RNA–Protein interactions for RNA: ENST00000549760.1

RAB3IP-211, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-211ENST00000549760 POLRMTO00411 1230 aaKnown RBP28.31■■■□□ 2.12
RAB3IP-211ENST00000549760 KIF3CO14782 793 aa28.31■■■□□ 2.12
RAB3IP-211ENST00000549760 PIM2Q9P1W9 311 aa28.31■■■□□ 2.12
RAB3IP-211ENST00000549760 ZBTB1Q9Y2K1 713 aa28.31■■■□□ 2.12
RAB3IP-211ENST00000549760 U2SURPO15042 1029 aaKnown RBP28.3■■■□□ 2.12
RAB3IP-211ENST00000549760 HSPA6P17066 643 aa28.3■■■□□ 2.12
RAB3IP-211ENST00000549760 SBF1O95248 1867 aa28.29■■■□□ 2.12
RAB3IP-211ENST00000549760 SCN7AQ01118 1682 aa28.29■■■□□ 2.12
RAB3IP-211ENST00000549760 TM4SF1P30408 202 aa28.29■■■□□ 2.12
RAB3IP-211ENST00000549760 VSIG10Q8N0Z9 540 aa28.29■■■□□ 2.12
RAB3IP-211ENST00000549760 DALRD3Q5D0E6 543 aaKnown RBP28.28■■■□□ 2.12
RAB3IP-211ENST00000549760 CHRNA5P30532 468 aa28.27■■■□□ 2.12
RAB3IP-211ENST00000549760 TTC5Q8N0Z6 440 aa28.27■■■□□ 2.12
RAB3IP-211ENST00000549760 NARFQ9UHQ1 456 aa28.27■■■□□ 2.12
RAB3IP-211ENST00000549760 GAS2L2Q8NHY3 880 aa28.25■■■□□ 2.11
RAB3IP-211ENST00000549760 TEFQ10587 303 aa28.24■■■□□ 2.11
RAB3IP-211ENST00000549760 NFIXQ14938 502 aa28.24■■■□□ 2.11
RAB3IP-211ENST00000549760 GNAT3A8MTJ3 354 aa28.23■■■□□ 2.11
RAB3IP-211ENST00000549760 C9orf131Q5VYM1 1079 aa28.23■■■□□ 2.11
RAB3IP-211ENST00000549760 CANXP27824 592 aaKnown RBP28.22■■■□□ 2.11
RAB3IP-211ENST00000549760 TNRC6CQ9HCJ0 1690 aaKnown RBP28.22■■■□□ 2.11
RAB3IP-211ENST00000549760 STARD3NLO95772 234 aa28.21■■■□□ 2.11
RAB3IP-211ENST00000549760 BCL2L12Q9HB09 334 aa28.21■■■□□ 2.11
RAB3IP-211ENST00000549760 HEG1Q9ULI3 1381 aa28.21■■■□□ 2.11
RAB3IP-211ENST00000549760 ANKRD31Q8N7Z5 1873 aa28.2■■■□□ 2.1
RAB3IP-211ENST00000549760 ZNF790Q6PG37 636 aa28.19■■■□□ 2.1
RAB3IP-211ENST00000549760 IL17REQ8NFR9 667 aa28.19■■■□□ 2.1
RAB3IP-211ENST00000549760 ZNF496Q96IT1 587 aaPredicted RBP28.19■■■□□ 2.1
RAB3IP-211ENST00000549760 NMRK2Q9NPI5 230 aa28.19■■■□□ 2.1
RAB3IP-211ENST00000549760 BCORQ6W2J9 1755 aa28.19■■■□□ 2.1
RAB3IP-211ENST00000549760 SERPINB2P05120 415 aa28.18■■■□□ 2.1
RAB3IP-211ENST00000549760 CFAP53Q96M91 514 aa28.18■■■□□ 2.1
RAB3IP-211ENST00000549760 RNF181Q9P0P0 153 aa28.18■■■□□ 2.1
RAB3IP-211ENST00000549760 CCDC88AQ3V6T2 1871 aa28.18■■■□□ 2.1
RAB3IP-211ENST00000549760 TIAM2Q8IVF5 1701 aa28.18■■■□□ 2.1
RAB3IP-211ENST00000549760 TOMM70O94826 608 aa28.17■■■□□ 2.1
RAB3IP-211ENST00000549760 CARMIL3Q8ND23 1372 aa28.16■■■□□ 2.1
RAB3IP-211ENST00000549760 CEMIPQ8WUJ3 1361 aa28.16■■■□□ 2.1
RAB3IP-211ENST00000549760 COL11A2P13942 1736 aaPredicted RBP28.16■■■□□ 2.1
RAB3IP-211ENST00000549760 EIF5P55010 431 aaKnown RBP28.16■■■□□ 2.1
RAB3IP-211ENST00000549760 A0A087WZG4 1122 aa28.15■■■□□ 2.1
RAB3IP-211ENST00000549760 PRKAR2BP31323 418 aa28.15■■■□□ 2.1
RAB3IP-211ENST00000549760 TEX13AQ9BXU3 409 aaPredicted RBP28.14■■■□□ 2.1
RAB3IP-211ENST00000549760 ZNF330Q9Y3S2 320 aaPredicted RBP28.14■■■□□ 2.1
RAB3IP-211ENST00000549760 WDR90Q96KV7 1748 aa28.14■■■□□ 2.1
RAB3IP-211ENST00000549760 CACNA1SQ13698 1873 aa28.13■■■□□ 2.09
RAB3IP-211ENST00000549760 BICDL1Q6ZP65 573 aa28.13■■■□□ 2.09
RAB3IP-211ENST00000549760 FMNL2Q96PY5 1086 aa28.13■■■□□ 2.09
RAB3IP-211ENST00000549760 RSPH6AQ9H0K4 717 aa28.13■■■□□ 2.09
RAB3IP-211ENST00000549760 PHACTR3Q96KR7 559 aa28.12■■■□□ 2.09
RAB3IP-211ENST00000549760 KDM2BQ8NHM5 1336 aa28.12■■■□□ 2.09
RAB3IP-211ENST00000549760 RASSF7Q02833 373 aa28.11■■■□□ 2.09
RAB3IP-211ENST00000549760 C2CD5Q86YS7 1000 aa28.1■■■□□ 2.09
RAB3IP-211ENST00000549760 C16orf71Q8IYS4 520 aaPredicted RBP28.1■■■□□ 2.09
RAB3IP-211ENST00000549760 NUDCQ9Y266 331 aa28.1■■■□□ 2.09
RAB3IP-211ENST00000549760 IL6STP40189 918 aaPredicted RBP28.09■■■□□ 2.09
RAB3IP-211ENST00000549760 APLP1P51693 650 aa28.09■■■□□ 2.09
RAB3IP-211ENST00000549760 TBC1D9BQ66K14 1250 aa28.09■■■□□ 2.09
RAB3IP-211ENST00000549760 BTBD11A6QL63 1104 aa28.08■■■□□ 2.09
RAB3IP-211ENST00000549760 TTLL6Q8N841 843 aa28.08■■■□□ 2.09
RAB3IP-211ENST00000549760 TBC1D2BQ9UPU7 963 aa28.08■■■□□ 2.09
RAB3IP-211ENST00000549760 H0YIN7 160 aa28.07■■■□□ 2.08
RAB3IP-211ENST00000549760 RBM46Q8TBY0 533 aaKnown RBP28.07■■■□□ 2.08
RAB3IP-211ENST00000549760 ARFGEF2Q9Y6D5 1785 aa28.06■■■□□ 2.08
RAB3IP-211ENST00000549760 U2AF1L5P0DN76 240 aaPredicted RBP28.06■■■□□ 2.08
RAB3IP-211ENST00000549760 PPP2R1AP30153 589 aa28.06■■■□□ 2.08
RAB3IP-211ENST00000549760 U2AF1Q01081 240 aaKnown RBP eCLIP28.06■■■□□ 2.08
RAB3IP-211ENST00000549760 NPM2Q86SE8 214 aaKnown RBP28.06■■■□□ 2.08
RAB3IP-211ENST00000549760 ZC3H4Q9UPT8 1303 aaKnown RBP28.06■■■□□ 2.08
RAB3IP-211ENST00000549760 FER1L6Q2WGJ9 1857 aa28.06■■■□□ 2.08
RAB3IP-211ENST00000549760 LAMB4A4D0S4 1761 aa28.05■■■□□ 2.08
RAB3IP-211ENST00000549760 KCNQ3O43525 872 aa28.05■■■□□ 2.08
RAB3IP-211ENST00000549760 A1BGP04217 495 aa28.05■■■□□ 2.08
RAB3IP-211ENST00000549760 DLG5Q8TDM6 1919 aa28.05■■■□□ 2.08
RAB3IP-211ENST00000549760 DICER1Q9UPY3 1922 aaKnown RBP28.05■■■□□ 2.08
RAB3IP-211ENST00000549760 LMNB1P20700 586 aa28.03■■■□□ 2.08
RAB3IP-211ENST00000549760 RTF1Q92541 710 aaKnown RBP28.03■■■□□ 2.08
RAB3IP-211ENST00000549760 PRR5LQ6MZQ0 368 aa28.02■■■□□ 2.08
RAB3IP-211ENST00000549760 RRAGCQ9HB90 399 aa28.02■■■□□ 2.08
RAB3IP-211ENST00000549760 CAMTA2O94983 1202 aa28.01■■■□□ 2.07
RAB3IP-211ENST00000549760 PDE6BP35913 854 aa28.01■■■□□ 2.07
RAB3IP-211ENST00000549760 MCM10Q7L590 875 aa28.01■■■□□ 2.07
RAB3IP-211ENST00000549760 PDZRN3Q9UPQ7 1066 aa28.01■■■□□ 2.07
RAB3IP-211ENST00000549760 DZIP3Q86Y13 1208 aaKnown RBP28■■■□□ 2.07
RAB3IP-211ENST00000549760 CCDC24Q8N4L8 307 aa28■■■□□ 2.07
RAB3IP-211ENST00000549760 ZNF622Q969S3 477 aaKnown RBP eCLIP28■■■□□ 2.07
RAB3IP-211ENST00000549760 BRIP1Q9BX63 1249 aa28■■■□□ 2.07
RAB3IP-211ENST00000549760 NPHP1O15259 732 aa27.99■■■□□ 2.07
RAB3IP-211ENST00000549760 PRELPP51888 382 aa27.99■■■□□ 2.07
RAB3IP-211ENST00000549760 FSTL1Q12841 308 aa27.99■■■□□ 2.07
RAB3IP-211ENST00000549760 CNBD1Q8NA66 436 aa27.99■■■□□ 2.07
RAB3IP-211ENST00000549760 SETDB2Q96T68 719 aa27.99■■■□□ 2.07
RAB3IP-211ENST00000549760 SLX4Q8IY92 1834 aa27.98■■■□□ 2.07
RAB3IP-211ENST00000549760 NFKBIEO00221 500 aa27.98■■■□□ 2.07
RAB3IP-211ENST00000549760 USP16Q9Y5T5 823 aa27.98■■■□□ 2.07
RAB3IP-211ENST00000549760 KDM3BQ7LBC6 1761 aa27.97■■■□□ 2.07
RAB3IP-211ENST00000549760 PIP4K2AP48426 406 aaPredicted RBP27.97■■■□□ 2.07
RAB3IP-211ENST00000549760 IFFO2Q5TF58 517 aa27.97■■■□□ 2.07
RAB3IP-211ENST00000549760 PRAMEF22A3QJZ6 481 aa27.96■■■□□ 2.07
RAB3IP-211ENST00000549760 SNRPA1P09661 255 aaKnown RBP27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms