RNA–Protein interactions for RNA: ENST00000550367.1

TUBA1B-206, Transcript of tubulin alpha 1b, humanhuman

TSL 3

Gene TUBA1B, Length 835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-206ENST00000550367 VEGFAP15692 232 aaPredicted RBP13.19□□□□□ -0.3
TUBA1B-206ENST00000550367 LMNB1P20700 586 aa13.19□□□□□ -0.3
TUBA1B-206ENST00000550367 SLC39A6Q13433 755 aa13.19□□□□□ -0.3
TUBA1B-206ENST00000550367 SULT6B1Q6IMI4 303 aa13.19□□□□□ -0.3
TUBA1B-206ENST00000550367 BCL2L12Q9HB09 334 aa13.19□□□□□ -0.3
TUBA1B-206ENST00000550367 LGR6Q9HBX8 967 aa13.19□□□□□ -0.3
TUBA1B-206ENST00000550367 CARMIL3Q8ND23 1372 aa13.19□□□□□ -0.3
TUBA1B-206ENST00000550367 AFDNP55196 1824 aaKnown RBP13.18□□□□□ -0.3
TUBA1B-206ENST00000550367 NFKBIEO00221 500 aa13.18□□□□□ -0.3
TUBA1B-206ENST00000550367 SERPINB2P05120 415 aa13.18□□□□□ -0.3
TUBA1B-206ENST00000550367 CYP19A1P11511 503 aaPredicted RBP13.17□□□□□ -0.3
TUBA1B-206ENST00000550367 C2CD5Q86YS7 1000 aa13.17□□□□□ -0.3
TUBA1B-206ENST00000550367 CCDC24Q8N4L8 307 aa13.17□□□□□ -0.3
TUBA1B-206ENST00000550367 TTLL6Q8N841 843 aa13.17□□□□□ -0.3
TUBA1B-206ENST00000550367 ZNF219Q9P2Y4 722 aaPredicted RBP13.17□□□□□ -0.3
TUBA1B-206ENST00000550367 NARFQ9UHQ1 456 aa13.17□□□□□ -0.3
TUBA1B-206ENST00000550367 ZBTB1Q9Y2K1 713 aa13.17□□□□□ -0.3
TUBA1B-206ENST00000550367 CCDC88AQ3V6T2 1871 aa13.16□□□□□ -0.3
TUBA1B-206ENST00000550367 BICDL1Q6ZP65 573 aa13.16□□□□□ -0.3
TUBA1B-206ENST00000550367 PANK3Q9H999 370 aa13.16□□□□□ -0.3
TUBA1B-206ENST00000550367 TIAM2Q8IVF5 1701 aa13.16□□□□□ -0.3
TUBA1B-206ENST00000550367 ZC3H4Q9UPT8 1303 aaKnown RBP13.15□□□□□ -0.3
TUBA1B-206ENST00000550367 POTEIP0CG38 1075 aa13.15□□□□□ -0.3
TUBA1B-206ENST00000550367 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
TUBA1B-206ENST00000550367 SLC52A2Q9HAB3 445 aa13.15□□□□□ -0.3
TUBA1B-206ENST00000550367 MKRN1Q9UHC7 482 aaKnown RBP13.15□□□□□ -0.3
TUBA1B-206ENST00000550367 COL15A1P39059 1388 aa13.15□□□□□ -0.3
TUBA1B-206ENST00000550367 SCN11AQ9UI33 1791 aa13.15□□□□□ -0.31
TUBA1B-206ENST00000550367 NRXN2Q9P2S2 1712 aa13.14□□□□□ -0.31
TUBA1B-206ENST00000550367 CANXP27824 592 aaKnown RBP13.14□□□□□ -0.31
TUBA1B-206ENST00000550367 DLEC1Q9Y238 1755 aa13.13□□□□□ -0.31
TUBA1B-206ENST00000550367 H0YIN7 160 aa13.13□□□□□ -0.31
TUBA1B-206ENST00000550367 RNMTO43148 476 aaKnown RBP13.13□□□□□ -0.31
TUBA1B-206ENST00000550367 C21orf2O43822 256 aa13.13□□□□□ -0.31
TUBA1B-206ENST00000550367 IL13P35225 146 aa13.13□□□□□ -0.31
TUBA1B-206ENST00000550367 MORC1Q86VD1 984 aa13.13□□□□□ -0.31
TUBA1B-206ENST00000550367 HMOX1P09601 288 aa13.12□□□□□ -0.31
TUBA1B-206ENST00000550367 AKAP4Q5JQC9 854 aa13.12□□□□□ -0.31
TUBA1B-206ENST00000550367 ZNF622Q969S3 477 aaKnown RBP eCLIP13.12□□□□□ -0.31
TUBA1B-206ENST00000550367 DDNO94850 711 aaPredicted RBP13.11□□□□□ -0.31
TUBA1B-206ENST00000550367 ERFEQ4G0M1 354 aa13.11□□□□□ -0.31
TUBA1B-206ENST00000550367 TBC1D9BQ66K14 1250 aa13.11□□□□□ -0.31
TUBA1B-206ENST00000550367 DPY19L2Q6NUT2 758 aa13.11□□□□□ -0.31
TUBA1B-206ENST00000550367 ANKRD31Q8N7Z5 1873 aa13.1□□□□□ -0.31
TUBA1B-206ENST00000550367 FOXN1O15353 648 aa13.09□□□□□ -0.31
TUBA1B-206ENST00000550367 MTHFSDQ2M296 383 aaKnown RBP13.09□□□□□ -0.31
TUBA1B-206ENST00000550367 PRR5LQ6MZQ0 368 aa13.09□□□□□ -0.31
TUBA1B-206ENST00000550367 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
TUBA1B-206ENST00000550367 TBC1D2BQ9UPU7 963 aa13.09□□□□□ -0.31
TUBA1B-206ENST00000550367 COL11A2P13942 1736 aaPredicted RBP13.08□□□□□ -0.32
TUBA1B-206ENST00000550367 EIF5P55010 431 aaKnown RBP13.08□□□□□ -0.32
TUBA1B-206ENST00000550367 CREBZFQ9NS37 354 aa13.08□□□□□ -0.32
TUBA1B-206ENST00000550367 ZNF330Q9Y3S2 320 aaPredicted RBP13.08□□□□□ -0.32
TUBA1B-206ENST00000550367 MRC1P22897 1456 aa13.08□□□□□ -0.32
TUBA1B-206ENST00000550367 HSPA5P11021 654 aaKnown RBP13.07□□□□□ -0.32
TUBA1B-206ENST00000550367 VIRMAQ69YN4 1812 aaKnown RBP13.06□□□□□ -0.32
TUBA1B-206ENST00000550367 FER1L6Q2WGJ9 1857 aa13.06□□□□□ -0.32
TUBA1B-206ENST00000550367 BRIP1Q9BX63 1249 aa13.06□□□□□ -0.32
TUBA1B-206ENST00000550367 TAOK3Q9H2K8 898 aa13.06□□□□□ -0.32
TUBA1B-206ENST00000550367 DICER1Q9UPY3 1922 aaKnown RBP13.05□□□□□ -0.32
TUBA1B-206ENST00000550367 SLX4Q8IY92 1834 aa13.05□□□□□ -0.32
TUBA1B-206ENST00000550367 PDE6BP35913 854 aa13.05□□□□□ -0.32
TUBA1B-206ENST00000550367 VSIG10Q8N0Z9 540 aa13.05□□□□□ -0.32
TUBA1B-206ENST00000550367 ZNF496Q96IT1 587 aaPredicted RBP13.05□□□□□ -0.32
TUBA1B-206ENST00000550367 CNTNAP1P78357 1384 aa13.05□□□□□ -0.32
TUBA1B-206ENST00000550367 STARD3NLO95772 234 aa13.04□□□□□ -0.32
TUBA1B-206ENST00000550367 A1BGP04217 495 aa13.04□□□□□ -0.32
TUBA1B-206ENST00000550367 VEGFBP49765 207 aa13.04□□□□□ -0.32
TUBA1B-206ENST00000550367 PRPF40BQ6NWY9 871 aaKnown RBP13.04□□□□□ -0.32
TUBA1B-206ENST00000550367 PASKQ96RG2 1323 aa13.04□□□□□ -0.32
TUBA1B-206ENST00000550367 UBR2Q8IWV8 1755 aa13.04□□□□□ -0.32
TUBA1B-206ENST00000550367 CACNA1SQ13698 1873 aa13.04□□□□□ -0.32
TUBA1B-206ENST00000550367 A0A087WZG4 1122 aa13.03□□□□□ -0.32
TUBA1B-206ENST00000550367 PIP4K2AP48426 406 aaPredicted RBP13.03□□□□□ -0.32
TUBA1B-206ENST00000550367 OLFM4Q6UX06 510 aa13.03□□□□□ -0.32
TUBA1B-206ENST00000550367 TTC5Q8N0Z6 440 aa13.03□□□□□ -0.32
TUBA1B-206ENST00000550367 TAF1DQ9H5J8 278 aaPredicted RBP13.03□□□□□ -0.32
TUBA1B-206ENST00000550367 KNSTRNQ9Y448 316 aa13.03□□□□□ -0.32
TUBA1B-206ENST00000550367 ITGBL1O95965 494 aaPredicted RBP13.02□□□□□ -0.33
TUBA1B-206ENST00000550367 SRGNP10124 158 aa13.02□□□□□ -0.33
TUBA1B-206ENST00000550367 LBX1P52954 281 aa13.02□□□□□ -0.33
TUBA1B-206ENST00000550367 EIF4G2P78344 907 aaKnown RBP eCLIP13.02□□□□□ -0.33
TUBA1B-206ENST00000550367 EAPPQ56P03 285 aaPredicted RBP13.02□□□□□ -0.33
TUBA1B-206ENST00000550367 CNBD1Q8NA66 436 aa13.02□□□□□ -0.33
TUBA1B-206ENST00000550367 IL17REQ8NFR9 667 aa13.02□□□□□ -0.33
TUBA1B-206ENST00000550367 LTBP3Q9NS15 1303 aa13.02□□□□□ -0.33
TUBA1B-206ENST00000550367 HEG1Q9ULI3 1381 aa13.02□□□□□ -0.33
TUBA1B-206ENST00000550367 SCN7AQ01118 1682 aa13.02□□□□□ -0.33
TUBA1B-206ENST00000550367 NPHP1O15259 732 aa13.01□□□□□ -0.33
TUBA1B-206ENST00000550367 KCNQ3O43525 872 aa13.01□□□□□ -0.33
TUBA1B-206ENST00000550367 CAMTA2O94983 1202 aa13.01□□□□□ -0.33
TUBA1B-206ENST00000550367 AMER1Q5JTC6 1135 aaPredicted RBP13.01□□□□□ -0.33
TUBA1B-206ENST00000550367 LDHDQ86WU2 507 aa13.01□□□□□ -0.33
TUBA1B-206ENST00000550367 CNKSR1Q969H4 720 aa13.01□□□□□ -0.33
TUBA1B-206ENST00000550367 SETDB2Q96T68 719 aa13.01□□□□□ -0.33
TUBA1B-206ENST00000550367 PRDM10Q9NQV6 1147 aa13.01□□□□□ -0.33
TUBA1B-206ENST00000550367 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
TUBA1B-206ENST00000550367 ZNF541Q9H0D2 1346 aa13.01□□□□□ -0.33
TUBA1B-206ENST00000550367 TMEM88BA6NKF7 163 aa13□□□□□ -0.33
TUBA1B-206ENST00000550367 IL6STP40189 918 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms