RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 MTHFSDQ2M296 383 aaKnown RBP19.14■□□□□ 0.65
TPCN1-213ENST00000550543 CC2D1BQ5T0F9 858 aaKnown RBP19.14■□□□□ 0.65
TPCN1-213ENST00000550543 C9orf131Q5VYM1 1079 aa19.14■□□□□ 0.65
TPCN1-213ENST00000550543 USPL1Q5W0Q7 1092 aa19.14■□□□□ 0.65
TPCN1-213ENST00000550543 COL15A1P39059 1388 aa19.14■□□□□ 0.65
TPCN1-213ENST00000550543 KIAA1551Q9HCM1 1747 aa19.14■□□□□ 0.65
TPCN1-213ENST00000550543 CFAP53Q96M91 514 aa19.13■□□□□ 0.65
TPCN1-213ENST00000550543 TJP1Q07157 1748 aa19.13■□□□□ 0.65
TPCN1-213ENST00000550543 N4BP2Q86UW6 1770 aaPredicted RBP19.12■□□□□ 0.65
TPCN1-213ENST00000550543 RBM46Q8TBY0 533 aaKnown RBP19.12■□□□□ 0.65
TPCN1-213ENST00000550543 GNAT3A8MTJ3 354 aa19.11■□□□□ 0.65
TPCN1-213ENST00000550543 SLC39A6Q13433 755 aa19.11■□□□□ 0.65
TPCN1-213ENST00000550543 U2SURPO15042 1029 aaKnown RBP19.1■□□□□ 0.65
TPCN1-213ENST00000550543 FSTL1Q12841 308 aa19.1■□□□□ 0.65
TPCN1-213ENST00000550543 NFIXQ14938 502 aa19.1■□□□□ 0.65
TPCN1-213ENST00000550543 RNF181Q9P0P0 153 aa19.1■□□□□ 0.65
TPCN1-213ENST00000550543 NUDCQ9Y266 331 aa19.1■□□□□ 0.65
TPCN1-213ENST00000550543 ZBTB1Q9Y2K1 713 aa19.1■□□□□ 0.65
TPCN1-213ENST00000550543 ARFGEF1Q9Y6D6 1849 aa19.09■□□□□ 0.65
TPCN1-213ENST00000550543 KCPQ6ZWJ8 1503 aa19.09■□□□□ 0.65
TPCN1-213ENST00000550543 ADAMTS7Q9UKP4 1686 aa19.08■□□□□ 0.65
TPCN1-213ENST00000550543 BRCA1P38398 1863 aaKnown RBP19.08■□□□□ 0.65
TPCN1-213ENST00000550543 H0YIN7 160 aa19.08■□□□□ 0.64
TPCN1-213ENST00000550543 SERPINB2P05120 415 aa19.08■□□□□ 0.64
TPCN1-213ENST00000550543 CHRNA5P30532 468 aa19.08■□□□□ 0.64
TPCN1-213ENST00000550543 IFFO2Q5TF58 517 aa19.08■□□□□ 0.64
TPCN1-213ENST00000550543 TTLL6Q8N841 843 aa19.08■□□□□ 0.64
TPCN1-213ENST00000550543 CANXP27824 592 aaKnown RBP19.07■□□□□ 0.64
TPCN1-213ENST00000550543 ZNF790Q6PG37 636 aa19.07■□□□□ 0.64
TPCN1-213ENST00000550543 FMNL2Q96PY5 1086 aa19.07■□□□□ 0.64
TPCN1-213ENST00000550543 LMNB1P20700 586 aa19.06■□□□□ 0.64
TPCN1-213ENST00000550543 EIF5P55010 431 aaKnown RBP19.06■□□□□ 0.64
TPCN1-213ENST00000550543 NMRK2Q9NPI5 230 aa19.06■□□□□ 0.64
TPCN1-213ENST00000550543 HEG1Q9ULI3 1381 aa19.06■□□□□ 0.64
TPCN1-213ENST00000550543 PDE6BP35913 854 aa19.05■□□□□ 0.64
TPCN1-213ENST00000550543 IL6STP40189 918 aaPredicted RBP19.05■□□□□ 0.64
TPCN1-213ENST00000550543 C2CD5Q86YS7 1000 aa19.04■□□□□ 0.64
TPCN1-213ENST00000550543 CEP350Q5VT06 3117 aa19.03■□□□□ 0.64
TPCN1-213ENST00000550543 RTF1Q92541 710 aaKnown RBP19.03■□□□□ 0.64
TPCN1-213ENST00000550543 ZNF496Q96IT1 587 aaPredicted RBP19.03■□□□□ 0.64
TPCN1-213ENST00000550543 CARMIL3Q8ND23 1372 aa19.03■□□□□ 0.64
TPCN1-213ENST00000550543 COL3A1P02461 1466 aaPredicted RBP19.03■□□□□ 0.64
TPCN1-213ENST00000550543 NPHP1O15259 732 aa19.02■□□□□ 0.64
TPCN1-213ENST00000550543 SMC1BQ8NDV3 1235 aa19.02■□□□□ 0.64
TPCN1-213ENST00000550543 IL17REQ8NFR9 667 aa19.02■□□□□ 0.64
TPCN1-213ENST00000550543 BRIP1Q9BX63 1249 aa19.02■□□□□ 0.64
TPCN1-213ENST00000550543 BCL2L12Q9HB09 334 aa19.02■□□□□ 0.64
TPCN1-213ENST00000550543 SOGA3Q5TF21 947 aa19.01■□□□□ 0.63
TPCN1-213ENST00000550543 CEMIPQ8WUJ3 1361 aa19.01■□□□□ 0.63
TPCN1-213ENST00000550543 UBR2Q8IWV8 1755 aa19.01■□□□□ 0.63
TPCN1-213ENST00000550543 NRXN2Q9P2S2 1712 aa19■□□□□ 0.63
TPCN1-213ENST00000550543 BTBD11A6QL63 1104 aa19■□□□□ 0.63
TPCN1-213ENST00000550543 SETDB2Q96T68 719 aa19■□□□□ 0.63
TPCN1-213ENST00000550543 ZNF652Q9Y2D9 606 aa19■□□□□ 0.63
TPCN1-213ENST00000550543 RGL2O15211 777 aa18.99■□□□□ 0.63
TPCN1-213ENST00000550543 NEFMP07197 916 aa18.99■□□□□ 0.63
TPCN1-213ENST00000550543 VEGFAP15692 232 aaPredicted RBP18.99■□□□□ 0.63
TPCN1-213ENST00000550543 PRKAR2BP31323 418 aa18.99■□□□□ 0.63
TPCN1-213ENST00000550543 ST5P78524 1137 aa18.99■□□□□ 0.63
TPCN1-213ENST00000550543 DPY19L2Q6NUT2 758 aa18.99■□□□□ 0.63
TPCN1-213ENST00000550543 BICDL1Q6ZP65 573 aa18.99■□□□□ 0.63
TPCN1-213ENST00000550543 ZNF330Q9Y3S2 320 aaPredicted RBP18.99■□□□□ 0.63
TPCN1-213ENST00000550543 GLTPD2A6NH11 291 aa18.98■□□□□ 0.63
TPCN1-213ENST00000550543 HTATSF1O43719 755 aaKnown RBP18.98■□□□□ 0.63
TPCN1-213ENST00000550543 CNBD1Q8NA66 436 aa18.98■□□□□ 0.63
TPCN1-213ENST00000550543 CNKSR1Q969H4 720 aa18.98■□□□□ 0.63
TPCN1-213ENST00000550543 RRAGCQ9HB90 399 aa18.98■□□□□ 0.63
TPCN1-213ENST00000550543 TNRC6CQ9HCJ0 1690 aaKnown RBP18.98■□□□□ 0.63
TPCN1-213ENST00000550543 CLEC4GQ6UXB4 293 aa18.97■□□□□ 0.63
TPCN1-213ENST00000550543 ZNF622Q969S3 477 aaKnown RBP eCLIP18.97■□□□□ 0.632e-7■□□□□ 10.6
TPCN1-213ENST00000550543 RSPH6AQ9H0K4 717 aa18.97■□□□□ 0.63
TPCN1-213ENST00000550543 SNRPA1P09661 255 aaKnown RBP18.96■□□□□ 0.63
TPCN1-213ENST00000550543 U2AF1L5P0DN76 240 aaPredicted RBP18.96■□□□□ 0.63
TPCN1-213ENST00000550543 U2AF1Q01081 240 aaKnown RBP eCLIP18.96■□□□□ 0.63
TPCN1-213ENST00000550543 TBC1D9BQ66K14 1250 aa18.96■□□□□ 0.63
TPCN1-213ENST00000550543 RASSF7Q02833 373 aa18.95■□□□□ 0.62
TPCN1-213ENST00000550543 CNGB1Q14028 1251 aaPredicted RBP18.95■□□□□ 0.62
TPCN1-213ENST00000550543 STYK1Q6J9G0 422 aa18.95■□□□□ 0.62
TPCN1-213ENST00000550543 DNAJC5GQ8N7S2 189 aa18.95■□□□□ 0.62
TPCN1-213ENST00000550543 TBC1D2BQ9UPU7 963 aa18.95■□□□□ 0.62
TPCN1-213ENST00000550543 VIRMAQ69YN4 1812 aaKnown RBP18.95■□□□□ 0.62
TPCN1-213ENST00000550543 PRR5LQ6MZQ0 368 aa18.94■□□□□ 0.62
TPCN1-213ENST00000550543 DZIP3Q86Y13 1208 aaKnown RBP18.94■□□□□ 0.62
TPCN1-213ENST00000550543 KLRG1Q96E93 195 aa18.94■□□□□ 0.62
TPCN1-213ENST00000550543 AFDNP55196 1824 aaKnown RBP18.94■□□□□ 0.62
TPCN1-213ENST00000550543 LTBP3Q9NS15 1303 aa18.94■□□□□ 0.62
TPCN1-213ENST00000550543 DLEC1Q9Y238 1755 aa18.93■□□□□ 0.62
TPCN1-213ENST00000550543 CAMTA2O94983 1202 aa18.93■□□□□ 0.62
TPCN1-213ENST00000550543 SCN7AQ01118 1682 aa18.92■□□□□ 0.62
TPCN1-213ENST00000550543 A1BGP04217 495 aa18.92■□□□□ 0.62
TPCN1-213ENST00000550543 MASTLQ96GX5 879 aa18.92■□□□□ 0.62
TPCN1-213ENST00000550543 PHACTR3Q96KR7 559 aa18.92■□□□□ 0.62
TPCN1-213ENST00000550543 TAOK3Q9H2K8 898 aa18.92■□□□□ 0.62
TPCN1-213ENST00000550543 NFKBIEO00221 500 aa18.91■□□□□ 0.62
TPCN1-213ENST00000550543 ERFEQ4G0M1 354 aa18.91■□□□□ 0.62
TPCN1-213ENST00000550543 NBPF5PQ86XG9 351 aaPredicted RBP18.91■□□□□ 0.62
TPCN1-213ENST00000550543 PNISRQ8TF01 805 aaKnown RBP18.91■□□□□ 0.62
TPCN1-213ENST00000550543 PNNQ9H307 717 aaKnown RBP18.91■□□□□ 0.62
TPCN1-213ENST00000550543 PPP2R1AP30153 589 aa18.9■□□□□ 0.62
TPCN1-213ENST00000550543 TPTE2Q6XPS3 522 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms