RNA–Protein interactions for RNA: ENST00000550770.1

PRIM1-206, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-206ENST00000550770 KAT6BQ8WYB5 2073 aa15.1■□□□□ 0.01
PRIM1-206ENST00000550770 CNGB1Q14028 1251 aaPredicted RBP15.1■□□□□ 0.01
PRIM1-206ENST00000550770 DOK7Q18PE1 504 aa15.1■□□□□ 0.01
PRIM1-206ENST00000550770 SLC27A3Q5K4L6 730 aa15.1■□□□□ 0.01
PRIM1-206ENST00000550770 PDGFDQ9GZP0 370 aaPredicted RBP15.1■□□□□ 0.01
PRIM1-206ENST00000550770 ITGB4P16144 1822 aa15.09■□□□□ 0.01
PRIM1-206ENST00000550770 ST18O60284 1047 aa15.09■□□□□ 0.01
PRIM1-206ENST00000550770 ZNF827Q17R98 1081 aa15.09■□□□□ 0.01
PRIM1-206ENST00000550770 SULT6B1Q6IMI4 303 aa15.09■□□□□ 0.01
PRIM1-206ENST00000550770 MPRIPQ6WCQ1 1025 aa15.09■□□□□ 0.01
PRIM1-206ENST00000550770 IFNL2Q8IZJ0 200 aa15.09■□□□□ 0.01
PRIM1-206ENST00000550770 KCNQ4P56696 695 aa15.08■□□□□ 0
PRIM1-206ENST00000550770 PALLDQ8WX93 1383 aa15.08■□□□□ 0
PRIM1-206ENST00000550770 PIGBQ92521 554 aa15.07■□□□□ 0
PRIM1-206ENST00000550770 CCNL1Q9UK58 526 aaPredicted RBP15.07■□□□□ 0
PRIM1-206ENST00000550770 C2orf72A6NCS6 295 aa15.06■□□□□ 0
PRIM1-206ENST00000550770 PLEKHO1Q53GL0 409 aaPredicted RBP15.06■□□□□ 0
PRIM1-206ENST00000550770 LCE2DQ5TA82 110 aaPredicted RBP15.06■□□□□ 0
PRIM1-206ENST00000550770 KDM6AO15550 1401 aaPredicted RBP15.06■□□□□ 0
PRIM1-206ENST00000550770 RIMBP2O15034 1052 aa15.05■□□□□ -0
PRIM1-206ENST00000550770 DIAPH1O60610 1272 aaKnown RBP15.05■□□□□ -0
PRIM1-206ENST00000550770 AMOTQ4VCS5 1084 aa15.05■□□□□ -0
PRIM1-206ENST00000550770 ZNF530Q6P9A1 599 aaPredicted RBP15.05■□□□□ -0
PRIM1-206ENST00000550770 ZNF710Q8N1W2 664 aa15.05■□□□□ -0
PRIM1-206ENST00000550770 SPON1Q9HCB6 807 aa15.05■□□□□ -0
PRIM1-206ENST00000550770 QSER1Q2KHR3 1735 aa15.05■□□□□ -0
PRIM1-206ENST00000550770 TUBGCP6Q96RT7 1819 aa15.04■□□□□ -0
PRIM1-206ENST00000550770 C5P01031 1676 aa15.04■□□□□ -0
PRIM1-206ENST00000550770 POTEMA6NI47 508 aa15.04■□□□□ -0
PRIM1-206ENST00000550770 ZBTB7AO95365 584 aa15.04■□□□□ -0
PRIM1-206ENST00000550770 TMOD3Q9NYL9 352 aa15.04■□□□□ -0
PRIM1-206ENST00000550770 KIF3CO14782 793 aa15.03■□□□□ -0
PRIM1-206ENST00000550770 HMOX1P09601 288 aa15.03■□□□□ -0
PRIM1-206ENST00000550770 POTEGQ6S5H5 508 aa15.03■□□□□ -0
PRIM1-206ENST00000550770 DCAF5Q96JK2 942 aa15.03■□□□□ -0
PRIM1-206ENST00000550770 PNPLA7Q6ZV29 1317 aa15.02■□□□□ -0
PRIM1-206ENST00000550770 HSP90AB1P08238 724 aaKnown RBP15.02■□□□□ -0
PRIM1-206ENST00000550770 HOXB3P14651 431 aaPredicted RBP15.02■□□□□ -0
PRIM1-206ENST00000550770 PPP2R1AP30153 589 aa15.02■□□□□ -0
PRIM1-206ENST00000550770 SMARCC1Q92922 1105 aaPredicted RBP15.02■□□□□ -0
PRIM1-206ENST00000550770 ERVV-2B6SEH9 535 aa15.01□□□□□ -0.01
PRIM1-206ENST00000550770 PTGER2P43116 358 aa15.01□□□□□ -0.01
PRIM1-206ENST00000550770 ASAP1Q9ULH1 1129 aa15.01□□□□□ -0.01
PRIM1-206ENST00000550770 TAF1LQ8IZX4 1826 aa15.01□□□□□ -0.01
PRIM1-206ENST00000550770 C1orf141Q5JVX7 400 aa15□□□□□ -0.01
PRIM1-206ENST00000550770 SPRYD3Q8NCJ5 442 aa15□□□□□ -0.01
PRIM1-206ENST00000550770 MTFR1LQ9H019 292 aa15□□□□□ -0.01
PRIM1-206ENST00000550770 TFCP2L1Q9NZI6 479 aa15□□□□□ -0.01
PRIM1-206ENST00000550770 C4BP0C0L5 1744 aa15□□□□□ -0.01
PRIM1-206ENST00000550770 U2SURPO15042 1029 aaKnown RBP14.99□□□□□ -0.01
PRIM1-206ENST00000550770 ATG3Q9NT62 314 aa14.99□□□□□ -0.01
PRIM1-206ENST00000550770 LOC102724428A0A0B4J2F2 783 aa14.98□□□□□ -0.01
PRIM1-206ENST00000550770 SIK1P57059 783 aa14.98□□□□□ -0.01
PRIM1-206ENST00000550770 AKAP4Q5JQC9 854 aa14.98□□□□□ -0.01
PRIM1-206ENST00000550770 PPP1R1BQ9UD71 204 aaPredicted RBP14.98□□□□□ -0.01
PRIM1-206ENST00000550770 SCN11AQ9UI33 1791 aa14.98□□□□□ -0.01
PRIM1-206ENST00000550770 ADAMTS7Q9UKP4 1686 aa14.97□□□□□ -0.01
PRIM1-206ENST00000550770 MRC1P22897 1456 aa14.97□□□□□ -0.01
PRIM1-206ENST00000550770 MTHFSDQ2M296 383 aaKnown RBP14.97□□□□□ -0.01
PRIM1-206ENST00000550770 CFAP53Q96M91 514 aa14.97□□□□□ -0.01
PRIM1-206ENST00000550770 COL24A1Q17RW2 1714 aa14.97□□□□□ -0.01
PRIM1-206ENST00000550770 CABP4P57796 275 aa14.96□□□□□ -0.01
PRIM1-206ENST00000550770 ITPK1Q13572 414 aa14.96□□□□□ -0.01
PRIM1-206ENST00000550770 LINC00116Q8NCU8 138 aa14.96□□□□□ -0.01
PRIM1-206ENST00000550770 ZSWIM6Q9HCJ5 1215 aa14.96□□□□□ -0.01
PRIM1-206ENST00000550770 GPHNQ9NQX3 736 aaPredicted RBP14.96□□□□□ -0.01
PRIM1-206ENST00000550770 ZNF831Q5JPB2 1677 aa14.96□□□□□ -0.01
PRIM1-206ENST00000550770 NFATC2IPQ8NCF5 419 aa14.95□□□□□ -0.02
PRIM1-206ENST00000550770 SLC16A10Q8TF71 515 aa14.95□□□□□ -0.02
PRIM1-206ENST00000550770 SLC4A9Q96Q91 983 aa14.95□□□□□ -0.02
PRIM1-206ENST00000550770 HMGB2P26583 209 aaKnown RBP14.94□□□□□ -0.02
PRIM1-206ENST00000550770 ATP6V1AP38606 617 aa14.94□□□□□ -0.02
PRIM1-206ENST00000550770 AMIGO3Q86WK7 504 aa14.94□□□□□ -0.02
PRIM1-206ENST00000550770 COL23A1Q86Y22 540 aaPredicted RBP14.94□□□□□ -0.02
PRIM1-206ENST00000550770 RSPH6AQ9H0K4 717 aa14.94□□□□□ -0.02
PRIM1-206ENST00000550770 LGR6Q9HBX8 967 aa14.94□□□□□ -0.02
PRIM1-206ENST00000550770 UBR3Q6ZT12 1888 aa14.94□□□□□ -0.02
PRIM1-206ENST00000550770 AK7Q96M32 723 aa14.93□□□□□ -0.02
PRIM1-206ENST00000550770 CICQ96RK0 1608 aaPredicted RBP14.92□□□□□ -0.02
PRIM1-206ENST00000550770 COL5A3P25940 1745 aaPredicted RBP14.92□□□□□ -0.02
PRIM1-206ENST00000550770 VIRMAQ69YN4 1812 aaKnown RBP14.92□□□□□ -0.02
PRIM1-206ENST00000550770 RNMTO43148 476 aaKnown RBP14.92□□□□□ -0.02
PRIM1-206ENST00000550770 PRKAR2BP31323 418 aa14.92□□□□□ -0.02
PRIM1-206ENST00000550770 DDX10Q13206 875 aaKnown RBP14.92□□□□□ -0.02
PRIM1-206ENST00000550770 SLC52A2Q9HAB3 445 aa14.92□□□□□ -0.02
PRIM1-206ENST00000550770 NUDCQ9Y266 331 aa14.92□□□□□ -0.02
PRIM1-206ENST00000550770 MAP3K5Q99683 1374 aa14.91□□□□□ -0.02
PRIM1-206ENST00000550770 PDE4AP27815 886 aa14.91□□□□□ -0.02
PRIM1-206ENST00000550770 EMP3P54852 163 aa14.91□□□□□ -0.02
PRIM1-206ENST00000550770 FOXK1P85037 733 aa14.91□□□□□ -0.02
PRIM1-206ENST00000550770 PAXIP1Q6ZW49 1069 aaPredicted RBP14.91□□□□□ -0.02
PRIM1-206ENST00000550770 FLAD1Q8NFF5 587 aa14.91□□□□□ -0.02
PRIM1-206ENST00000550770 GAS2L2Q8NHY3 880 aa14.91□□□□□ -0.02
PRIM1-206ENST00000550770 PHACTR3Q96KR7 559 aa14.91□□□□□ -0.02
PRIM1-206ENST00000550770 TJP1Q07157 1748 aa14.91□□□□□ -0.02
PRIM1-206ENST00000550770 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.9□□□□□ -0.02
PRIM1-206ENST00000550770 U2AF1L5P0DN76 240 aaPredicted RBP14.9□□□□□ -0.02
PRIM1-206ENST00000550770 HOXB1P14653 301 aaPredicted RBP14.9□□□□□ -0.02
PRIM1-206ENST00000550770 U2AF1Q01081 240 aaKnown RBP eCLIP14.9□□□□□ -0.02
PRIM1-206ENST00000550770 SMIM5Q71RC9 77 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms