RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 TEFQ10587 303 aa18■□□□□ 0.47
GCN1-206ENST00000549815 TTC5Q8N0Z6 440 aa18■□□□□ 0.47
GCN1-206ENST00000549815 ZNF496Q96IT1 587 aaPredicted RBP18■□□□□ 0.47
GCN1-206ENST00000549815 NARFQ9UHQ1 456 aa18■□□□□ 0.47
GCN1-206ENST00000549815 HEG1Q9ULI3 1381 aa18■□□□□ 0.47
GCN1-206ENST00000549815 POLRMTO00411 1230 aaKnown RBP17.99■□□□□ 0.47
GCN1-206ENST00000549815 FCHSD2O94868 740 aa17.99■□□□□ 0.47
GCN1-206ENST00000549815 U2AF1L5P0DN76 240 aaPredicted RBP17.99■□□□□ 0.47
GCN1-206ENST00000549815 DPEP1P16444 411 aa17.99■□□□□ 0.47
GCN1-206ENST00000549815 U2AF1Q01081 240 aaKnown RBP eCLIP17.99■□□□□ 0.47
GCN1-206ENST00000549815 BCL2L12Q9HB09 334 aa17.99■□□□□ 0.47
GCN1-206ENST00000549815 NRXN2Q9P2S2 1712 aa17.98■□□□□ 0.47
GCN1-206ENST00000549815 ZPR1O75312 459 aa17.98■□□□□ 0.47
GCN1-206ENST00000549815 C1QTNF8P60827 252 aa17.98■□□□□ 0.47
GCN1-206ENST00000549815 AFDNP55196 1824 aaKnown RBP17.98■□□□□ 0.47
GCN1-206ENST00000549815 EIF5P55010 431 aaKnown RBP17.97■□□□□ 0.47
GCN1-206ENST00000549815 ARFGEF1Q9Y6D6 1849 aa17.96■□□□□ 0.47
GCN1-206ENST00000549815 KCNQ3O43525 872 aa17.96■□□□□ 0.47
GCN1-206ENST00000549815 STARD3NLO95772 234 aa17.96■□□□□ 0.47
GCN1-206ENST00000549815 CANXP27824 592 aaKnown RBP17.96■□□□□ 0.47
GCN1-206ENST00000549815 BCS1LQ9Y276 419 aa17.96■□□□□ 0.47
GCN1-206ENST00000549815 GIGYF1O75420 1035 aaPredicted RBP17.95■□□□□ 0.46
GCN1-206ENST00000549815 NFIXQ14938 502 aa17.95■□□□□ 0.46
GCN1-206ENST00000549815 TEX13AQ9BXU3 409 aaPredicted RBP17.95■□□□□ 0.46
GCN1-206ENST00000549815 BTBD11A6QL63 1104 aa17.94■□□□□ 0.46
GCN1-206ENST00000549815 FMNL2Q96PY5 1086 aa17.94■□□□□ 0.46
GCN1-206ENST00000549815 SCN7AQ01118 1682 aa17.93■□□□□ 0.46
GCN1-206ENST00000549815 MCM10Q7L590 875 aa17.93■□□□□ 0.46
GCN1-206ENST00000549815 A0A087WZG4 1122 aa17.92■□□□□ 0.46
GCN1-206ENST00000549815 HTATSF1O43719 755 aaKnown RBP17.92■□□□□ 0.46
GCN1-206ENST00000549815 IL6STP40189 918 aaPredicted RBP17.92■□□□□ 0.46
GCN1-206ENST00000549815 PIM2Q9P1W9 311 aa17.92■□□□□ 0.46
GCN1-206ENST00000549815 DLG5Q8TDM6 1919 aa17.92■□□□□ 0.46
GCN1-206ENST00000549815 CHRNA5P30532 468 aa17.91■□□□□ 0.46
GCN1-206ENST00000549815 DCTN1Q14203 1278 aa17.91■□□□□ 0.46
GCN1-206ENST00000549815 PLEKHF1Q96S99 279 aa17.91■□□□□ 0.46
GCN1-206ENST00000549815 DLEC1Q9Y238 1755 aa17.91■□□□□ 0.46
GCN1-206ENST00000549815 A1BGP04217 495 aa17.9■□□□□ 0.46
GCN1-206ENST00000549815 SERPINB2P05120 415 aa17.9■□□□□ 0.46
GCN1-206ENST00000549815 RTF1Q92541 710 aaKnown RBP17.9■□□□□ 0.46
GCN1-206ENST00000549815 USP16Q9Y5T5 823 aa17.9■□□□□ 0.46
GCN1-206ENST00000549815 PRAMEF22A3QJZ6 481 aa17.89■□□□□ 0.45
GCN1-206ENST00000549815 GPBP1L1Q9HC44 474 aaPredicted RBP17.89■□□□□ 0.45
GCN1-206ENST00000549815 CARMIL3Q8ND23 1372 aa17.89■□□□□ 0.45
GCN1-206ENST00000549815 BCORQ6W2J9 1755 aa17.89■□□□□ 0.45
GCN1-206ENST00000549815 DALRD3Q5D0E6 543 aaKnown RBP17.88■□□□□ 0.45
GCN1-206ENST00000549815 ARHGAP27Q6ZUM4 889 aa17.88■□□□□ 0.45
GCN1-206ENST00000549815 TBC1D2BQ9UPU7 963 aa17.88■□□□□ 0.45
GCN1-206ENST00000549815 ANKRD31Q8N7Z5 1873 aa17.87■□□□□ 0.45
GCN1-206ENST00000549815 TBC1D9BQ66K14 1250 aa17.87■□□□□ 0.45
GCN1-206ENST00000549815 ZNF526Q8TF50 670 aaPredicted RBP17.87■□□□□ 0.45
GCN1-206ENST00000549815 KDM3BQ7LBC6 1761 aa17.86■□□□□ 0.45
GCN1-206ENST00000549815 SENP3-EIF4A1A0A087X0R7 540 aa17.86■□□□□ 0.45
GCN1-206ENST00000549815 CAMTA2O94983 1202 aa17.86■□□□□ 0.45
GCN1-206ENST00000549815 BICDL1Q6ZP65 573 aa17.86■□□□□ 0.45
GCN1-206ENST00000549815 SNRPA1P09661 255 aaKnown RBP17.85■□□□□ 0.45
GCN1-206ENST00000549815 TAF7Q15545 349 aaPredicted RBP17.85■□□□□ 0.45
GCN1-206ENST00000549815 ZNF330Q9Y3S2 320 aaPredicted RBP17.85■□□□□ 0.45
GCN1-206ENST00000549815 SBF1O95248 1867 aa17.84■□□□□ 0.45
GCN1-206ENST00000549815 KIF3CO14782 793 aa17.84■□□□□ 0.45
GCN1-206ENST00000549815 PIP4K2AP48426 406 aaPredicted RBP17.84■□□□□ 0.45
GCN1-206ENST00000549815 LAMB4A4D0S4 1761 aa17.84■□□□□ 0.45
GCN1-206ENST00000549815 NBPF26B4DH59 902 aa17.83■□□□□ 0.44
GCN1-206ENST00000549815 RALBP1Q15311 655 aa17.83■□□□□ 0.44
GCN1-206ENST00000549815 NFE2L2Q16236 605 aa17.83■□□□□ 0.44
GCN1-206ENST00000549815 NBPF10Q6P3W6 841 aaKnown RBP17.83■□□□□ 0.44
GCN1-206ENST00000549815 DZIP3Q86Y13 1208 aaKnown RBP17.83■□□□□ 0.44
GCN1-206ENST00000549815 NBPF15Q8N660 670 aa17.83■□□□□ 0.44
GCN1-206ENST00000549815 MIS18AQ9NYP9 233 aa17.83■□□□□ 0.44
GCN1-206ENST00000549815 COL11A2P13942 1736 aaPredicted RBP17.82■□□□□ 0.44
GCN1-206ENST00000549815 C9orf131Q5VYM1 1079 aa17.82■□□□□ 0.44
GCN1-206ENST00000549815 PRR5LQ6MZQ0 368 aa17.82■□□□□ 0.44
GCN1-206ENST00000549815 CEP350Q5VT06 3117 aa17.81■□□□□ 0.44
GCN1-206ENST00000549815 NEFMP07197 916 aa17.81■□□□□ 0.44
GCN1-206ENST00000549815 C2CD5Q86YS7 1000 aa17.81■□□□□ 0.44
GCN1-206ENST00000549815 DDX10Q13206 875 aaKnown RBP17.8■□□□□ 0.44
GCN1-206ENST00000549815 PNISRQ8TF01 805 aaKnown RBP17.8■□□□□ 0.44
GCN1-206ENST00000549815 BRIP1Q9BX63 1249 aa17.8■□□□□ 0.44
GCN1-206ENST00000549815 H0YIN7 160 aa17.79■□□□□ 0.44
GCN1-206ENST00000549815 CLEC4GQ6UXB4 293 aa17.79■□□□□ 0.44
GCN1-206ENST00000549815 NPM2Q86SE8 214 aaKnown RBP17.79■□□□□ 0.44
GCN1-206ENST00000549815 CCDC24Q8N4L8 307 aa17.79■□□□□ 0.44
GCN1-206ENST00000549815 TTLL6Q8N841 843 aa17.79■□□□□ 0.44
GCN1-206ENST00000549815 THUMPD2Q9BTF0 503 aaKnown RBP17.79■□□□□ 0.44
GCN1-206ENST00000549815 PNNQ9H307 717 aaKnown RBP17.79■□□□□ 0.44
GCN1-206ENST00000549815 RGL2O15211 777 aa17.78■□□□□ 0.44
GCN1-206ENST00000549815 PRELPP51888 382 aa17.78■□□□□ 0.44
GCN1-206ENST00000549815 EIF4A1P60842 406 aaKnown RBP17.78■□□□□ 0.44
GCN1-206ENST00000549815 SETDB2Q96T68 719 aa17.78■□□□□ 0.44
GCN1-206ENST00000549815 PDZRN3Q9UPQ7 1066 aa17.78■□□□□ 0.44
GCN1-206ENST00000549815 MAPK8IP3Q9UPT6 1336 aa17.77■□□□□ 0.44
GCN1-206ENST00000549815 PDE6BP35913 854 aa17.77■□□□□ 0.44
GCN1-206ENST00000549815 RASSF7Q02833 373 aa17.77■□□□□ 0.44
GCN1-206ENST00000549815 RNF181Q9P0P0 153 aa17.77■□□□□ 0.44
GCN1-206ENST00000549815 MYBBP1AQ9BQG0 1328 aaKnown RBP17.76■□□□□ 0.43
GCN1-206ENST00000549815 CNBD1Q8NA66 436 aa17.76■□□□□ 0.43
GCN1-206ENST00000549815 NMRK2Q9NPI5 230 aa17.76■□□□□ 0.43
GCN1-206ENST00000549815 ARFGEF2Q9Y6D5 1785 aa17.74■□□□□ 0.43
GCN1-206ENST00000549815 FER1L6Q2WGJ9 1857 aa17.74■□□□□ 0.43
GCN1-206ENST00000549815 CCDC88AQ3V6T2 1871 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 184.8 ms