RNA–Protein interactions for RNA: ENST00000549842.1

CPNE8-206, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-206ENST00000549842 USP17L21D6R901 530 aa7.31□□□□□ -1.24
CPNE8-206ENST00000549842 USP17L18D6R9N7 530 aa7.31□□□□□ -1.24
CPNE8-206ENST00000549842 USP17L22D6RA61 530 aa7.31□□□□□ -1.24
CPNE8-206ENST00000549842 USP17L17D6RBQ6 530 aa7.31□□□□□ -1.24
CPNE8-206ENST00000549842 USP17L19D6RCP7 530 aa7.31□□□□□ -1.24
CPNE8-206ENST00000549842 USP17L20D6RJB6 530 aa7.31□□□□□ -1.24
CPNE8-206ENST00000549842 H7C1W4 665 aa7.31□□□□□ -1.24
CPNE8-206ENST00000549842 USP17L24Q0WX57 530 aa7.31□□□□□ -1.24
CPNE8-206ENST00000549842 LBRQ14739 615 aaKnown RBP7.31□□□□□ -1.24
CPNE8-206ENST00000549842 TEAD4Q15561 434 aa7.31□□□□□ -1.24
CPNE8-206ENST00000549842 TRIM22Q8IYM9 498 aa7.31□□□□□ -1.24
CPNE8-206ENST00000549842 ZNF594Q96JF6 807 aaPredicted RBP7.31□□□□□ -1.24
CPNE8-206ENST00000549842 ERBB4Q15303 1308 aa7.3□□□□□ -1.24
CPNE8-206ENST00000549842 ATG7O95352 703 aa7.3□□□□□ -1.24
CPNE8-206ENST00000549842 VEGFBP49765 207 aa7.3□□□□□ -1.24
CPNE8-206ENST00000549842 MFAP1P55081 439 aaKnown RBP7.3□□□□□ -1.24
CPNE8-206ENST00000549842 DPYDQ12882 1025 aa7.3□□□□□ -1.24
CPNE8-206ENST00000549842 LCE2CQ5TA81 110 aa7.3□□□□□ -1.24
CPNE8-206ENST00000549842 SV2AQ7L0J3 742 aa7.3□□□□□ -1.24
CPNE8-206ENST00000549842 STAG2Q8N3U4 1231 aa7.3□□□□□ -1.24
CPNE8-206ENST00000549842 RGS22Q8NE09 1264 aa7.3□□□□□ -1.24
CPNE8-206ENST00000549842 SFI1A8K8P3 1242 aa7.29□□□□□ -1.24
CPNE8-206ENST00000549842 TNS4Q8IZW8 715 aa7.29□□□□□ -1.24
CPNE8-206ENST00000549842 ZDHHC3Q9NYG2 299 aa7.29□□□□□ -1.24
CPNE8-206ENST00000549842 MSX1P28360 303 aa7.28□□□□□ -1.24
CPNE8-206ENST00000549842 HIRAP54198 1017 aaPredicted RBP7.28□□□□□ -1.24
CPNE8-206ENST00000549842 DBN1Q16643 649 aa7.28□□□□□ -1.24
CPNE8-206ENST00000549842 SLC9A9Q8IVB4 645 aa7.28□□□□□ -1.24
CPNE8-206ENST00000549842 VWA5B2Q8N398 1253 aa7.28□□□□□ -1.24
CPNE8-206ENST00000549842 CRISPLD1Q9H336 500 aa7.28□□□□□ -1.24
CPNE8-206ENST00000549842 CUEDC1Q9NWM3 386 aaPredicted RBP7.28□□□□□ -1.24
CPNE8-206ENST00000549842 USP3Q9Y6I4 520 aa7.28□□□□□ -1.24
CPNE8-206ENST00000549842 NOS2P35228 1153 aa7.27□□□□□ -1.25
CPNE8-206ENST00000549842 PHKA2P46019 1235 aa7.27□□□□□ -1.25
CPNE8-206ENST00000549842 PSMA6P60900 246 aaKnown RBP7.27□□□□□ -1.25
CPNE8-206ENST00000549842 TSEN2Q8NCE0 465 aaKnown RBP7.27□□□□□ -1.25
CPNE8-206ENST00000549842 FAM200AQ8TCP9 573 aa7.27□□□□□ -1.25
CPNE8-206ENST00000549842 GAS2L1Q99501 681 aaPredicted RBP7.27□□□□□ -1.25
CPNE8-206ENST00000549842 GPC6Q9Y625 555 aaPredicted RBP7.27□□□□□ -1.25
CPNE8-206ENST00000549842 GMPRP36959 345 aa7.26□□□□□ -1.25
CPNE8-206ENST00000549842 PLA2G4AP47712 749 aa7.26□□□□□ -1.25
CPNE8-206ENST00000549842 NBPF1Q3BBV0 1214 aa7.26□□□□□ -1.25
CPNE8-206ENST00000549842 GPR161Q8N6U8 529 aaKnown RBP7.26□□□□□ -1.25
CPNE8-206ENST00000549842 ZDHHC1Q8WTX9 485 aa7.26□□□□□ -1.25
CPNE8-206ENST00000549842 ZNF837Q96EG3 531 aaPredicted RBP7.26□□□□□ -1.25
CPNE8-206ENST00000549842 CABP1Q9NZU7 370 aa7.26□□□□□ -1.25
CPNE8-206ENST00000549842 MTMR7Q9Y216 660 aa7.26□□□□□ -1.25
CPNE8-206ENST00000549842 ATAD2Q6PL18 1390 aa7.25□□□□□ -1.25
CPNE8-206ENST00000549842 SERTM1A2A2V5 107 aa7.25□□□□□ -1.25
CPNE8-206ENST00000549842 IGFBP4P22692 258 aa7.25□□□□□ -1.25
CPNE8-206ENST00000549842 SWI5Q1ZZU3 235 aa7.25□□□□□ -1.25
CPNE8-206ENST00000549842 C1orf53Q5VUE5 145 aa7.25□□□□□ -1.25
CPNE8-206ENST00000549842 FOXR1Q6PIV2 292 aa7.25□□□□□ -1.25
CPNE8-206ENST00000549842 RIPOR1Q6ZS17 1223 aa7.25□□□□□ -1.25
CPNE8-206ENST00000549842 NLRP8Q86W28 1048 aa7.25□□□□□ -1.25
CPNE8-206ENST00000549842 PGBD3Q8N328 593 aa7.25□□□□□ -1.25
CPNE8-206ENST00000549842 L3MBTL2Q969R5 705 aa7.25□□□□□ -1.25
CPNE8-206ENST00000549842 CFHR5Q9BXR6 569 aa7.25□□□□□ -1.25
CPNE8-206ENST00000549842 NUCKS1Q9H1E3 243 aaKnown RBP7.25□□□□□ -1.25
CPNE8-206ENST00000549842 TSPAN10Q9H1Z9 355 aaPredicted RBP7.25□□□□□ -1.25
CPNE8-206ENST00000549842 NOVA2Q9UNW9 492 aaKnown RBP7.25□□□□□ -1.25
CPNE8-206ENST00000549842 EML1O00423 815 aa7.24□□□□□ -1.25
CPNE8-206ENST00000549842 C21orf2O43822 256 aa7.24□□□□□ -1.25
CPNE8-206ENST00000549842 TATP17735 454 aaPredicted RBP7.24□□□□□ -1.25
CPNE8-206ENST00000549842 ATP4AP20648 1035 aa7.24□□□□□ -1.25
CPNE8-206ENST00000549842 UBAP2LQ14157 1087 aaKnown RBP7.24□□□□□ -1.25
CPNE8-206ENST00000549842 CDCA8Q53HL2 280 aa7.24□□□□□ -1.25
CPNE8-206ENST00000549842 C7orf43Q8WVR3 580 aa7.24□□□□□ -1.25
CPNE8-206ENST00000549842 CHMP3Q9Y3E7 222 aa7.24□□□□□ -1.25
CPNE8-206ENST00000549842 CDC14CA4D256 554 aa7.23□□□□□ -1.25
CPNE8-206ENST00000549842 THBS1P07996 1170 aa7.23□□□□□ -1.25
CPNE8-206ENST00000549842 WEE1P30291 646 aa7.23□□□□□ -1.25
CPNE8-206ENST00000549842 EFHC2Q5JST6 749 aa7.23□□□□□ -1.25
CPNE8-206ENST00000549842 HINFPQ9BQA5 517 aa7.23□□□□□ -1.25
CPNE8-206ENST00000549842 C2orf49Q9BVC5 232 aaPredicted RBP7.23□□□□□ -1.25
CPNE8-206ENST00000549842 PPP1R12BO60237 982 aaPredicted RBP7.22□□□□□ -1.25
CPNE8-206ENST00000549842 INSM1Q01101 510 aaPredicted RBP7.22□□□□□ -1.25
CPNE8-206ENST00000549842 FAM69CQ0P6D2 419 aa7.22□□□□□ -1.25
CPNE8-206ENST00000549842 FIGNL1Q6PIW4 674 aa7.22□□□□□ -1.25
CPNE8-206ENST00000549842 AIDAQ96BJ3 306 aa7.22□□□□□ -1.25
CPNE8-206ENST00000549842 ZIC5Q96T25 663 aa7.22□□□□□ -1.25
CPNE8-206ENST00000549842 COL25A1Q9BXS0 654 aaPredicted RBP7.22□□□□□ -1.25
CPNE8-206ENST00000549842 ZMIZ1Q9ULJ6 1067 aa7.22□□□□□ -1.25
CPNE8-206ENST00000549842 TMEM88BA6NKF7 163 aa7.21□□□□□ -1.26
CPNE8-206ENST00000549842 FOXO3O43524 673 aa7.21□□□□□ -1.26
CPNE8-206ENST00000549842 SAMD5Q5TGI4 173 aa7.21□□□□□ -1.26
CPNE8-206ENST00000549842 B4GALNT3Q6L9W6 998 aa7.21□□□□□ -1.26
CPNE8-206ENST00000549842 SCG3Q8WXD2 468 aaKnown RBP7.21□□□□□ -1.26
CPNE8-206ENST00000549842 GTPBP3Q969Y2 492 aaKnown RBP7.21□□□□□ -1.26
CPNE8-206ENST00000549842 TRERF1Q96PN7 1200 aa7.21□□□□□ -1.26
CPNE8-206ENST00000549842 RUBCNLQ9H714 662 aa7.21□□□□□ -1.26
CPNE8-206ENST00000549842 GPAMQ9HCL2 828 aa7.21□□□□□ -1.26
CPNE8-206ENST00000549842 PHF24Q9UPV7 400 aa7.21□□□□□ -1.26
CPNE8-206ENST00000549842 A0A1W2PNR3 127 aa7.2□□□□□ -1.26
CPNE8-206ENST00000549842 CARNS1A5YM72 827 aa7.2□□□□□ -1.26
CPNE8-206ENST00000549842 TXLNAP40222 546 aa7.2□□□□□ -1.26
CPNE8-206ENST00000549842 TBCELQ5QJ74 424 aa7.2□□□□□ -1.26
CPNE8-206ENST00000549842 NDFIP2Q9NV92 336 aa7.2□□□□□ -1.26
CPNE8-206ENST00000549842 ZNF232Q9UNY5 417 aa7.2□□□□□ -1.26
CPNE8-206ENST00000549842 PARP3Q9Y6F1 533 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms