771 PIP4K2AP48426 406 aaPredicted RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms