RNA–Protein interactions for RNA: ENST00000550446.5

LETMD1-224, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-224ENST00000550446 TEFQ10587 303 aa25.49■■□□□ 1.67
LETMD1-224ENST00000550446 GAS2L2Q8NHY3 880 aa25.49■■□□□ 1.67
LETMD1-224ENST00000550446 NFIXQ14938 502 aa25.48■■□□□ 1.67
LETMD1-224ENST00000550446 MRC1P22897 1456 aa25.47■■□□□ 1.67
LETMD1-224ENST00000550446 KIAA1551Q9HCM1 1747 aa25.47■■□□□ 1.67
LETMD1-224ENST00000550446 STARD3NLO95772 234 aa25.47■■□□□ 1.67
LETMD1-224ENST00000550446 C9orf131Q5VYM1 1079 aa25.47■■□□□ 1.67
LETMD1-224ENST00000550446 HSPA6P17066 643 aa25.46■■□□□ 1.67
LETMD1-224ENST00000550446 COL15A1P39059 1388 aa25.45■■□□□ 1.67
LETMD1-224ENST00000550446 ZNF496Q96IT1 587 aaPredicted RBP25.45■■□□□ 1.66
LETMD1-224ENST00000550446 CFAP53Q96M91 514 aa25.45■■□□□ 1.66
LETMD1-224ENST00000550446 BCL2L12Q9HB09 334 aa25.45■■□□□ 1.66
LETMD1-224ENST00000550446 KCPQ6ZWJ8 1503 aa25.45■■□□□ 1.66
LETMD1-224ENST00000550446 ZNF790Q6PG37 636 aa25.44■■□□□ 1.66
LETMD1-224ENST00000550446 PHACTR3Q96KR7 559 aa25.44■■□□□ 1.66
LETMD1-224ENST00000550446 COL3A1P02461 1466 aaPredicted RBP25.43■■□□□ 1.66
LETMD1-224ENST00000550446 SERPINB2P05120 415 aa25.43■■□□□ 1.66
LETMD1-224ENST00000550446 BICDL1Q6ZP65 573 aa25.43■■□□□ 1.66
LETMD1-224ENST00000550446 PRKAR2BP31323 418 aa25.42■■□□□ 1.66
LETMD1-224ENST00000550446 EIF5P55010 431 aaKnown RBP25.42■■□□□ 1.66
LETMD1-224ENST00000550446 ZNF330Q9Y3S2 320 aaPredicted RBP25.42■■□□□ 1.66
LETMD1-224ENST00000550446 TEX13AQ9BXU3 409 aaPredicted RBP25.41■■□□□ 1.66
LETMD1-224ENST00000550446 NMRK2Q9NPI5 230 aa25.41■■□□□ 1.66
LETMD1-224ENST00000550446 A0A087WZG4 1122 aa25.4■■□□□ 1.66
LETMD1-224ENST00000550446 RNF181Q9P0P0 153 aa25.4■■□□□ 1.66
LETMD1-224ENST00000550446 NUDCQ9Y266 331 aa25.4■■□□□ 1.66
LETMD1-224ENST00000550446 RSPH6AQ9H0K4 717 aa25.39■■□□□ 1.66
LETMD1-224ENST00000550446 ADAMTS7Q9UKP4 1686 aa25.39■■□□□ 1.65
LETMD1-224ENST00000550446 BTBD11A6QL63 1104 aa25.38■■□□□ 1.65
LETMD1-224ENST00000550446 TOMM70O94826 608 aa25.38■■□□□ 1.65
LETMD1-224ENST00000550446 FMNL2Q96PY5 1086 aa25.38■■□□□ 1.65
LETMD1-224ENST00000550446 TBC1D2BQ9UPU7 963 aa25.38■■□□□ 1.65
LETMD1-224ENST00000550446 HEG1Q9ULI3 1381 aa25.38■■□□□ 1.65
LETMD1-224ENST00000550446 KCNQ3O43525 872 aa25.37■■□□□ 1.65
LETMD1-224ENST00000550446 U2AF1L5P0DN76 240 aaPredicted RBP25.37■■□□□ 1.65
LETMD1-224ENST00000550446 U2AF1Q01081 240 aaKnown RBP eCLIP25.37■■□□□ 1.65
LETMD1-224ENST00000550446 C2CD5Q86YS7 1000 aa25.37■■□□□ 1.65
LETMD1-224ENST00000550446 A1BGP04217 495 aa25.36■■□□□ 1.65
LETMD1-224ENST00000550446 PPP2R1AP30153 589 aa25.36■■□□□ 1.65
LETMD1-224ENST00000550446 TBC1D9BQ66K14 1250 aa25.35■■□□□ 1.65
LETMD1-224ENST00000550446 NPM2Q86SE8 214 aaKnown RBP25.35■■□□□ 1.65
LETMD1-224ENST00000550446 H0YIN7 160 aa25.34■■□□□ 1.65
LETMD1-224ENST00000550446 TTLL6Q8N841 843 aa25.34■■□□□ 1.65
LETMD1-224ENST00000550446 BRCA1P38398 1863 aaKnown RBP25.33■■□□□ 1.65
LETMD1-224ENST00000550446 IL6STP40189 918 aaPredicted RBP25.33■■□□□ 1.65
LETMD1-224ENST00000550446 C16orf71Q8IYS4 520 aaPredicted RBP25.33■■□□□ 1.65
LETMD1-224ENST00000550446 RTF1Q92541 710 aaKnown RBP25.33■■□□□ 1.65
LETMD1-224ENST00000550446 CEMIPQ8WUJ3 1361 aa25.32■■□□□ 1.64
LETMD1-224ENST00000550446 RASSF7Q02833 373 aa25.32■■□□□ 1.64
LETMD1-224ENST00000550446 MCM10Q7L590 875 aa25.32■■□□□ 1.64
LETMD1-224ENST00000550446 CCDC24Q8N4L8 307 aa25.32■■□□□ 1.64
LETMD1-224ENST00000550446 KDM2BQ8NHM5 1336 aa25.32■■□□□ 1.64
LETMD1-224ENST00000550446 VIRMAQ69YN4 1812 aaKnown RBP25.31■■□□□ 1.64
LETMD1-224ENST00000550446 RRAGCQ9HB90 399 aa25.31■■□□□ 1.64
LETMD1-224ENST00000550446 APLP1P51693 650 aa25.3■■□□□ 1.64
LETMD1-224ENST00000550446 ZNF622Q969S3 477 aaKnown RBP eCLIP25.3■■□□□ 1.64
LETMD1-224ENST00000550446 USP16Q9Y5T5 823 aa25.3■■□□□ 1.64
LETMD1-224ENST00000550446 CARMIL3Q8ND23 1372 aa25.29■■□□□ 1.64
LETMD1-224ENST00000550446 UBR2Q8IWV8 1755 aa25.28■■□□□ 1.64
LETMD1-224ENST00000550446 ARFGEF1Q9Y6D6 1849 aa25.28■■□□□ 1.64
LETMD1-224ENST00000550446 PIP4K2AP48426 406 aaPredicted RBP25.28■■□□□ 1.64
LETMD1-224ENST00000550446 DCTN1Q14203 1278 aa25.28■■□□□ 1.64
LETMD1-224ENST00000550446 SETDB2Q96T68 719 aa25.28■■□□□ 1.64
LETMD1-224ENST00000550446 BRIP1Q9BX63 1249 aa25.28■■□□□ 1.64
LETMD1-224ENST00000550446 PRAMEF22A3QJZ6 481 aa25.27■■□□□ 1.64
LETMD1-224ENST00000550446 NPHP1O15259 732 aa25.27■■□□□ 1.64
LETMD1-224ENST00000550446 LMNB1P20700 586 aa25.27■■□□□ 1.64
LETMD1-224ENST00000550446 PDE6BP35913 854 aa25.27■■□□□ 1.64
LETMD1-224ENST00000550446 PRR5LQ6MZQ0 368 aa25.27■■□□□ 1.64
LETMD1-224ENST00000550446 RBM46Q8TBY0 533 aaKnown RBP25.27■■□□□ 1.64
LETMD1-224ENST00000550446 CAMTA2O94983 1202 aa25.26■■□□□ 1.63
LETMD1-224ENST00000550446 DZIP3Q86Y13 1208 aaKnown RBP25.26■■□□□ 1.63
LETMD1-224ENST00000550446 ZNF219Q9P2Y4 722 aaPredicted RBP25.26■■□□□ 1.63
LETMD1-224ENST00000550446 AFDNP55196 1824 aaKnown RBP25.26■■□□□ 1.63
LETMD1-224ENST00000550446 SNRPA1P09661 255 aaKnown RBP25.25■■□□□ 1.63
LETMD1-224ENST00000550446 PRELPP51888 382 aa25.25■■□□□ 1.63
LETMD1-224ENST00000550446 PDZRN3Q9UPQ7 1066 aa25.23■■□□□ 1.63
LETMD1-224ENST00000550446 HTATSF1O43719 755 aaKnown RBP25.22■■□□□ 1.63
LETMD1-224ENST00000550446 C21orf2O43822 256 aa25.22■■□□□ 1.63
LETMD1-224ENST00000550446 CNBD1Q8NA66 436 aa25.22■■□□□ 1.63
LETMD1-224ENST00000550446 NRXN2Q9P2S2 1712 aa25.22■■□□□ 1.63
LETMD1-224ENST00000550446 NFKBIEO00221 500 aa25.21■■□□□ 1.63
LETMD1-224ENST00000550446 MIS18AQ9NYP9 233 aa25.21■■□□□ 1.63
LETMD1-224ENST00000550446 ST5P78524 1137 aa25.2■■□□□ 1.62
LETMD1-224ENST00000550446 FSTL1Q12841 308 aa25.2■■□□□ 1.62
LETMD1-224ENST00000550446 TAF7Q15545 349 aaPredicted RBP25.2■■□□□ 1.62
LETMD1-224ENST00000550446 DNAJC5GQ8N7S2 189 aa25.2■■□□□ 1.62
LETMD1-224ENST00000550446 SIPA1L3O60292 1781 aaPredicted RBP25.19■■□□□ 1.62
LETMD1-224ENST00000550446 GLTPD2A6NH11 291 aa25.19■■□□□ 1.62
LETMD1-224ENST00000550446 ZC3H4Q9UPT8 1303 aaKnown RBP25.18■■□□□ 1.62
LETMD1-224ENST00000550446 NEFMP07197 916 aa25.18■■□□□ 1.62
LETMD1-224ENST00000550446 HTRA3P83110 453 aa25.17■■□□□ 1.62
LETMD1-224ENST00000550446 CLEC4GQ6UXB4 293 aa25.17■■□□□ 1.62
LETMD1-224ENST00000550446 NBPF5PQ86XG9 351 aaPredicted RBP25.17■■□□□ 1.62
LETMD1-224ENST00000550446 NBPF26B4DH59 902 aa25.16■■□□□ 1.62
LETMD1-224ENST00000550446 SBF1O95248 1867 aa25.16■■□□□ 1.62
LETMD1-224ENST00000550446 VEGFAP15692 232 aaPredicted RBP25.16■■□□□ 1.62
LETMD1-224ENST00000550446 IFFO2Q5TF58 517 aa25.16■■□□□ 1.62
LETMD1-224ENST00000550446 NBPF10Q6P3W6 841 aaKnown RBP25.16■■□□□ 1.62
LETMD1-224ENST00000550446 NBPF15Q8N660 670 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms