RNA–Protein interactions for RNA: ENST00000549757.5

SMARCC2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,062 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-207ENST00000549757 PIP4K2BP78356 416 aa8.05□□□□□ -1.12
SMARCC2-207ENST00000549757 ZNF644Q9H582 1327 aaPredicted RBP8.04□□□□□ -1.12
SMARCC2-207ENST00000549757 KDM5DQ9BY66 1539 aa8.04□□□□□ -1.12
SMARCC2-207ENST00000549757 DNMT1P26358 1616 aaKnown RBP8.04□□□□□ -1.12
SMARCC2-207ENST00000549757 POLR1AO95602 1720 aaPredicted RBP8.04□□□□□ -1.12
SMARCC2-207ENST00000549757 ZBBXA8MT70 800 aa8.04□□□□□ -1.12
SMARCC2-207ENST00000549757 KIF3BO15066 747 aa8.04□□□□□ -1.12
SMARCC2-207ENST00000549757 CAPN5O15484 640 aaPredicted RBP8.04□□□□□ -1.12
SMARCC2-207ENST00000549757 FBXO45P0C2W1 286 aa8.04□□□□□ -1.12
SMARCC2-207ENST00000549757 MCM6Q14566 821 aa8.04□□□□□ -1.12
SMARCC2-207ENST00000549757 PROSER2Q86WR7 435 aaPredicted RBP8.04□□□□□ -1.12
SMARCC2-207ENST00000549757 SLC10A4Q96EP9 437 aa8.04□□□□□ -1.12
SMARCC2-207ENST00000549757 ATP13A2Q9NQ11 1180 aa8.04□□□□□ -1.12
SMARCC2-207ENST00000549757 CDV3Q9UKY7 258 aaKnown RBP8.04□□□□□ -1.12
SMARCC2-207ENST00000549757 TNRQ92752 1358 aa8.04□□□□□ -1.12
SMARCC2-207ENST00000549757 RTEL1-TNFRSF6BF6WH68 1400 aa8.03□□□□□ -1.12
SMARCC2-207ENST00000549757 CAMSAP2Q08AD1 1489 aa8.03□□□□□ -1.12
SMARCC2-207ENST00000549757 CCDC141Q6ZP82 1450 aa8.03□□□□□ -1.12
SMARCC2-207ENST00000549757 DHX29Q7Z478 1369 aaKnown RBP8.03□□□□□ -1.12
SMARCC2-207ENST00000549757 WDR4P57081 412 aaKnown RBP8.03□□□□□ -1.12
SMARCC2-207ENST00000549757 FNBP4Q8N3X1 1017 aaPredicted RBP8.03□□□□□ -1.12
SMARCC2-207ENST00000549757 KCTD15Q96SI1 283 aaPredicted RBP8.03□□□□□ -1.12
SMARCC2-207ENST00000549757 GMPR2Q9P2T1 348 aaKnown RBP8.03□□□□□ -1.12
SMARCC2-207ENST00000549757 TBC1D2BQ9UPU7 963 aa8.03□□□□□ -1.12
SMARCC2-207ENST00000549757 CPS1P31327 1500 aa8.03□□□□□ -1.12
SMARCC2-207ENST00000549757 CEP162Q5TB80 1403 aa8.03□□□□□ -1.12
SMARCC2-207ENST00000549757 WASHC2CQ9Y4E1 1318 aa8.03□□□□□ -1.12
SMARCC2-207ENST00000549757 MBD5Q9P267 1494 aa8.02□□□□□ -1.13
SMARCC2-207ENST00000549757 TOM1O60784 492 aa8.02□□□□□ -1.13
SMARCC2-207ENST00000549757 ZNF787Q6DD87 383 aa8.02□□□□□ -1.13
SMARCC2-207ENST00000549757 TRIM46Q7Z4K8 759 aa8.02□□□□□ -1.13
SMARCC2-207ENST00000549757 ITPKCQ96DU7 683 aa8.02□□□□□ -1.13
SMARCC2-207ENST00000549757 USP35Q9P2H5 1018 aa8.02□□□□□ -1.13
SMARCC2-207ENST00000549757 PZPP20742 1482 aa8.01□□□□□ -1.13
SMARCC2-207ENST00000549757 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.01□□□□□ -1.13
SMARCC2-207ENST00000549757 NR1H3Q13133 447 aa8.01□□□□□ -1.13
SMARCC2-207ENST00000549757 ANKLE2Q86XL3 938 aa8.01□□□□□ -1.13
SMARCC2-207ENST00000549757 CCDC116Q8IYX3 515 aa8.01□□□□□ -1.13
SMARCC2-207ENST00000549757 ZFAND3Q9H8U3 227 aa8.01□□□□□ -1.13
SMARCC2-207ENST00000549757 AMOTL2Q9Y2J4 779 aa8.01□□□□□ -1.13
SMARCC2-207ENST00000549757 FAM135AQ9P2D6 1515 aa8.01□□□□□ -1.13
SMARCC2-207ENST00000549757 UGGT1Q9NYU2 1555 aa8.01□□□□□ -1.13
SMARCC2-207ENST00000549757 SHANK2Q9UPX8 1470 aa8□□□□□ -1.13
SMARCC2-207ENST00000549757 ESPNB1AK53 854 aa8□□□□□ -1.13
SMARCC2-207ENST00000549757 ZIC2O95409 532 aaPredicted RBP8□□□□□ -1.13
SMARCC2-207ENST00000549757 TSPY4P0CV99 314 aa8□□□□□ -1.13
SMARCC2-207ENST00000549757 TSPY10P0CW01 314 aa8□□□□□ -1.13
SMARCC2-207ENST00000549757 BMP1P13497 986 aa8□□□□□ -1.13
SMARCC2-207ENST00000549757 INTS6LQ5JSJ4 861 aaKnown RBP8□□□□□ -1.13
SMARCC2-207ENST00000549757 THEMISQ8N1K5 641 aaPredicted RBP8□□□□□ -1.13
SMARCC2-207ENST00000549757 MED1Q15648 1581 aaPredicted RBP8□□□□□ -1.13
SMARCC2-207ENST00000549757 NEURL4Q96JN8 1562 aa8□□□□□ -1.13
SMARCC2-207ENST00000549757 NCOA2Q15596 1464 aa8□□□□□ -1.13
SMARCC2-207ENST00000549757 NLRP1Q9C000 1473 aa8□□□□□ -1.13
SMARCC2-207ENST00000549757 HSPA1LP34931 641 aa7.99□□□□□ -1.13
SMARCC2-207ENST00000549757 DZIP3Q86Y13 1208 aaKnown RBP7.99□□□□□ -1.13
SMARCC2-207ENST00000549757 NPHP4O75161 1426 aaPredicted RBP7.98□□□□□ -1.13
SMARCC2-207ENST00000549757 MIA2Q96PC5 1412 aa7.98□□□□□ -1.13
SMARCC2-207ENST00000549757 NBPF20Q3BBV1 942 aa7.98□□□□□ -1.13
SMARCC2-207ENST00000549757 PPP1R26Q5T8A7 1209 aaPredicted RBP7.98□□□□□ -1.13
SMARCC2-207ENST00000549757 FAM177A1Q8N128 213 aaPredicted RBP7.98□□□□□ -1.13
SMARCC2-207ENST00000549757 EMILIN1Q9Y6C2 1016 aa7.98□□□□□ -1.13
SMARCC2-207ENST00000549757 IQGAP1P46940 1657 aa7.98□□□□□ -1.13
SMARCC2-207ENST00000549757 ARHGEF5Q12774 1597 aa7.97□□□□□ -1.13
SMARCC2-207ENST00000549757 PATL2C9JE40 543 aaKnown RBP7.97□□□□□ -1.13
SMARCC2-207ENST00000549757 TRIM47Q96LD4 638 aa7.97□□□□□ -1.13
SMARCC2-207ENST00000549757 ZC3H13Q5T200 1668 aaKnown RBP7.97□□□□□ -1.13
SMARCC2-207ENST00000549757 VWDEQ8N2E2 1590 aa7.97□□□□□ -1.13
SMARCC2-207ENST00000549757 DEPDC5O75140 1603 aa7.96□□□□□ -1.13
SMARCC2-207ENST00000549757 MRPL14Q6P1L8 145 aaKnown RBP7.96□□□□□ -1.14
SMARCC2-207ENST00000549757 MEIOBQ8N635 442 aa7.96□□□□□ -1.14
SMARCC2-207ENST00000549757 GDPD2Q9HCC8 539 aa7.96□□□□□ -1.14
SMARCC2-207ENST00000549757 PCDHB9Q9Y5E1 797 aa7.96□□□□□ -1.14
SMARCC2-207ENST00000549757 ABCC3O15438 1527 aa7.95□□□□□ -1.14
SMARCC2-207ENST00000549757 GIGYF1O75420 1035 aaPredicted RBP7.95□□□□□ -1.14
SMARCC2-207ENST00000549757 SNRPBP14678 240 aaKnown RBP7.95□□□□□ -1.14
SMARCC2-207ENST00000549757 DHX9Q08211 1270 aaKnown RBP7.95□□□□□ -1.14
SMARCC2-207ENST00000549757 Q6ZVU0 165 aa7.95□□□□□ -1.14
SMARCC2-207ENST00000549757 SENP2Q9HC62 589 aa7.95□□□□□ -1.14
SMARCC2-207ENST00000549757 PRM3Q9NNZ6 103 aa7.95□□□□□ -1.14
SMARCC2-207ENST00000549757 COG6Q9Y2V7 657 aa7.95□□□□□ -1.14
SMARCC2-207ENST00000549757 SYNMO15061 1565 aa7.95□□□□□ -1.14
SMARCC2-207ENST00000549757 RNF17Q9BXT8 1623 aaKnown RBP7.95□□□□□ -1.14
SMARCC2-207ENST00000549757 MED14O60244 1454 aa7.94□□□□□ -1.14
SMARCC2-207ENST00000549757 EIF2AK4Q9P2K8 1649 aaKnown RBP7.94□□□□□ -1.14
SMARCC2-207ENST00000549757 C11orf95C9JLR9 678 aaPredicted RBP7.94□□□□□ -1.14
SMARCC2-207ENST00000549757 ERVH48-1M5A8F1 160 aa7.94□□□□□ -1.14
SMARCC2-207ENST00000549757 SEPT12Q8IYM1 358 aa7.94□□□□□ -1.14
SMARCC2-207ENST00000549757 KIFC2Q96AC6 838 aa7.94□□□□□ -1.14
SMARCC2-207ENST00000549757 ZFP42Q96MM3 310 aa7.94□□□□□ -1.14
SMARCC2-207ENST00000549757 TMPRSS4Q9NRS4 437 aa7.94□□□□□ -1.14
SMARCC2-207ENST00000549757 CEP152O94986 1710 aa7.94□□□□□ -1.14
SMARCC2-207ENST00000549757 ERVK-7P63135 1459 aa7.94□□□□□ -1.14
SMARCC2-207ENST00000549757 MAST1Q9Y2H9 1570 aa7.93□□□□□ -1.14
SMARCC2-207ENST00000549757 PPP1R15AO75807 674 aaPredicted RBP7.93□□□□□ -1.14
SMARCC2-207ENST00000549757 MCCD1P59942 119 aaPredicted RBP7.93□□□□□ -1.14
SMARCC2-207ENST00000549757 CBLBQ13191 982 aa7.93□□□□□ -1.14
SMARCC2-207ENST00000549757 POM121Q96HA1 1249 aa7.93□□□□□ -1.14
SMARCC2-207ENST00000549757 PGPEP1Q9NXJ5 209 aa7.93□□□□□ -1.14
SMARCC2-207ENST00000549757 LRRC9Q6ZRR7 1453 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms