RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 UBR2Q8IWV8 1755 aa18.36■□□□□ 0.53
TROAP-211ENST00000549891 VSIG10Q8N0Z9 540 aa18.36■□□□□ 0.53
TROAP-211ENST00000549891 COL15A1P39059 1388 aa18.35■□□□□ 0.53
TROAP-211ENST00000549891 MTHFSDQ2M296 383 aaKnown RBP18.35■□□□□ 0.53
TROAP-211ENST00000549891 C16orf71Q8IYS4 520 aaPredicted RBP18.35■□□□□ 0.53
TROAP-211ENST00000549891 NARFQ9UHQ1 456 aa18.35■□□□□ 0.53
TROAP-211ENST00000549891 NRXN2Q9P2S2 1712 aa18.35■□□□□ 0.53
TROAP-211ENST00000549891 KDM2BQ8NHM5 1336 aa18.34■□□□□ 0.53
TROAP-211ENST00000549891 NMRK2Q9NPI5 230 aa18.34■□□□□ 0.53
TROAP-211ENST00000549891 DLEC1Q9Y238 1755 aa18.34■□□□□ 0.53
TROAP-211ENST00000549891 PER1O15534 1290 aaPredicted RBP18.33■□□□□ 0.52
TROAP-211ENST00000549891 CHRNA5P30532 468 aa18.33■□□□□ 0.52
TROAP-211ENST00000549891 CC2D1BQ5T0F9 858 aaKnown RBP18.33■□□□□ 0.52
TROAP-211ENST00000549891 TTC5Q8N0Z6 440 aa18.33■□□□□ 0.52
TROAP-211ENST00000549891 TNRC6CQ9HCJ0 1690 aaKnown RBP18.33■□□□□ 0.52
TROAP-211ENST00000549891 RBM46Q8TBY0 533 aaKnown RBP18.32■□□□□ 0.52
TROAP-211ENST00000549891 RNF181Q9P0P0 153 aa18.32■□□□□ 0.52
TROAP-211ENST00000549891 ZBTB1Q9Y2K1 713 aa18.32■□□□□ 0.52
TROAP-211ENST00000549891 STARD3NLO95772 234 aa18.31■□□□□ 0.52
TROAP-211ENST00000549891 NFIXQ14938 502 aa18.31■□□□□ 0.52
TROAP-211ENST00000549891 WDR90Q96KV7 1748 aa18.3■□□□□ 0.52
TROAP-211ENST00000549891 NPC1L1Q9UHC9 1359 aa18.3■□□□□ 0.52
TROAP-211ENST00000549891 ZC3H4Q9UPT8 1303 aaKnown RBP18.29■□□□□ 0.52
TROAP-211ENST00000549891 A0A087WZG4 1122 aa18.29■□□□□ 0.52
TROAP-211ENST00000549891 SERPINB2P05120 415 aa18.29■□□□□ 0.52
TROAP-211ENST00000549891 TEFQ10587 303 aa18.29■□□□□ 0.52
TROAP-211ENST00000549891 GAS2L2Q8NHY3 880 aa18.29■□□□□ 0.52
TROAP-211ENST00000549891 TEX13AQ9BXU3 409 aaPredicted RBP18.29■□□□□ 0.52
TROAP-211ENST00000549891 CCDC88AQ3V6T2 1871 aa18.29■□□□□ 0.52
TROAP-211ENST00000549891 SIPA1L3O60292 1781 aaPredicted RBP18.28■□□□□ 0.52
TROAP-211ENST00000549891 GNAT3A8MTJ3 354 aa18.28■□□□□ 0.52
TROAP-211ENST00000549891 U2SURPO15042 1029 aaKnown RBP18.28■□□□□ 0.52
TROAP-211ENST00000549891 CANXP27824 592 aaKnown RBP18.28■□□□□ 0.52
TROAP-211ENST00000549891 FSTL1Q12841 308 aa18.28■□□□□ 0.52
TROAP-211ENST00000549891 COL3A1P02461 1466 aaPredicted RBP18.27■□□□□ 0.52
TROAP-211ENST00000549891 BCL2L12Q9HB09 334 aa18.27■□□□□ 0.52
TROAP-211ENST00000549891 H0YIN7 160 aa18.26■□□□□ 0.51
TROAP-211ENST00000549891 EIF5P55010 431 aaKnown RBP18.26■□□□□ 0.51
TROAP-211ENST00000549891 ZNF790Q6PG37 636 aa18.26■□□□□ 0.51
TROAP-211ENST00000549891 TTLL6Q8N841 843 aa18.26■□□□□ 0.51
TROAP-211ENST00000549891 SCN7AQ01118 1682 aa18.25■□□□□ 0.51
TROAP-211ENST00000549891 LMNB1P20700 586 aa18.25■□□□□ 0.51
TROAP-211ENST00000549891 NPM2Q86SE8 214 aaKnown RBP18.25■□□□□ 0.51
TROAP-211ENST00000549891 RRAGCQ9HB90 399 aa18.25■□□□□ 0.51
TROAP-211ENST00000549891 PDZRN3Q9UPQ7 1066 aa18.25■□□□□ 0.51
TROAP-211ENST00000549891 HEG1Q9ULI3 1381 aa18.25■□□□□ 0.51
TROAP-211ENST00000549891 C2CD5Q86YS7 1000 aa18.24■□□□□ 0.51
TROAP-211ENST00000549891 DNAJC5GQ8N7S2 189 aa18.24■□□□□ 0.51
TROAP-211ENST00000549891 ZNF496Q96IT1 587 aaPredicted RBP18.24■□□□□ 0.51
TROAP-211ENST00000549891 TIAM2Q8IVF5 1701 aa18.23■□□□□ 0.51
TROAP-211ENST00000549891 RASSF7Q02833 373 aa18.23■□□□□ 0.51
TROAP-211ENST00000549891 BICDL1Q6ZP65 573 aa18.23■□□□□ 0.51
TROAP-211ENST00000549891 IL17REQ8NFR9 667 aa18.23■□□□□ 0.51
TROAP-211ENST00000549891 ANKRD31Q8N7Z5 1873 aa18.22■□□□□ 0.51
TROAP-211ENST00000549891 PDE6BP35913 854 aa18.22■□□□□ 0.51
TROAP-211ENST00000549891 IL6STP40189 918 aaPredicted RBP18.22■□□□□ 0.51
TROAP-211ENST00000549891 CNGB1Q14028 1251 aaPredicted RBP18.22■□□□□ 0.51
TROAP-211ENST00000549891 CFAP53Q96M91 514 aa18.22■□□□□ 0.51
TROAP-211ENST00000549891 FMNL2Q96PY5 1086 aa18.22■□□□□ 0.51
TROAP-211ENST00000549891 ZNF330Q9Y3S2 320 aaPredicted RBP18.22■□□□□ 0.51
TROAP-211ENST00000549891 CARMIL3Q8ND23 1372 aa18.21■□□□□ 0.51
TROAP-211ENST00000549891 SMC1BQ8NDV3 1235 aa18.21■□□□□ 0.51
TROAP-211ENST00000549891 DICER1Q9UPY3 1922 aaKnown RBP18.21■□□□□ 0.51
TROAP-211ENST00000549891 CEMIPQ8WUJ3 1361 aa18.2■□□□□ 0.5
TROAP-211ENST00000549891 GLTPD2A6NH11 291 aa18.2■□□□□ 0.5
TROAP-211ENST00000549891 TBC1D9BQ66K14 1250 aa18.2■□□□□ 0.5
TROAP-211ENST00000549891 BRIP1Q9BX63 1249 aa18.2■□□□□ 0.5
TROAP-211ENST00000549891 BTBD11A6QL63 1104 aa18.19■□□□□ 0.5
TROAP-211ENST00000549891 VEGFAP15692 232 aaPredicted RBP18.19■□□□□ 0.5
TROAP-211ENST00000549891 ZNF622Q969S3 477 aaKnown RBP eCLIP18.19■□□□□ 0.5
TROAP-211ENST00000549891 TBC1D2BQ9UPU7 963 aa18.19■□□□□ 0.5
TROAP-211ENST00000549891 NUDCQ9Y266 331 aa18.19■□□□□ 0.5
TROAP-211ENST00000549891 BCORQ6W2J9 1755 aa18.19■□□□□ 0.5
TROAP-211ENST00000549891 FER1L6Q2WGJ9 1857 aa18.18■□□□□ 0.5
TROAP-211ENST00000549891 NPHP1O15259 732 aa18.18■□□□□ 0.5
TROAP-211ENST00000549891 KLRG1Q96E93 195 aa18.18■□□□□ 0.5
TROAP-211ENST00000549891 SETDB2Q96T68 719 aa18.18■□□□□ 0.5
TROAP-211ENST00000549891 CACNA1SQ13698 1873 aa18.18■□□□□ 0.5
TROAP-211ENST00000549891 COL11A2P13942 1736 aaPredicted RBP18.18■□□□□ 0.5
TROAP-211ENST00000549891 PRKAR2BP31323 418 aa18.17■□□□□ 0.5
TROAP-211ENST00000549891 PRR5LQ6MZQ0 368 aa18.17■□□□□ 0.5
TROAP-211ENST00000549891 DPY19L2Q6NUT2 758 aa18.17■□□□□ 0.5
TROAP-211ENST00000549891 NFKBIEO00221 500 aa18.16■□□□□ 0.5
TROAP-211ENST00000549891 ST5P78524 1137 aa18.16■□□□□ 0.5
TROAP-211ENST00000549891 CNBD1Q8NA66 436 aa18.16■□□□□ 0.5
TROAP-211ENST00000549891 RTF1Q92541 710 aaKnown RBP18.16■□□□□ 0.5
TROAP-211ENST00000549891 RSPH6AQ9H0K4 717 aa18.16■□□□□ 0.5
TROAP-211ENST00000549891 ARFGEF2Q9Y6D5 1785 aa18.15■□□□□ 0.5
TROAP-211ENST00000549891 A1BGP04217 495 aa18.15■□□□□ 0.5
TROAP-211ENST00000549891 PRELPP51888 382 aa18.15■□□□□ 0.5
TROAP-211ENST00000549891 PHACTR3Q96KR7 559 aa18.15■□□□□ 0.5
TROAP-211ENST00000549891 CAMTA2O94983 1202 aa18.14■□□□□ 0.49
TROAP-211ENST00000549891 HTRA3P83110 453 aa18.14■□□□□ 0.49
TROAP-211ENST00000549891 DZIP3Q86Y13 1208 aaKnown RBP18.14■□□□□ 0.49
TROAP-211ENST00000549891 JMYQ8N9B5 988 aa18.14■□□□□ 0.49
TROAP-211ENST00000549891 CNKSR1Q969H4 720 aa18.14■□□□□ 0.49
TROAP-211ENST00000549891 C21orf2O43822 256 aa18.13■□□□□ 0.49
TROAP-211ENST00000549891 SOGA3Q5TF21 947 aa18.13■□□□□ 0.49
TROAP-211ENST00000549891 ZNF652Q9Y2D9 606 aa18.13■□□□□ 0.49
TROAP-211ENST00000549891 SLX4Q8IY92 1834 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms