RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 STK31Q9BXU1 1019 aa12.49□□□□□ -0.41
ERBB3-214ENST00000550070 ZNF500O60304 480 aaPredicted RBP12.49□□□□□ -0.41
ERBB3-214ENST00000550070 MCCP23508 829 aa12.49□□□□□ -0.41
ERBB3-214ENST00000550070 FKBP5Q13451 457 aaPredicted RBP12.49□□□□□ -0.41
ERBB3-214ENST00000550070 XRN1Q8IZH2 1706 aaKnown RBP12.49□□□□□ -0.41
ERBB3-214ENST00000550070 SSH2Q76I76 1423 aa12.48□□□□□ -0.41
ERBB3-214ENST00000550070 MBD3O95983 291 aa12.48□□□□□ -0.41
ERBB3-214ENST00000550070 GNAI3P08754 354 aa12.48□□□□□ -0.41
ERBB3-214ENST00000550070 ANAPC15P60006 121 aa12.48□□□□□ -0.41
ERBB3-214ENST00000550070 INTS4Q96HW7 963 aaKnown RBP12.48□□□□□ -0.41
ERBB3-214ENST00000550070 EYA1Q99502 592 aa12.48□□□□□ -0.41
ERBB3-214ENST00000550070 IL25Q9H293 177 aa12.48□□□□□ -0.41
ERBB3-214ENST00000550070 STAP2Q9UGK3 403 aa12.48□□□□□ -0.41
ERBB3-214ENST00000550070 CEP170BQ9Y4F5 1589 aaPredicted RBP12.48□□□□□ -0.41
ERBB3-214ENST00000550070 ADAMTS13Q76LX8 1427 aa12.48□□□□□ -0.41
ERBB3-214ENST00000550070 XPCQ01831 940 aaPredicted RBP12.48□□□□□ -0.41
ERBB3-214ENST00000550070 UPF3BQ9BZI7 483 aaKnown RBP12.48□□□□□ -0.41
ERBB3-214ENST00000550070 LRRFIP2Q9Y608 721 aaKnown RBP12.48□□□□□ -0.41
ERBB3-214ENST00000550070 KDRP35968 1356 aa12.48□□□□□ -0.41
ERBB3-214ENST00000550070 RNF214Q8ND24 703 aa12.47□□□□□ -0.41
ERBB3-214ENST00000550070 ZNF526Q8TF50 670 aaPredicted RBP12.47□□□□□ -0.41
ERBB3-214ENST00000550070 ARID3AQ99856 593 aa12.47□□□□□ -0.41
ERBB3-214ENST00000550070 CCDC30Q5VVM6 783 aa12.47□□□□□ -0.41
ERBB3-214ENST00000550070 IL17RAQ96F46 866 aa12.47□□□□□ -0.41
ERBB3-214ENST00000550070 ZKSCAN5Q9Y2L8 839 aa12.47□□□□□ -0.41
ERBB3-214ENST00000550070 R3HCC1Q9Y3T6 440 aaKnown RBP12.47□□□□□ -0.41
ERBB3-214ENST00000550070 FAM208AQ9UK61 1670 aaKnown RBP12.47□□□□□ -0.41
ERBB3-214ENST00000550070 TMEM2Q9UHN6 1383 aa12.46□□□□□ -0.41
ERBB3-214ENST00000550070 FOXD4L6Q3SYB3 417 aaPredicted RBP12.46□□□□□ -0.41
ERBB3-214ENST00000550070 FOXD4L3Q6VB84 417 aaPredicted RBP12.46□□□□□ -0.41
ERBB3-214ENST00000550070 IGSF1Q8N6C5 1336 aa12.46□□□□□ -0.41
ERBB3-214ENST00000550070 SBNO1A3KN83 1393 aa12.46□□□□□ -0.41
ERBB3-214ENST00000550070 FLT4P35916 1363 aa12.46□□□□□ -0.41
ERBB3-214ENST00000550070 GDPD2Q9HCC8 539 aa12.46□□□□□ -0.41
ERBB3-214ENST00000550070 GADD45BO75293 160 aaPredicted RBP12.46□□□□□ -0.42
ERBB3-214ENST00000550070 TERF1P54274 439 aa12.46□□□□□ -0.42
ERBB3-214ENST00000550070 SRCIN1Q9C0H9 1055 aa12.46□□□□□ -0.42
ERBB3-214ENST00000550070 USP44Q9H0E7 712 aa12.46□□□□□ -0.42
ERBB3-214ENST00000550070 IL1RAPL2Q9NP60 686 aa12.46□□□□□ -0.42
ERBB3-214ENST00000550070 AMPHP49418 695 aa12.45□□□□□ -0.42
ERBB3-214ENST00000550070 TCHHQ07283 1943 aa12.45□□□□□ -0.42
ERBB3-214ENST00000550070 UBR1Q8IWV7 1749 aa12.45□□□□□ -0.42
ERBB3-214ENST00000550070 LRRC37A3O60309 1634 aa12.45□□□□□ -0.42
ERBB3-214ENST00000550070 TNRQ92752 1358 aa12.44□□□□□ -0.42
ERBB3-214ENST00000550070 NUTM1Q86Y26 1132 aa12.44□□□□□ -0.42
ERBB3-214ENST00000550070 TSPY26PQ9H489 355 aa12.44□□□□□ -0.42
ERBB3-214ENST00000550070 TTC21AQ8NDW8 1320 aa12.44□□□□□ -0.42
ERBB3-214ENST00000550070 GNAT3A8MTJ3 354 aa12.44□□□□□ -0.42
ERBB3-214ENST00000550070 HTATSF1O43719 755 aaKnown RBP12.44□□□□□ -0.42
ERBB3-214ENST00000550070 MAP4K4O95819 1239 aaPredicted RBP12.44□□□□□ -0.42
ERBB3-214ENST00000550070 LTKP29376 864 aa12.44□□□□□ -0.42
ERBB3-214ENST00000550070 HSPA4P34932 840 aa12.44□□□□□ -0.42
ERBB3-214ENST00000550070 USP48Q86UV5 1035 aa12.44□□□□□ -0.42
ERBB3-214ENST00000550070 PDCL3Q9H2J4 239 aa12.44□□□□□ -0.42
ERBB3-214ENST00000550070 CCDC39Q9UFE4 941 aa12.44□□□□□ -0.42
ERBB3-214ENST00000550070 CACNA1FO60840 1977 aa12.44□□□□□ -0.42
ERBB3-214ENST00000550070 IL17REQ8NFR9 667 aa12.43□□□□□ -0.42
ERBB3-214ENST00000550070 PTPRUQ92729 1446 aa12.43□□□□□ -0.42
ERBB3-214ENST00000550070 UBTFL1P0CB47 393 aaPredicted RBP12.43□□□□□ -0.42
ERBB3-214ENST00000550070 MCM5P33992 734 aa12.43□□□□□ -0.42
ERBB3-214ENST00000550070 SSH3Q8TE77 659 aa12.43□□□□□ -0.42
ERBB3-214ENST00000550070 AOX1Q06278 1338 aa12.43□□□□□ -0.42
ERBB3-214ENST00000550070 N4BP2Q86UW6 1770 aaPredicted RBP12.43□□□□□ -0.42
ERBB3-214ENST00000550070 PHAXQ9H814 394 aaKnown RBP12.42□□□□□ -0.42
ERBB3-214ENST00000550070 SOS1Q07889 1333 aaPredicted RBP12.42□□□□□ -0.42
ERBB3-214ENST00000550070 RGPD8O14715 1765 aaPredicted RBP12.42□□□□□ -0.42
ERBB3-214ENST00000550070 SLC26A8Q96RN1 970 aa12.42□□□□□ -0.42
ERBB3-214ENST00000550070 PPP1R42Q7Z4L9 355 aa12.41□□□□□ -0.42
ERBB3-214ENST00000550070 PI4K2BQ8TCG2 481 aa12.41□□□□□ -0.42
ERBB3-214ENST00000550070 SYAP1Q96A49 352 aaPredicted RBP12.41□□□□□ -0.42
ERBB3-214ENST00000550070 RBM33Q96EV2 1170 aaKnown RBP12.41□□□□□ -0.42
ERBB3-214ENST00000550070 WDR33Q9C0J8 1336 aaKnown RBP12.41□□□□□ -0.42
ERBB3-214ENST00000550070 RPAP1Q9BWH6 1393 aaPredicted RBP12.41□□□□□ -0.42
ERBB3-214ENST00000550070 FER1L4A9Z1Z3 1794 aa12.41□□□□□ -0.42
ERBB3-214ENST00000550070 EPB41L2O43491 1005 aaKnown RBP12.41□□□□□ -0.42
ERBB3-214ENST00000550070 SURF6O75683 361 aaKnown RBP12.41□□□□□ -0.42
ERBB3-214ENST00000550070 PTMAP06454 111 aaKnown RBP12.41□□□□□ -0.42
ERBB3-214ENST00000550070 NGDNQ8NEJ9 315 aaKnown RBP12.41□□□□□ -0.42
ERBB3-214ENST00000550070 PXDNLA1KZ92 1463 aa12.4□□□□□ -0.42
ERBB3-214ENST00000550070 TAF7Q15545 349 aaPredicted RBP12.4□□□□□ -0.42
ERBB3-214ENST00000550070 SNX14Q9Y5W7 946 aa12.4□□□□□ -0.42
ERBB3-214ENST00000550070 PLEKHG1Q9ULL1 1385 aa12.4□□□□□ -0.42
ERBB3-214ENST00000550070 SGSM2O43147 1006 aa12.4□□□□□ -0.42
ERBB3-214ENST00000550070 POLA2Q14181 598 aa12.4□□□□□ -0.42
ERBB3-214ENST00000550070 RHPN1Q8TCX5 695 aa12.4□□□□□ -0.42
ERBB3-214ENST00000550070 TTC14Q96N46 770 aa12.4□□□□□ -0.42
ERBB3-214ENST00000550070 LARP6Q9BRS8 491 aaKnown RBP12.4□□□□□ -0.42
ERBB3-214ENST00000550070 PIK3C2AO00443 1686 aa12.4□□□□□ -0.42
ERBB3-214ENST00000550070 RAD50Q92878 1312 aa12.39□□□□□ -0.43
ERBB3-214ENST00000550070 UQCRHLA0A096LP55 91 aa12.39□□□□□ -0.43
ERBB3-214ENST00000550070 RAB11FIP3O75154 756 aa12.39□□□□□ -0.43
ERBB3-214ENST00000550070 UQCRHP07919 91 aa12.39□□□□□ -0.43
ERBB3-214ENST00000550070 CSPP1Q1MSJ5 1256 aa12.39□□□□□ -0.43
ERBB3-214ENST00000550070 MAP3K5Q99683 1374 aa12.39□□□□□ -0.43
ERBB3-214ENST00000550070 HDGFL1Q5TGJ6 251 aa12.39□□□□□ -0.43
ERBB3-214ENST00000550070 CC2D2BQ6DHV5 1058 aa12.39□□□□□ -0.43
ERBB3-214ENST00000550070 RASEFQ8IZ41 740 aa12.39□□□□□ -0.43
ERBB3-214ENST00000550070 LSG1Q9H089 658 aaKnown RBP12.39□□□□□ -0.43
ERBB3-214ENST00000550070 CNPY2Q9Y2B0 182 aa12.39□□□□□ -0.43
ERBB3-214ENST00000550070 NWD1Q149M9 1564 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms